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12 protocols using anti fabp4

1

Western Blot Analysis of Adipogenic Markers

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Total proteins were extracted using RIPA lysis buffer within 1% protease inhibitor cocktail (Millipore, Bedford, MA, USA) 0.1 mM according to the manufacturer’s instructions. Protein samples were separated using 10% sodium dodecyl sulfate-polyacrylamide gels and transferred to a nitrocellulose membrane (Millipore, Bedford, MA, USA). After blocking, the membranes were then incubated at 4 °C overnight with the following primary antibodies: anti-HIF-1α, anti-VEGF-A, anti-JNK, anti-PPAR-γ, anti-C/EBP-α, anti-FABP4 (1:1000, all Cell Signaling Technology, Danvers, MA, USA), anti-NF-κB p65, anti-p-IκB, anti-TNF-α, anti-MCP-1 (1:1000, all Abcam, Cambridge, MA, USA), anti-SFRP5, anti-Wnt5a, anti-Wnt10b, anti-β-catenin (1:1000), and anti-β-actin (1:5000, all GeneTex, Irvine, CA, USA). After washing, the membranes were probed with corresponding second antibodies (1:3000, GeneTex). The density of the individual protein bands was quantified by densitometric scanning of the blots using ImageJ software.
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2

Protein Expression Analysis by Western Blot

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Cells were lysed and centrifuged at 12,000g for 15 minutes. Equal amounts of cell extracts were fractionated by SDS-PAGE and transferred to PVDF membrane (ThermoFisher Scientific). Membranes were incubated in primary antibodies anti-SIRT3 (Cell Signaling), anti-FABP4 (Cell Signaling), and anti-β-actin (Sigma) overnight followed by secondary antibodies conjugated to horseradish peroxidase (Cell Signaling) and visualized using enhanced chemiluminescent substrate (Thermo-Fisher).
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3

Adipocyte Protein Expression Analysis

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Cells were lysed and tissues were homogenized by Polytron homogenizer immediately after dissection in western extraction buffer (150 mmol/L NaCl, 10% glycerol, 1% NP-40, 1 mmol/L EDTA, 20 mmol/L NaF, 30 mmol/L sodium pyrophosphate, 0.5% sodium deoxycholate, 0.05% SDS, 25 mmol/L Tris-HCl: pH 7.4) containing protease inhibitor cocktail (Roche). The lysate was then sonicated, and debris was removed by centrifugation. SDS-PAGE and western blotting were performed and detected with ECL (Thermo Scientific). Antibodies used for western blot analysis were as follows: anti-Adipsin (R&D Systems, catalog# AF5430), anti-adiponectin (Invitrogen, catalog# PA1-054), anti-C3 (Proteintech, catalog# 21337-1-AP), anti-FABP4 (Cell Signaling Technology, catalog# 2120), anti-phospho-GSK-3β (Cell Signaling Technology, catalog# 9336), anti-HSP90 (Proteintech Group, Inc, catalog# 1371-1-AP), and anti-β‐Catenin (Cell Signaling Technology, catalog# 9562).
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4

Western Blotting Protein Detection

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Western blotting was performed using the following primary antibodies: anti-CLUH (A301-764A; Bethyl Laboratories, Montgomery, TX), anti-PPAR-γ (SC-7273; Santa Cruz Biotechnology, Santa Cruz, CA), anti-FABP4 (#2120; Cell Signaling Technology, Beverly, MA), anti-Flag (F3165, Sigma-Aldrich) and anti-GAPDH (SC-25778, Santa Cruz Biotechnology). Immunoreactive proteins were detected using enhanced chemiluminescence (ECL) reagents (Santa Cruz Biotechnology).
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5

Adipogenic and Epithelial-Mesenchymal Transition Modulation

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3T3-L1 cells were purchased from the American Type Culture Collection (USA). 3T3-L1 cells were maintained in DMEM (Thermo Fisher Scientific, USA), bovine calf serum (BCS, HyClone, USA) and 1% penicillin/streptomycin (Corning Inc., USA). MDA-MB-231 and MTV/TM-011 cells were obtained from Korean Cell Line Bank (Republic of Korea). MDA-MB-231 and MTV/TM-011 cells were cultured in RPMI (Corning Inc.) containing 10% fetal bovine serum (Thermo Fisher Scientific) and 1% penicillin/streptomycin (Corning Inc.). Cells were maintained at 37 °C in a humidified atmosphere with 5% CO2/95% air. Recombinant mouse GREM2 protein was obtained from R&D Systems (USA). Recombinant mouse IL-6 protein was purchased from Sino Biological Inc. (China). Rabbit polyclonal GREM2 antibody was purchased from Abcam (UK). Anti-PPARγ, anti-C/EBPα, anti-FABP4, anti-vimentin, anti-slug, anti-twist1, and anti-β-actin were obtained from Cell Signaling Technology (USA). Epigallocatechin gallate (EGCG), metformin, and PKH26/PKH67 fluorescent cell linker kits were purchased from Sigma-Aldrich (USA).
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6

