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Hepta adapter

Manufactured by Bio-Rad

The Hepta adapter is a laboratory equipment designed to provide a secure and convenient connection between sample tubes and various instruments or accessories. It features seven individual ports that can accommodate different tube sizes, allowing for efficient handling and processing of multiple samples simultaneously.

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2 protocols using hepta adapter

1

Genetic Manipulation of C. elegans Strains

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C. elegans were grown under standard conditions (Lewis and Fleming, 1995 ). The following strains were used in this study: N2 wild type Bristol, DP38 unc-119(ed3) (Maduro and Pilgrim, 1995 (link)), OK0460 tbx-2(ok529)/dpy-17(e164) unc-32(e189) (Roy Chowdhuri et al., 2006 (link)), OK0507 cuIs21[ceh-22∷gfp] III (Roy Chowdhuri et al., 2006 (link)), OK0640 cuIs31[ceh-22∷gfp] X, CB262 unc-37(e262) I (Brenner, 1974 (link)), OK0660 tbx-2(bx59) III (Huber et al., 2013 (link)).
The following strains were generated for this study: OK1061 tbx-2(ok529) III; cuEx809[tbx-2∷TY1∷EGFP∷3xFLAG+unc-119(+)], OK1065 tbx-2(ok529) III; cuEx810[tbx-2∷TY1∷EGFP∷3xFLAG+unc-119(+)], OK1054 tbx-2(ok529); cuEx814[tbx-2FDV->ADA∷TY1∷EGFP∷3xFLAG+unc-119(+)], OK1033 unc-37(e262); tbx-2(bx59), OK0998 unc-119(ed3); cuIs34 [Ptbx-2∷gfp+unc-119(+)], OK1025 unc-37(e262); cuIs34, OK1055 unc-37(e262) I; tbx-2(bx59) III; cuIs31/+ X, OK1053 glp-1(e2141) III; cuIs31 X.
Germline transformation was performed by biolistic transformation using a PDS-1000/He (Bio-Rad) particle delivery system equipped with a Hepta adapter (Bio-Rad) with modifications suggested by the TransgeneOme project (Sarov et al., 2012 (link)) (https://transgeneome.mpi-cbg.de/transgeneomics/manuals.html). NEP plates seeded with E. coli NA22 were used to grow larger populations of DP38 worms for transformation (Merritt and Seydoux, 2010 (link)).
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2

Somatic and Germline Transformation Protocols

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All procedures for generating somatic and germline transformants and crosses were done as described [106 (link), 107 (link)] with some changes. For the germline biolistic transformation, 100 μg of plasmid DNA was digested with restriction enzymes to release the targeting fragment, and used to coat gold particles (SeaShell S550d or Chempur 900040), which were then deposited onto seven microcarriers and fitted into the hepta adapter (Biorad). A biolistic shooting was performed 4 hours after mixing of CU428 and B2086 strains. The hepta adapter assembly was positioned on the third slot from the top inside PDS1000/He and the rapture disk had the value of 1800 psi. The conjugating cells were spread as a thin layer onto a 10-cm wide Petri dish containing a layer of Tris-Agar (10 mM Tris-HCl pH 7.4, 1.5% agar) and positioned at the bottom-most slot of PDS1000/He. To generate homokaryons, we either used the standard procedure based on two rounds of genomic exclusion or the short circuit genomic exclusion (SCGE) [115 (link)] with either B*VI or B*VII [83 (link)]. Specifically, the homokaryons for SUP1, CDKR1-KO, LF4A-KO_CDKR1-KO, ovGFP-LF4A and ovGFP-LF4A_CDKR1-KO were made using the SCGE. For genotyping the cdkr1sup1 allele its sequence introduced an MboI restriction site that was detected in the 1 kb PCR product (with primers 5’-TGGTGATTTTGGATCAGCT-3’ and 5’-CTTGCTTTCCTCAAATAAAC-3’).
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