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Fanca

Manufactured by Fortis Life Sciences
Sourced in United States

The FANCA is a highly specialized lab equipment designed for precise and reliable genetic analysis. It serves as a core component in various applications, focusing on the detection and study of the FANCA gene. The FANCA equipment provides researchers with the necessary tools to investigate genetic disorders and support advancements in the field of molecular biology.

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6 protocols using fanca

1

Fanconi Anemia Pathway Protein Analysis

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Primary antibodies used were FANCA (A301-980A) (1:2000), FANCD1 (A300-005A) (1:1000), FANCD2 (A302-174A) (1:2000), FANCE (A302-125A) (1:1000), FANCI (A300-212A) (1:700), FANCM (A302-637A) (1:1000), FANCO (A302-645A) (1:1000), FANCP (A302-270A) (1:1000), FANCQ (A301-315A) (1:1000), H2AX (A300-082A) (1:5000) from Bethyl Laboratories; FANCF (PA5-18202) (1:1000), FANCG (PA5-27117) (1:1000), FANCL (PA5-19332) (1:1000), PIK3C2A (MA526505) (1:1000), and TFRC (136800) (1:1000) were from ThermoFisher; β-actin (sc-47778) (1:2000) was from Santa Cruz Biotechnology; FANCS (OP92-100UG) was from Calbiochem; γ-H2AX (NB100-78356) (1:5000) was from Novus Biologicals. Secondary antibodies used were goat anti-rabbit IgG-HRP (sc-2357) (1:5000), goat anti-mouse IgG-HRP (sc-2005) (1:5000), and goat anti-rat IgG-HRP (sc-2303) (1:5000) were from Santa Cruz Biotechnology.
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2

Western Blot Analysis of DNA Repair Proteins

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Cells were harvested and resuspended in protein extraction buffer (50 mM Na3PO4, 300 mM NaCl, 0.5% NP-40, 1 mM DTT, 1× PI cocktail). Cells were then sonicated, centrifuged at 4 °C, and supernatants were analyzed for protein concentration using the Bradford method. 20–80 μg protein were loaded in each well of a polyacrylamide gel after denaturing 5 min at 95 °C. Gels were run 1–1.5 h at 150 V then transferred to nitrocellulose membranes, blocked for 1 h with 5% milk, then probed with the following antibodies: FANCA (Bethyl-1:1000), FAAP20 (Sigma, Weidong Wang-1:250), FANCG (Santa Cruz-1:50), Actin (Santa Cruz-1:2000), H2B (Cell Signaling Technologies-1:1000), BRCA2 (Sigma, OHSU-1:500), RAD51 (BioAcademia-1:500), HSP90 (Santa Cruz-1:2000), FANCD2 (Proteintech-1:1000). Membranes were then washed 2× with TBST, probed with secondary antibody for 1 h (anti-Mouse HRP, anti-Rabbit HRP, Sigma), washed 3× with TBST, then developed using peroxide treatment and autoradiography.
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3

Whole-Cell Extract Protein Analysis

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Whole-cell extracts were prepared in lysis buffer (50 mM Tris, pH 7.5, 20 mM NaCl, 1 mM MgCl2, 0.1% SDS, protease inhibitor cocktail, and 50 U/ml Benzonase [EMD Millipore]). Western blotting analysis was performed using the following antibodies: Polη (Abcam), FANCA (Bethyl Laboratories, Inc.), FANCG (Fanconi Anemia Research Fund), MSH2 (Bethyl Laboratories, Inc.), and vinculin (Abcam).
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4

Immunoblotting of Fanconi Anemia Proteins

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Cells were lysed with 10 mM HEPES pH 8.0, 8 M Urea, 1% CHAPS, 150 mM NaCl, 1 mM EDTA, 10 mM glycine supplemented with protease cocktail inhibitor (Roche), resolved by NuPAGE (Invitrogen) gels (NuPAGE 4–12% Bis-Tris for FANCA, FANCC, FANCD2 and FANCF and NuPAGE Tris-Acetate 3–8% for BRCA2) and transferred onto nitrocellulose membrane. The following antibodies were used, FANCA (Bethyl Labs), FANCC (ID#3831, OHSU, Fanconi Anemia Antibody Project, Portland, OR, USA), BRCA2/FANCD1-1 (D0405, OHSU, Fanconi Anemia Antibody Project, Portland, OR, USA), FANCD2 (SC-20022, Santa Cruz, Dallas, TX, USA) FANCF (ab47624m, Abcam, Cambridge, MA, USA), beta-Actin (Cell Signaling Technologies, Danvers, MA, USA). Secondary antibodies were anti-mouse IgG, HRP-linked Antibody and anti-rabbit IgG, HRP-linked antibody (Cell Signaling Technologies, Danvers, MA, USA). Detection was with Supersignal West Pico PLUS chemiluminescent Substrate (Thermo Scientific, Waltham, MA,USA) using the Amersham Imager 600 (GE Healthcare Life Sciences).
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5

Antibody-based Protein Detection Assay

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Antibodies used in this study included: FAAP20 (HPA038829, Sigma-Aldrich), Flag (F1804, Sigma-Aldrich), c-Myc (9E10, Sigma-Aldrich), α-Tubulin (sc-8035, Sigma-Aldrich), FANCD2 (FI-17, Santa Cruz), PCNA (PC-10, Santa Cruz), PIN1 (A302-316A, Bethyl), FANCA (A301-980A, Bethyl), MCL-1 (A302-715A, Bethyl), γ-Tubulin (A302-631A, Bethyl), HA (6E2, Cell Signaling), ubiquitin (P4D1, Cell Signaling), β-Actin (4967, Cell Signaling), p97 (2648, Cell Signaling), pCHK1 S345 (2341, Cell Signaling), γH2AX (2577, Cell Signaling), AKT (9272, Cell Signaling), Histone H4 (07–108, Millipore), BRCA2 (OP95, Millipore), and pS113 FAAP20 (in house; Genscript). Mitomycin C (M5030), Z-Leu-Leu-Leu-al (MG132; C2211), and cycloheximide (C4859), were purchased from Sigma-Aldrich. Okadaic acid (459620) was from EMD Millipore and all-trans retinoic acid (ATRA)/Tretinoin (S1653) was from Selleckchem. Drugs were used at the concentrations indicated in the figure legends.
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6

Western Blot Analysis of FANC Proteins

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Cells were lysed with NETN300 buffer (1 % NP40, 300 mM NaCl, 0.1 mM EDTA, and 50 mM Tris [pH 7.5]) supplemented with protease inhibitor cocktail (Roche), resolved by SDS-PAGE gels and transferred onto PVDF membranes (Millipore), and then antibodies were detected using the enhanced chemiluminescence method (Western Lightening, Perkin Elmer). The following antibodies were used for Western blot analysis: FAAP20 (Sigma-Aldrich), FANCD2 (FI-17, Santa Cruz), PCNA (PC-10, Santa Cruz), Cyclin E (H-12, Santa Cruz), FANCA (Bethyl), FBW7 (Bethyl), FANCG [33 (link)], MCL-1 (Cell Signaling), GSK3β (Cell Signaling), HA (6E2, Cell Signaling), ubiquitin (P4D1, Cell Signaling), CUL1 (Cell Signaling), Flag (M2, Sigma-Aldrich), c-Myc (9E10, Sigma-Aldrich), β-Actin (Cell Signaling), Tubulin (Sigma-Aldrich), and ORC2 (BD Pharmingen). pS113 FAAP20 phospho-specific antibody was generated by Genscript using the GGHLEpSPARSLC peptide to immunize rabbits.
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