Comprehensive Protein Analysis Workflow

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Western blot was performed according to standard procedure. The treated cells were lysed with ice‐cold RIPA buffer containing both protease and phosphatase inhibitors. The cytoplasmic and nuclear extracts from cells were separated using nuclear and cytoplasmic Extraction kits (#78833; Thermo Fisher Scientific). Protein concentrations were quantified using a BCA protein assay kit (Thermo Fisher Scientific). Primary antibodies including anti‐β‐actin (#4790), anti‐FABP4, anti‐CD68, anti‐PCNA (#13110), anti‐p21 (#2974), anti‐Cyclin B1 (#12231), anti‐NF‐κB/p65 (#6956), anti‐Histone H3 (#4499), anti‐FLAG tag (#8146), anti‐ubiquitin antibodies (#3933), and FAK antibody sample kit (#9330) were all purchased from cell signaling technology (Beverly, USA). Anti‐March5 antibody was purchased from ProteinTech (#12213‐1‐AP). Anti‐human USP30 antibody was purchased from Abcam (#ab235299). All bands were visualized by enhanced chemiluminescence and quantified by Image J analysis software.
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7

Western Blot Analysis of Adipocyte Proteins

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Protein was extracted from cells as previously described (51 (link)). For Western blotting analysis, 30 to 40 μg of protein was resolved by 10% SDS-polyacrylamide gel electrophoresis, transferred to nitrocellulose membranes (Bio-Rad), incubated overnight at 4 °C with specific primary antibodies in blocking buffer (Tris-buffered saline, 0.1% Tween-20, and 5% milk or bovine serum albumin), and detected with alkaline phosphatase (AP)–conjugated secondary antibody. The antibodies used were anti-NPRC (1:2000; Novus Biologicals; #NBP1-31365), anti-PPARγ (1:2000; Cell Signaling Technology; #2435), anti-FABP4 (1:1000; Cell Signaling Technology; #2120), anti-ADIPOQ (1:1000; Cell Signaling Technology; #2789), anti-GAPDH (1:2000; Protein Tech; #10494-1-AP), and anti-rabbit IgG-AP (1:20,000; Sigma; #A3687).
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8

Protein Expression Analysis in Mouse Adipose Tissue

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Protein expression was evaluated by western blot. Frozen mouse epididymal fat tissue was homogenized in liquid nitrogen. Tissue was lysed in RIPA lysis buffer (Sigma) containing 1% PI. Cell lysate was kept on ice for 1 h and subsequently centrifuged at 13,000 rpm for 20 min at 4°C. Total proteins (30 μg protein/test) were isolated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to a nitrocellulose membrane (DC, Invitrogen). The membrane was blocked with 5% skim milk and subsequently incubated at 4°C with the following primary antibodies (1:5000 dilution): anti-AMPK, anti-SREBP-1c, anti-FAS, anti-ACC, anti-PPARγ, anti-C/EBPα, anti-FABP4, and anti-adiponectin (Cell Signaling Technology, Danvers, MA, USA). After washing, the membrane was incubated with IgG HRP-conjugated secondary antibody (1:2000) for 2 h at room temperature. Ponceau S was used for staining the protein bands. β-actin was used as the loading control. Proteins were visualized using enhanced-chemiluminescence (ECL) location reagent and quantified with the ImageJ program.
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9

Protein Expression Analysis in Tissues

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Tissues were homogenized using a Polytron homogenizer in the IntactProteintm Lysis Buffer (GenuIn Biotech, #415). The lysate was incubated on ice for complete lysis, followed by heat shock at 95 °C and centrifugation. SDS-PAGE and Western blotting were performed using standard procedures, and bands were detected using enhanced chemiluminescence (ThermoFisher Scientific, 32106). Antibodies used were anti-UCP1 (abcam, ab155117), anti-FABP4 (Cell Signaling Technology, #50699), anti-APN (ThermoFisher Scientific, PA1-054), anti-ADIPSIN (RnD Systems, AF5430), and anti-HSP90 (Proteintech, 13171-AP).
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10

Quantifying Lipid-Associated Proteins in Cells

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OC cells (20,000/cm2 in 35 mm or 60 mm dishes, Corning, Corning, NY, USA) were allowed to adhere overnight and were cultured for 48 or 72 h in media with 5% FBS ± inhibitor. After lysis, cellular proteins were subjected to SDS–PAGE, blotted, and immunostained as previously described [35 (link),36 (link)] using anti-FABP4 (1:200, #2120, Cell Signaling Technology, Boston, MA, USA), anti-FABP5 (1:500, #39926, Cell Signaling Technology), anti-CD36 (1:1000, #14347, Cell Signaling Technology), anti-ARF6 (1:500, #3546, Cell Signaling Technology), anti-FABP6 (1:250, #96122, Abcam, Cambridge, UK), anti-LDLR (1: 1000, #52818, Abcam), anti-FATP2 (1:500, # 175373, Abcam), and anti-actin (1:1000, #1616, Santa Cruz Biotechnology, Dallas, TX, USA). Secondary antibodies were peroxidase-labeled donkey anti-rabbit (1:15,000, #16284, Abcam), donkey anti-goat IgG (1:15,000, #2020, Santa Cruz Biotechnology), donkey anti-mouse (1:10,000, #715-035-150, Jackson ImmunoResearch, West Grove, PA, USA), or donkey anti-sheep (1:10,000, #A16041, Thermo Fisher, Waltham, MA, USA). Detection was by enhanced chemiluminescence.
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