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7 protocols using 8 hydroxy 2 deoxyguanosine 8 ohdg

1

Immunohistochemical Analysis of Oxidative Stress

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Terminally anesthetized mice were perfused intracardially with saline followed by 4% paraformaldehyde. The fixed brains were embedded in paraffin and cut into serial 6 μm thick coronal slides. Immunohistochemistry was performed with antibodies against Iba-1 (Wako Chemicals USA Inc., Richmond, VA, USA) to identify macrophages and microglia; 4-hydroxy-2-nonenal (4-HNE; Abcam, Cambridge, MA, USA) and 8-hydroxy-2-deoxyguanosine (8-OHdG; Abcam) to identify lipid peroxidation and damaged DNA of oxidative impairment. Immunolabeling was detected by applying the peroxidase-antiperoxidase procedure with 3,3′-diaminobenzidine as a co-substrate. For double immunofluorescent staining, antibodies against NeuN (Millipore, Billerica, MA, USA) and cleaved Caspase-3 (Cell Signaling, Danvers, MA, USA) were used to identify apoptotic neurons. Respective negative controls that omit primary antibodies and positive controls were applied for each case. The positive cells were counted at 20× magnification in matched sections. Results are presented as Iba-1+, 4-HNE+, 8-OHdG+ or cleaved-Caspase-3+/NeuN+ cells per mm2 within areas measured from 20× images using Image J.1.34vi software (National Institutes of Health) [12 (link)].
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2

Immunostaining of Muscle Tissue Sections

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Paraffin sections (4 μm) of TA muscle tissues were rehydrated and microwaved in citric acid buffer to retrieve antigens. After incubation with 10% BSA for 1 h, the sections were respectively incubated with primary antibodies against CD45 (1:200; Abcam, MA, United States) and 8-hydroxy-2′-deoxyguanosine (8-OHdG) (1:200; Abcam) overnight. Subsequently, tissue slices were incubated with secondary antibody corresponding to each primary antibodies in dark for 1 h and counter-stained with 4′,6-diamidino-2-phenylindole (DAPI) (Beyotime, Jiangsu, China). Stained slices were observed using a laser scanning confocal microscopy.
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3

Histochemical Analysis of Oxidative Stress and Inflammatory Markers in Periodontal Tissues

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Periodontal sections were blocked in 10% normal goat serum; incubated overnight with primary antibodies against 3-nitrotyrosine (3-NT) (1:200) (Abcam, Cambridge, UK), 8-Hydroxy-2'-deoxyguanosine 8-OHdG (1:200) (Abcam), Nrf2 (1:300) (Abcam), and HO-1 (1:300) (Abcam), Interleukin (IL)-6 (1:200) (Bioss), tumor necrosis factor alpha TNF-α (1:100) (Bioss), receptor activator of NF-ҡB ligand RANKL (1:300) (Abcam), alkalinephosphatase ALP (1:300) (Abcam) and osteocalcin OCN (1:200) (Abcam) at 4 °C; and stained with HRP-conjugated secondary antibodies (ZSJQ-BIO, Beijing, China). Diaminobenzidine (DAB) was used as a substrate for color development. All slides were counterstained with hematoxylin. Images of histologically stained sections were obtained using a BX41 microscope (Olympus, Japan). The H-score method 29 (link) was applied for calculating the staining score of each sample, which was to multiply the immunoreaction intensity (negative: 0, weak: 1, moderate: 2, strong: 3) by the staining extent score (0%-100%). According to the H-score, the stained samples were divided into four groups: negative (-; 0), weak (+; 0~1), moderate (++; 1~1.5), and strong (+++; 1.5~3). Samples with a negative or weak H-score were determined to be the low protein expression group, whereas those with a moderate or strong H-score were classified as the high protein expression group.
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4

