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Celld analysis software

Manufactured by Olympus
Sourced in United States

CellD is a software application designed for the analysis of microscopic images. It provides tools for the segmentation, tracking, and quantification of individual cells within these images. The software is capable of processing a variety of image formats and supports a range of analysis techniques to aid researchers in their investigations.

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4 protocols using celld analysis software

1

Actin Cytoskeleton Visualization in Cells

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Cells on the material were fixed with 4% paraformaldehyde (PFA) solution for 15 min. After PFA was removed, cells were rinsed with phosphate saline buffer twice and permeabilized with 0.1% (v/v) Triton X-100, washed with PBS again and stained with Texas Red®-X phalloidin (ThermoFisher, Madison, WI, USA), a high-affinity F-actin probe conjugated to red fluorochrome, for 20 min at room temperature in darkness. Finally, fluorescent-labelled cells were observed using an inverted fluorescence microscope (Olympus IX51, Olympus, Melville, NY, USA) with a TRICT filter (λex/λem = 550/600 nm) for Actin using CellD analysis software (Olympus, Olympus, Melville, NY, USA).
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2

Actin and Hoechst Cytoskeleton Staining

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Actin labeling was performed in order to evaluate qualitatively F-actin microfilaments of cytoskeleton (involved in mobility and intracellular scaffold formation). Additionally, Hoechst staining was carried out to determinate the number of viable cells. Cells on the films were fixed at 96 h with 4% paraformaldehyde (PFA) solution for 10 min. After PFA was removed, cells were rinsed with PBS twice and permeabilized with 0.1% (v/v) Triton X-100. Then, the cells were washed with PBS and stained with Texas Red®-X phalloidin (Life Technologies), a highaffinity F-actin probe conjugated to red fluorochrome, for 20 minutes at room temperature and in darkness, followed by Hoechst staining (Invitrogen, Molecular Probes®). Finally fluorescent-labeled cells were observed using an inverted fluorescence microscope (Olympus IX51) with a TRICT filter (λ ex /λ em =550/600 nm) for Actin and DAPI filter for Hoechst (λ ex /λ em = 380/455 nm) using CellD analysis software (Olympus).
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3

Fluorescent Labeling of Actin Cytoskeleton

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Cells were fixed with 4% paraformaldehyde (PFA) solution for 15 min. After PFA was removed, cells were rinsed with PBS twice and permeabilized with 0.1% (v/v) Triton X-100, washed with PBS and stained with Texas Red®-X phalloidin (Life Technologies), a high-affinity F-actin probe conjugated to red fluorochrome, for 20 min at room temperature and in darkness, followed by Hoechst staining (Invitrogen, Molecular Probes ®) for nuclei visualization. Finally fluorescent-labelled cells were observed using an inverted fluorescence microscope (Olympus IX51) with a TRICT filter (λex/λem = 550/600 nm) for Actin and DAPI filter for Hoechst (λex/λem = 380/455 nm) using CellD analysis software (Olympus).
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4

Osteoclast Differentiation via TRAP

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TRAP was studied using immunocytochemistry in order to evaluate RANKL-induced osteoclast differentiation over the samples. For TRAP staining rabbit anti-TRAP (1/200; Santa Cruz Biotechnology) and antirabbit (1/200; Millipore) antibodies were used. The staining protocol was performed as standard procedures (PFA 4% fixation; Blocking Solution: 5% Normal Donkey Serum; 0.3% Triton X-100 in 1 × PBS). The visualization of the fluorescent-labelled cells was performed in an inverted fluorescence microscope (Olympus IX51) with a TRICT filter (λex/λem = 547/572 nm) using Cell D analysis software (Olympus).
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