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23 protocols using dmxaa

1

Transfection of Cyclic Dinucleotides in CD4 T Cells

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Mouse naive CD4 T cells were seeded on plate-bound anti-CD3 (2 µg/mL, clone 17A2; BioXCell) and anti-CD28 (2 µg/mL, clone PV1; BioXCell). Human naive CD4 T cells were seeded on plate-bound anti-CD3 (5 μg/mL, clone OKT-3; BioXCell) and anti-CD28 (2 µg/mL, clone CD28.2; BioLegend). Cells (3×106 cells/mL) were transfected for 6 hours with 80 µg/L cyclic dinucleotides (unless specified otherwise) using Opti-MEM Glutamax (Gibco) and Lipofectamine 2000 (Invitrogen), according to the manufacturer’s instructions. Alternatively, 1.5×106 cells/mL CD4 T cells were treated with indicated doses of 5,6-dimethylxanthenone-4-acetic acid (DMXAA) for 4 hours in mouse T-cell culture medium.
2′3′-cGAMP (cyclic (G(2′,5′)pA(3′,5′)p)), referred to as cGAMP; 2′3′-cGAMP control (2′5′-GpAp), referred to as control; as well as DMXAA (Murine STING ligand, Xanthenone Analog) were purchased from InvivoGen.
When indicated, mTOR inhibition was achieved by adding 10 nM of rapamycin (Rapa; Calbiochem, Merck) during the 6-hour transfection step.
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2

In vivo Immunotherapeutic Regimens

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The following in vivo treatment regimens were used in this study: DMXAA (5,6-dimethylxanthenone-4- acetic acid, Invivogen): 20mg/Kg intraperitoneal (i.p.), 1d p.i. Poly I:C (Invivogen): 100ug/mouse, hydrodynamic i.v., 1dpi. Murine IFNα and IFNβ: 3.3μg/Kg i.p. 12-h p.i. and 24-h p.i.
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3

ER Stress and Immune Signaling Pathways

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Herring testis DNA was used as dsDNA for immune stimulations (Sigma). 2’3’-cGAMP and DMXAA were used for STING agonists (Invivogen). PolyI:C was transfected as a MAVS-pathway agonist (Invivogen). Lipofectamine 2000 was used as transfection reagent for intracellular stimulations (Thermo Fisher).
Antibodies: ATF4 (CST D4B8), ATF6 (CST D4Z8V), BIP (CST C50B12), CHOP (CST L63F7), phospho-EIF2α (CST D968), HMGB1 (Abcam 18256), IRAK1 (CST D5167), IRE1α (CST 14C10), phospho-IRE1α (Thermo Fisher PA1-16927), IRF3 (CST D83B9), phospho-IRF3 (CST 4D4G), MAVS (CST 4983), STING (CST D2P2F), TOLLIP (Abcam ab187198), goat anti-rabbit IgG (Biorad 1706515), goat anti-mouse IgG (Biorad 1706516).
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4

Immunotherapy Protocol for Murine Cancer

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Recombinant murine IL-12 was overexpressed and purified, as described previously [32 (link)]. IL-12 was formulated in 1.5 w/v% chitosan acetate (CS) (Heppe Medical Chitosan, Halle, Germany) dissolved in DPBS, as described previously [33 (link)]. Unless otherwise noted, the dose of IL-12 was 1 µg and CS/IL-12 was injected intratumorally within an hour of CA. R848 (Resiquimod) (Invivogen, San Diego, CA, USA) was formulated in PBS and delivered intratumorally at 10 µg/mouse. DMXAA (Invivogen) was formulated in DMSO and delivered intratumorally at 500 µg/mouse. For the anti-PD-1 and isotype antibody (BioXCell, Lebanon, NH, USA, clone: RMP1.14) treatments, 300 µg was injected i.p. every 3 days, starting on the day of CA for a total of 6 doses.
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5

Mapping STING-Mediated Signaling Cascades

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Poly(I:C) and Poly(A:T) [dAdT] was purchased from Sigma Aldrich. c-di GMP, c-di AMP, 2′3′ cGAMP, 3′3′ cGAMP, and DMXAA was purchased from Invivogen. Lipofectamine 2000 (Life Technologies) was used to transfect c-di GMP, c-di AMP, 2′3′ cGAMP, 3′3′ cGAMP, and dAdT. Xtremegene 9 to transfect Poly(I:C). For stimulation experiments macrophages were plated at a density of 106 cells/mL. C-di-nucleotide stimulations done as indicated at 2ug or 4ug/mL. Antibodies: (Cell Signaling): STING #3337; p65 #8242; Phospho-p65 #3033; ERK #4695; Phospho -ERK #4370; p38 #9212; Phospho -p38 #4511; TBK1 #3013; Phospho -TBK1 #5483; Phospho -IRF3 #4947; JNK #9258; Phospho -JNK #9251; HA-Tag #3724.(ENZO): Grp94, #ADI-SPA-850.
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6