Rhubarb Granules Attenuate Collagen-Induced Damage

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Twenty-eight specified pathogen-free, 3-month-old, male Sprague Dawley (SD) rats, were used for this study. Each rat was housed in our animal facility under pathogen-free conditions and fed a standard laboratory diet with free access to water. The temperature was maintained at 18–22°C with a 12-h light/dark cycle. All animal procedures complied with government-published recommendations for the use of laboratory animals. The study was approved by the Institutional Ethics Review Boards of Guangdong Provincial Hospital of Chinese Medicine.
The anti-collagen-I, occludin, 8-hydroxy-2'-deoxyguanosine (8-OHdG), and NF-κB antibodies were procured from Abcam (Cambridge, UK), anti-β-actin antibody was obtained from Sigma-Aldrich (St. Louis, MO, USA). FITC-conjugated anti-mouse IgG, cy3-conjugated anti-rabbit IgG, HRP-conjugated anti-mouse IgG, and rabbit IgG were purchased from Beyotime Biotechnology Company (Shanghai, China).
Rhubarb granules were purchased from Jiang Yin Tianjiang Pharmaceutical Company (Product Lot: 1303196) and were monitored for contaminants (heavy metals, pesticides, and mycotoxins) before formulation.
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5

Immunohistochemical Analysis of Oxidative Stress Markers

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For immunohistochemical analysis, formalin‐fixed, paraffin‐embedded (FFPE) tissue sections were deparaffinized, rehydrated in an ethanol series, and subjected to epitope retrieval using standard procedures. Antibodies against PGC‐1α, superoxide dismutase 2 (SOD2), and Bcl‐2‐like protein 4 (Bax) (all from Cell Signaling Technology, Danvers, MA, USA); cytochrome c (Santa Cruz, Dallas, TX); 4‐hydroxy‐2‐nonenal (4‐HNE; Abcam, Cambridge, UK); and 8‐hydroxy‐2'‐deoxyguanosine (8‐OHdG; Abcam) were used for immunochemical staining. The samples were then examined under a laser scanning microscope (Eclipse TE300; Nikon, Tokyo, Japan) to analyze the expression of PGC‐1α, SOD2, and Bax. Trichrome staining was performed using the Masson’s trichrome staining kit according to the manufacturer’s protocol (Polysciences, Warrington, PA, USA).
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6

Immunohistochemical Analysis of Tissue Markers

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Formalin-fixed, paraffin-embedded 4 μm thick sections were deparaffinized and rehydrated. The sections were incubated overnight at 4 °C with 1:200 dilutions of anti-α-SMA, -collagen IV, -fibronectin, -8-Hydroxy-2′-deoxyguanosine (8-OHdG), and -F4/80 (Abcam, Cambridge, CB2 OAX, UK), following antigen retrieval. After multiple phosphate-buffered saline (PBS) washes, a universal biotinylated secondary antibody was applied at concentrations ranging between 1:50 and 1:200. Subsequently, a streptavidin–peroxidase solution was added, following the instructions provided in the Vectastain ABC Kit (Vector Labs, Burlingame, CA, USA). Color development was achieved using a 3,3′-diaminobenzidine (DAB) solution (Vector Labs). The sections were counterstained with hematoxylin, then sequentially rehydrated in various alcohol/water mixtures and xylene before being covered with coverslips. For the negative control, the primary antibody was omitted, and then sections were incubated with the corresponding secondary antibodies and the detection solutions. Immunohistochemical staining evaluation involved calculating the area of stained pixels using the ImageJ software (https://imagej.nih.gov/ij/download.html, accessed on 1 June 2022) in a blinded manner [22 (link)].
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7

Immunostaining Techniques for Biomarker Analysis

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Both IHC and IF staining were performed using standard protocols [17, (link)31, (link)[33] (link)[34] (link)[35] (link)[36] (link). The antibodies used included: anti-β-actin antibody (1:20000) (Sigma-Aldrich, Oakville, ON, Canada); anti-Ang II antibody (1:200) (Phoenix Pharmaceuticals, Burlingame, CA, USA); antibodies to AT 1 R (1:100), Synpo (P-19) (1:100) and cyclin-dependent kinase inhibitor p57 (H-91) (1:100) (Santa Cruz Biotechnology, Santa Cruz, CA, USA); antibodies to ACE2 (1:400), WT1 (C-19) (1:100); 8-hydroxy-2-deoxyguanosine (8-OHdG) (1:400) (Abcam, Toronto, ON, Canada); anti-ACE antibody (1:200) (Invitrogen, Burlington, ON, Canada); and anti-MAS1 antibody (1:200) (Novus Biologicals, Toronto, ON, Canada).
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