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Dionex ultimate 3000 autosampler

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Dionex Ultimate 3000 Autosampler is a laboratory instrument designed to automate the injection of liquid samples into an analytical system, such as a high-performance liquid chromatography (HPLC) or ultra-high-performance liquid chromatography (UHPLC) system. The autosampler can handle a variety of sample types and volumes, and it is capable of performing tasks such as sample identification, preparation, and injection with high precision and reproducibility.

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5 protocols using dionex ultimate 3000 autosampler

1

Quantification of Neurotransmitters via UHPLC-ECD

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All samples were processed and analyzed as previously described (Lyte et al., 2022 (link)). Briefly, thawed samples were homogenized in a BeadRuptor and then centrifuged at 3,000 × g and 4°C for 15 min. Yolk samples required heating to 37°C and diluting 1:10 with mobile phase in order to pass through the spin filters. Sample supernatant was passed through 2–3 kDa spin filters, and flow-through was stored at −80°C until ultra-high performance liquid chromatography with electrochemical detection (UHPLC-ECD). The UHPLC-ECD consisted of a Dionex Ultimate 3,000 autosampler, a Dionex Ultimate 3,000 pump, and Dionex Ultimate 3,000 RS electrochemical detector (ThermoFisher-Scientific, Sunnyvale, CA). Mobile phase was buffered 10% acetonitrile (Catalog #: NC9777698, ThermoFisher-Scientific) and the flow rate was 0.6 mL/min on a 150 mm (length) 3 mm (internal diameter) 3 µm (particle size) Hypersil BDS C18 column (Catalog #: 28,103-153030, ThermoFisher-Scientific). A 6041RS glassy carbon electrode set at 400 mV was used for electrochemical detection. Data were analyzed using the Chromeleon software package (version 7.2, ThermoFisher-Scientific), and neurochemical identification was confirmed using the retention time of the corresponding analytical standard (Millipore-Sigma, St. Louis, MO) (for norepinephrine, Catalog #: 636-88-4; for L-dopa, Catalog #: 59-92-7).
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2

Size Exclusion Chromatography of Acetylated Samples

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Ten mg of sample was weighed into a capped tube and then added with 250 µL of anhydrous pyridine. The mixture was cooled to 0 °C before adding 500 µL acetic anhydride, then stirred overnight on an orbital stirrer at room temperature. The mixture was then cooled to 0 °C before adding 1 mL of methanol. Excess reagent and solvents were removed by successive addition of toluene and methanol under a vacuum. The resulting samples were dissolved in 5 mL of tetrahydrofuran (THF) and filtered prior to analysis by HPSEC (0.45 µm GHP Acrodisc microfilters, Merck, Darmstadt, DE, USA). SEC analysis of acetylated samples was performed using THF stabilized with butylated hydroxytoluene (BHT) as eluent at 1 mL min−1 (Dionex Ultimate 3000 Pump, Thermo Fisher Scientific, Waltham, MA, USA). Then, 10 µL was injected (Dionex Ultimate 3000 Autosampler, Thermo Fisher Scientific, Waltham, MA, USA) on a Mixed C column (5 µm, 7.5 × 600 mm; Polymer Laboratories, Long Beach, CA, USA) and the signal was read at 280 nm (Dionex Ultimate 3000 UV/vis detector, Thermo Fisher Scientific, Waltham, MA, USA). Molar mass distributions were determined by a calibration curve based on polystyrene standards (Polymer Laboratories, Church Stretton, UK).
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3

Quantification of Endogenous Surfactants in Rat Mucus

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The utilized quantification method is described in detail in Klitgaard et al. [20] (link). The mucus from eight rats was used to quantify endogenous surfactants, i.e., bile salts, polar lipids, and neutral lipids, by reverse-phase high-performance liquid chromatography with charged aerosol detection (RP-HPLC-CAD). In short, the mucus samples were weighed and diluted in cold methanol containing an internal standard mix to precipitate the proteins. Following centrifugation using a Heraeus Biofuge 15 centrifuge from Thermo Fisher Scientific (Osterode, Germany) at 13,300 rpm for 10 min (16,810 × g at r max ), the supernatant was analyzed by RP-HPLC-CAD using a Dionex Ultimate 3000 pump, Dionex Ultimate 3000 Autosampler, Dionex Ultimate 3000 column compartment, and a Corona Veo Charged Aerosol Detector from Thermo Scientific (Waltham, MA, USA). The sample content was separated on an ACE Excel5 SuperC18 250 × 3.0 mm column with an ACE 5 SuperC18 analytical guard cartridge from Advanced Chromatography Technologies Ltd (Aberdeen, Great Britain) using a gradient of ammonium acetate buffer (pH 4), methanol, acetonitrile, and isopropanol within 60 min. Each peak was identified through comparison to pure standard solutions of representative bile salts, polar lipids, and neutral lipids.
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4

HPLC Analysis of Compounds

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The analysis was performed with a high-performance liquid chromatographic -Thermo Scientific UltiMate 3000 Analytical LC System, equipped with a quaternary pump (Thermo Scientific Dionex UltiMate 3000 LPG-3400 SD Quaternary Pump), an automatic injector (Thermo Scientific Dionex UltiMate 3000 Autosampler), a variable wavelength vibration detector (Thermo Scientific Dionex UltiMate 3000 VWD), and a diode array detector (Thermo Scientific Dionex UltiMate 3000 DAD-3000 Diode Array Detectors). Data collection and analysis were performed using Chromeleon™ 7.2 chromatographic data software (Thermo Scientific).
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5

Comprehensive Carcass Composition Analysis

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The moisture content was analyzed by drying the carcass components (skin, meat, and frame) (2.0 g) at 104 °C for 20 h [50 ]. The ash content was determined by combusting the pre-weighed samples in a muffle furnace at 540 °C for 16 h [51 ]. Crude protein was determined using the Kjeldahl titration method [52 ] and the lipid content was determined by the Bligh and Dyer method [53 (link)]. The determination of the total amino acid composition of the freeze-dried skin sample was performed as described by Blackburn [54 ], using a reversed-phase Ultra High-Performance Liquid Chromatography (RP-HPLC) (Dionex UltiMate® 3000 UHPLC+ Focused, Dionex UltiMate® 3000 Autosampler, Dionex RF Fluorescence Detector, Thermo Scientific, Waltham, MA, USA) and NovaPak column (Nova-Pak C18 4 μm, 3.9·150 mm, Waters tech. Ltd, Wexford, Ireland). The method cannot detect proline, hydroxyproline, hydroxylysine, or cysteine. Glycine and arginine are determined together as their peaks merge.
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