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60 protocols using anti cd11b

1

Assessing Microglial Activation and Signaling

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For ICC assays, BV2 microglial cells were exposed to 200 ng/mL LPS or PBS for 30 min before treatment with 50 μM donepezil or vehicle (1% DMSO) for 5.5 h. The cells were then fixed for 10 min in 4% PFA, washed with PBS, and incubated overnight at 4 °C with anti-CD11b (Abcam, Cambridge, UK) and anti-p-NFκBser536 (Cell Signaling Technology, Danvers, MA, USA) or anti-CD11b and anti-p-STAT3ser727 (Abcam, Cambridge, UK). After washing 3× for 10 min with PBS, the cells were incubated at room temperature with Alexa Fluor 488-conjugated anti-rat and Alexa Fluor 555-conjugated anti-rabbit antibodies (1:200, Molecular Probes, Eugene, OR, USA) for 2 h. The immunostained cells were washed with PBS for 10 min and mounted on glass slides using fluorescence mounting medium (Agilent Technologies, Santa Clara, CA USA). Images of the cells were acquired by fluorescence microscopy (DMi8, Leica Microsystems, Wetzlar, Germany), and fluorescence intensity was analyzed using Image J (Version 1.53a, National Institutes of Health, Bethesda, MD, USA).
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2

Immunohistochemical Analysis of Gastric Pathology

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Longitudinal stomach tissue strips from H. felis-infected or uninfected mice were fixed with 10% formaldehyde, embedded in paraffin, and cut into 4-μm-thick sections. Hematoxylin and eosin staining was performed as per standard protocols, and the presence of lymphoid follicles and lymphoepithelial lesions (LELs) were recorded. Sections of murine stomach or human MALT lymphoma tissues were subjected to heat-induced epitope retrieval and then incubated overnight with anti-TCRγδ (Abcam, Cat. no. ab118864), anti-IL-17 (Abcam, Cat. no. ab79056), anti-IL-1β (Abcam, Cat. no. ab9722), anti-IL-23 (Santa Cruz, Cat. no. sc-50303), anti-Arg-1 (Proteintech, Cat. no. 16001-1-AP), anti-iNOS (Proteintech, Cat. no. 18985-1-AP), anti-Gr-1 (R&D systems, Cat. no. MAB1037-100), anti-CD11b (Abcam, Cat. no. ab133357), anti-CD33 (Abcam, Cat. no. ab11032), and anti-CD11b (Abcam, Cat. no. ab133357) primary antibodies at 4°C. The following day, the sections were probed with biotin–streptavidin horseradish peroxidase-conjugated secondary antibody, and stained using 3,3′-diaminobenzidine reagent. For immunofluorescence, fluorochrome-conjugated secondary antibodies were used. Positively stained cells were counted in five random non-overlapping fields (400× magnification; Nikon, Ni-U) using ImageJ software. The histoscore of each biomarker was evaluated according to Table 2.
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3

Immunolabeling of Microglia and Astrocytes

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Brain sections were blocked with 10% goat serum in PBS containing 0.2% Triton X-100 and then immunostained with microglial marker mouse anti-CD11b (1:200, Abcam, Cambridge, UK), rabbit anti-Iba1 (1:400, Wako Chemical), rat anti-CD68 (1:200, AbD Serotec) and astrocyte marker mouse anti-GFAP (1:200, Merck Millipore) in blocking solution at 4 °C overnight. Omission of the primary antibody incubation step and/or isotype-matched control antibodies was used to ascertain staining specificity. Brain sections were then incubated at room temperature for 1 hour with AlexaFluor goat anti-mouse IgG-488, goat anti-rabbit IgG-488 and goat anti-rat IgG-555 (Molecular Probes, Life Technologies, USA) at a dilution of 1:200. Brain sections were counterstained with DAPI (4′,6-diamidino-2-phenylindole, 1:2000, Sigma) and mounted using Prolong Gold (Molecular Probes).
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Immunohistochemical Analysis of Neuronal Markers