STING and TLR Agonist Stimulation Assay

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All STING and TLR agonists were supplied by InvivoGen: 5,6,-dimethylxanthenone-4-acetic acid (DMXAA, vadimezan), 2’3’-cyclic guanosine monophosphate-adenosine monophosphate (2’3’-cGAMP), 3’3’-cyclic di-adenosine monophosphate (3’3’-c-di-AMP), the Rp,Sp-isomers of the bisphosphorothioate analog of the mammalian cyclic dinucleotide 2’3’-cGAMP (2’3’-cGAM(PS)2 (Rp/Sp)), 3’3’-cyclic adenosine monophosphate-inosine monophosphate [77 (link)], imiquimod, ODN1826, and ODN2216. STING agonists were diluted in PBS (with 10% DMSO for DMXAA) and administered by local application or i.p. injections. STING agonists were added to the cell medium. In some experiments, the cells were pretreated with digitonin to permeabilize the cell membrane. In brief, medium was removed and cells were permeabilized with digitonin (5 μg/mL) and buffer (0.2% BSA, 50 mM HEPES, 100 mM KCl, 3 mM MgCl2, 0.1 mM DTT, 85 mM sucrose, 1 mM ATP, 0.1 mM GTP, 2.2 mM NaOH) together with the respective drug for 10 minutes. New antibiotics-free medium was then supplied. TLR agonists were diluted in PBS. Mock treatment was performed with PBS in an appropriated volume.
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7

Fluorescent Thiol Labeling and Immune Stimulation

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Menadione, hydrogen peroxide solution, diamide and N-Acetyl-L-Cysteine were purchased from Sigma-Aldrich. Iodoacetamide (IAM), N-Ethylmaleimide (NEM), 5-iodoacetamido-fluorescein (5-IAF) were purchased from Sigma-Aldrich to label free thiols on protein. cGAMP, ISD, DMXAA, poly I:C, poly dA:dT were purchased from Invivogen to induce interferon signaling.
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8

ISD017 and cGAMP Modulate Ifnβ-Luciferase Activity

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ΔβLUC mice have been described previously [50] (link). For ex-vivo quantification of the Ifnβ-luciferase reporter activity 6–12 week old mice were injected i.p. with vehicle or 30 mg/kg ISD017 in PBS (pH7.4) + 20 mM NaOH. At the indicated time points after dosing, mice were challenged i.p. with 25 mg/kg DMXAA (Invivogen). Five hours later, 107 splenocytes were lysed in 100 µl Passive Lysis Buffer (Promega) to quantify luciferase activity using the Luciferase Assay Reporter Kit (Promega) on a Clariostar Luminometer (BMG Labtech). For in vivo imaging of Ifnβ-luciferase reporter activity 6–12 week old mice were injected i.p. with vehicle or 30 mg/kg ISD017 in PBS (pH7.4) + 20 mM NaOH. At the indicated time points after dosing, mice were challenged i.v. with 20 mg/kg 2´3´-cGAMP (Invivogen). Five hours later, mice were injected with 150 mg/kg XenoLight d-luciferin (Perkin Elmer) in isotonic sodium chloride. Photon flux was quantified one minute after injection on an In-vivo Xtreme II imaging device (Bruker) with binning set to 8 × 8 pixels and an integration time of 30 s.
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9

Isolation and Characterization of Lung Dendritic Cells

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Lung tissue, control or infiltrated by tumors, were harvested after PBS lung circulatory perfusion. The whole tissue was mechanically cut into small pieces and digested with Collagenase type 2 (265 U/mL; Worthington) and DNase (250 U/mL; Thermo scientific) at 37 °C for 30’. Collagenase was then stopped by EDTA 10 mM and the cell suspension was filtered using 70 μm cell strainer (Corning).
CD11c+ lung cells were separated by immunomagnetic sorting using CD11c microbeads (Miltenyi Biotec) following manufacturer’s instructions. Dendritic cells were purified by FACS sorting with FACS Aria II (BD Biosciences), using the gating strategy shown in Supplementary Fig. 1c, after CD11c+ cells staining in PBS + 2% FBS with the following antibodies: CD11c-A647 (N418), CD103-PE (2E7) purchased from Biolegend and SiglecF-BB515 (E50-2440), CD11b-BV421 (M1/70) and MHCII-BV711 (M5/114.15.2) from BD Biosciences. For gene expression analysis up to 30,000 cells were sorted directly into 350 μL RLT buffer (Qiagen). For ex-vivo stimulation, 10,000 cDC1 were plated in U-bottom 96-well, stimulated with CpGB (1 µg/mL, Invivogen) or DMXAA (25 µg/mL, Invivogen) for 3 h and then lysed in RLT buffer for gene expression analysis.
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10

Naive CD4+ T Cell Isolation and Skewing

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CD4+ T cells were enriched from mice lymph nodes and spleen with anti-CD4 microbeads by using an AutoMACS magnetic cell sorter (Miltenyi Biotec) according to the manufacturer’s protocol. Thereafter, naive CD4+CD62LhighCD44lowT cells were purified using a FACSAria III cell sorter (BD Biosciences). The sort-purified naive CD4 T cells were TCR-activated with plate-bound anti-CD3ε (4 μg/mL) and anti-CD28 (2 μg/mL) (BD Biosciences) in complete IMDM (supplemented with 10% FBS, L-glutamine, penicillin-streptomycin and β–mercaptoethanol). Skewing conditions were as follows: 1 ng/mL rhTGF-β1 (eBioscience) plus 25 ng/mL rmIL-6 (R&D Systems) for cTH17; 25 ng/mL rmIL-6, 20 ng/mL rm-IL-1β and 30 ng/mL rmIL-23 (all from R&D Systems) for pTH17; 1 ng/mL rhTGF-β1 for iTreg; 20 ng/mL rmIL-12 and 20 ng/mL rmIL-2 (both from R&D Systems) for TH1. When indicated, CH223191 (30 μM; Tocris), DMXAA (3–30 μM; Invivogen), C-176 (1 μM; Sigma-Aldrich), c-di-AM(PS)2 (Rp,Rp) (15 μM; Invivogen), c-di-AMP or c-di-GMP (both 30–100 μM; Invivogen) were used.
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