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3 protocols using percp cy5.5 conjugated anti ifn γ

1

Examining T cell subsets in CNS-infiltrating immune cells

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Cells cultured or obtained from mice were incubated for 4 hours with Phorbol 12-myristate 13-acetate (PMA) (100 ng/mL, Sigma, St Louis, MO, USA) and ionomycin (1 μM, Sigma, St Louis, MO, USA) in the presence of Brefeldin A and Monensin (eBioscience, San Diego, CA, USA). The stimulated T cells were treated in Fix/Permeabilization buffer. PE- or APC-conjugated anti-IL-17A (Biolegend), PerCP/Cy5.5-conjugated anti-IFN-γ (Biolegend), PE-conjugated anti-RORγt, eFlour 450-conjugated anti-Foxp3 (eBioscience), Alexa Flour 488-conjugated anti-STAT3 phospho(Tyr705) (Biolegend) were used for intracellular staining. To analyze CNS-infiltrating immune cells, lymphoid cells from CNS were stained with PE/Cy7-conjugated anti-CD4 (eBioscience), PE-conjugated anti-GM-CSF (Biolegend), PerCP/Cy5.5-conjugated anti-IFN-γ (Biolegend), and Alexa Flour 488-conjugated anti-IL-17A (Biolegend). Samples were analyzed using the FACSVerse flow cytometer (BD Bioscience, San Jose, CA) and data were analyzed through the FlowJo software (TreeStar, Ashland, OR) [34 (link)].
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2

Influenza Virus Infection and T cell Response

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Suspensions of 1 × 106 splenocytes were seeded in 100 μl RPMI medium in 96-well round bottom plates and infected by wt or receptor mutants of DK/96 or SC/18 virus at a multiplicity of infection (MOI) of 0.1, as described (Jeisy-Scott et al., 2012 (link)). After 1 h incubation with the virus, 50 μl RPMI containing 40% FBS and 400 U/ml Penicillin and 400 μg/ml streptomycin solution was added. Four days post-infection, the cells were collected and re-stimulated with plate-bound anti-CD3 (10 μg/ml; clone 145-2C11; eBioscience, San Diego, CA), and anti-CD28 (2 μg/ml, clone 37.51; eBioscience) for 6 h in the presence of BD GolgiStop™ and GolgiPlug™ protein transport inhibitors (BD Bioscience, San Jose, CA) to enhance intracellular cytokine staining. Cells were surface stained with PE-Cy™7-conjugated anti-CD4 (clone GK1.5; eBioscience) and Alexa Fluor 700-conjugated anti-CD8 (53-6.7; BD Bioscience) for 20 min at 4 °C. Cells were then made permeable with Cytofix/Cytoperm (BD Bioscience) followed by intracellular staining with PerCP-Cy5.5-conjugated anti-IFN-γ (BioLegend, San Diego, CA) for 45 min at 4 °C. Cells were washed twice with perm/wash and re-suspended in PBS/10% FBS. Samples were analyzed using an LSR II flow cytometer (BD Biosciences, Sam Jose, CA), and the cytometry data were analyzed using FlowJo software (TreeStar, Ashland, OR).
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3

Multiparametric Flow Cytometry Immunophenotyping

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Fluorescein isothiocyanate (FITC)-conjugated anti-CD4, allophycocyanin (APC)-conjugated anti-CD8, APC-Cy7-conjugated anti-HLA-DR, phycoerythrin (PE)-conjugated anti-ICOS, peridinin chlorophyll protein (PerCP)-conjugated anti-CD45RA, PerCP-Cy5.5-conjugated anti-IFN-γ, Brilliant Violet 421-conjugated donkey anti-rabbit IgG, and APC-Cy7/PE-Cy7-conjugated anti-CD3 were purchased from BioLegend (San Diego, CA, USA); Brilliant Violet 510-conjugated anti-IL-17 was purchased from BD Biosciences (San Diego, CA, USA); PE-Cy7-conjugated anti-IL-4 was purchased from eBioscience (San Diego, CA, USA); and rabbit anti-human LAMP-2A was purchased from Abcam (Cambridge, UK).
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