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Briefly, tissue samples were collected, mounted onto slides from paraffin blocks (5-μm sections), and then deparaffinized in xylene, followed by hydration in a methanol gradient (100%, 95%, 70%, and 50%). Slide samples were treated and 10 mM citrate buffer (pH 6.0) containing 3% H2O2 for antigen retrieval and then incubated with 5% BSA for 30 min. The slides were incubated with the primary antibody at 4°C overnight and then incubated with the biotinylated secondary antibody for 30 min. After that, an avidin-biotin complex kit (Dako/Agilent Technologies, Santa Clara, CA, USA) was used for an additional 30 min, and 3,3′-diaminobenzidine tetrahydrochloride hydrate (DAB) containing 5% H2O2 was used as a chromogen. Hematoxylin and eosin (H&E) staining was performed and visualized by microscopy (Olympus, Tokyo, Japan). The antibodies used are as follows: mouse anti-neurofilament L (clone DA2) (CST, USA), anti-4-HNE (Abcam), anti-CD11b (Abcam), anti-IBA-1 (CST), and anti-GFAP (CST). The intensity of immunohistochemistry (IHC) or immunofluorescence (IF) staining was analyzed using ImageJ software.
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5

Western Blot Analysis of Microglial Markers

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Brain tissues were homogenized in lysis buffer (150mM NaCl, 10mM NaH2PO4, 1mM EDTA, 1% TritonX100, 0.5% SDS) with protease inhibitor cocktail and phosphatase inhibitor (Sigma). Equivalent amounts of protein were analyzed by 4-15%Tris-HCl gel electrophoresis (Bio-Rad). Proteins were transferred to polyvinylidene difluoride membranes and probed with antibodies. Visualization was enabled using enhanced chemiluminescence (GE Healthcare Pharmacia). The following primary antibodies (dilutions) were used: anti-CD68 (1:1000, BioRad), anti-CD11b (1:1000, Abcam), anti-Iba1 (1:1000, Millipore), anti-Phopspho-p38MAPK (1:1000, Cell Signaling), anti-p38MAPK (1:1000, Cell Signaling) and β-actin (1:2000, Cell Signaling). Secondary antibodies were HRP-conjugated anti-rabbit or anti-mouse antibody (1:1000, GE Healthcare).
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6

Multiparametric Immunofluorescence Analysis of Tumor Infiltrates

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Paraffin-embedded sections were de-paraffinized in xylene and rehydrated using alcohol. Citrate buffer were applied to retrieve antigen by incubating the sections by boiling for 10 min in the microwave. Before incubation with primary antibodies at room temperature for an hour, cells were fixed with 4% paraformaldehyde for 10 min and then rinsed with PBS twice and incubated 20 min with fluorescence-conjugated secondary antibodies. The nuclei staining was located with DAPI (Invitrogen) and coverslipped. Immunofluorescent images were first exported and quality by Akoya system. Tumor cryosections were stained with anti-CD3 (clone: D4V8L; cell signaling technical, Mouse), anti-CD8 (clone: D4W2Z; cell signaling technical, Mouse), anti-CD11b (clone: D6X1N; cell signaling technical, Human, Mouse), anti-Ly-6G (clone: E6Z1T; cell signaling technical, Mouse), anti-CD15 (clone: MC480, Human), and anti-CD33 (clone: EPR23051-101, Abcam, Human). Tissues were quantified with Mantra Quantitative Pathology Workstation.
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7

Histological and Immunohistochemical Analysis of NAFLD

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Liver tissues were fixed in 10% formalin, embedded in paraffin, and then cut into 5 μm thick sections. The sections were stained with hematoxylin and eosin (H&E) for histopathology analysis. Immunohistochemistry (IHC) staining was also performed; the slides were deparaffinized and rehydrated with decreasing percentages of ethanol, and sequentially incubated in 0.3% H2O2 with primary antibodies, including anti‐CD11b (dilution rate, 1:80; cat: ab133357; Abcam, Cambridge, UK), anti‐Neutrophil (dilution rate, 1:80; cat: ab53457; Abcam), and anti‐CB1 (dilution rate, 1:80; cat: ADI‐905‐708; Enzo Life Science Inc, PA). Subsequently, the biotinylated secondary antibodies and avidin‐biotin complex reagent were added, and color development was presented by 3,3′‐diaminobenzidine (DAB). All images were visualized and quantified using Panthera L Smart Light Microscope system (Motic, San Antonio, TX). In addition, the pathological lesion score of NAFLD was performed according to the histological scoring system for NAFLD.20
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8

Isolation and Characterization of ADSCs

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Human abdominal subcutaneous adipose tissues were harvested during liposuction procedures after obtaining signed informed consent in the Department of Plastic Surgery, Affiliated Hospital of Zunyi Medical University, China. ADSC isolation and culture was performed as previously described.15 Briefly, human adipose tissue was minced and digested with 0.075% collagenase type I (Sigma) for 45 minutes at 37°C. After digestion, an equal volume of Dulbecco's modified Eagle's medium (DMEM; Gibco, Carlsbad, California) supplemented with 10% fetal bovine serum (FBS; Gibco) was added and the suspension was passed through a 200 μm mesh filter followed by centrifugation at 800g for 5 minutes). The stromal‐vascular fraction cell pellets were resuspended and cultured at 37°C in 5% CO2 in DMEM supplemented with 10% FBS and 1% penicillin‐streptomycin (Gibco). ADSCs were subcultured at 80% confluence, and passage‐3 cells were used in the study procedures. ADSCs surface marker expression was assayed by flow cytometry. Suspensions of 1 × 106 ADSCs were incubated with anti‐CD90, anti‐CD73, anti‐ CD105, anti‐CD34, anti‐CD11b, anti‐CD19, anti‐CD45, or anti‐HLA‐DR antibodies (1 mg/mL; Abcam) at room temperature for 30 minutes, washed with phosphate‐buffered saline (PBS), and analyzed with a MoFlo XDP flow cytometer (Beckman Coulter, Brea, California) and Kaluza software (Beckman Coulter).
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9

Immunohistochemical Analysis of CD11b+ Cells

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The formalin-fixed, paraffin-embedded specimens were cut into 4-μm-thick sections and placed on glue-coated glass slides for immunohistochemistry. Briefly, the samples were deparaffinized in xylene and hydrated in a graded alcohol series and distilled water. Endogenous peroxidase activity was blocked with 3% hydrogen peroxidase for 10 min. Antigen retrieval was performed in citrate buffer (pH 9.0) by autoclaving (Tomy SX-500 High-Pressure Steam Sterilizer, Tomy Seiko Co., Ltd., Tokyo, Japan) and heating at 121 °C for 5 min. The samples were then incubated for 30 min at room temperature (RT) in a blocking solution with 1% rabbit serum (Nichirei Bioscience, Tokyo, Japan). Then, the anti-CD11b (1:100, EPR1244, Abcam, Cambridge, United Kingdom) monoclonal antibody reaction was performed for 16 h at 4 °C. A secondary antibody reaction was performed using an Envision + System-HRP labeled polymer anti-mouse antibody for 30 min at RT, and DAB (3, 3 -diaminobenzidine) was used to visualize the binding of the first antibody. Then, the sections were examined using a Leica DM6000B (Leica, Wetzlar, Germany) fitted with a digital video camera (Leica MC 170HD, Leica). Quantification of CD11b positive cells were counted in ten randomly selected high power (20x) fields in the defect area manually.
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10

Western Blot Analysis of Brain Markers

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The ipsilateral brain tissue was homogenized in lysis buffer (RIPA) containing protease inhibitors (Thermo, USA). After sonication, protein concentrations were calculated and SDS-PAGE carried out. The nitrocellulose membranes were incubated with the following primary antibodies at 4 °C overnight: anti-MBP (1:1000, Abcam, USA), anti-CNPase (1:1000, Novus, USA), anti-CD16 (1:1000, Abcam, USA), anti-CD11b (1:1000, Abcam, USA), anti-CD206 (1:1000, Abcam, USA), and β-actin (1:1000, Santa Cruz, USA). Following incubation with appropriate horseradish peroxidase (HRP)-conjugated secondary antibodies (1:5000, Abgent, USA), the immunoblots were visualized with a computerized image analysis system (Fluro Chen 2.0, USA). The integrated density values were calculated with the software AlphaEaseFC and normalized to β-actin.
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