The largest database of trusted experimental protocols

Cytidine 5 monophosphate disodium salt

Manufactured by Merck Group
Sourced in United States

Cytidine 5'-monophosphate disodium salt is a chemical compound used in various laboratory applications. It is a salt form of cytidine 5'-monophosphate, which is a nucleotide derivative. This product can be used as a reagent or substrate in biochemical assays and experiments.

Automatically generated - may contain errors

6 protocols using cytidine 5 monophosphate disodium salt

1

Microfluidic Fabrication Protocols Using Silicon Wafers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Silicon (100) (Si) wafers were purchased from University Wafers (Boston, MA). Poly (methylmethacrylate), PMMA, substrates and cover plates were purchased from Good Fellow (Berwyn, PA) and cyclic olefin copolymer (COC 8007 and 6017) was purchased from TOPAS Advanced Polymers (Florence, KY). An anti-adhesion monolayer of (Tridecafluoro-1,1,2,2-tetrahydrooctyl) Tricholorosilane (T-Silane) was purchased from Gelest, Inc. (Morrisville, PA). Tripropylene glycol diacrylate (TPGA), trimethylolpropane triacrylate (TMPA), Irgacure 651 (photo-initiator), 1-ethyl-3-[dimethylaminopropyl] carbodimide hydrochloride (EDC), thymidine 5′-monophophate disodium salt, 5-methylcytosine monophosphate disodium salt, cytidine 5′-monophosphate disodium salt, adeno­sine 5′- monophosphate disodium salt and guanosine 5′-mono-phosphate disodium salt, triethylammonium acetate (TEAA), cetyltrimethylammonium bromide (CTAB), (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid, 2-amino-2-methyl-1-propanol (AMP), and methanol (MeOH) were purchased from Sigma-Aldrich (St. Louis, MO). Tris-borate buffer and sodium hydroxide (NaOH) was obtained from Fisher Scientific (Houston, TX). ATTO 532 dye was purchased from Atto-Tec (Siegen, Germany). All required dilutions were performed using 18 MΩ/cm MilliQ water (Millipore technologies) and all measurements were performed at 25 °C unless specified otherwise.
+ Open protocol
+ Expand
2

Efficient Enzymatic Analysis of Nucleotides

Check if the same lab product or an alternative is used in the 5 most similar protocols
All synthetic sequences (Table S1) were purchased from Integrated DNA Technologies Inc. (Coralville, IA, USA). D-glucose, pyruvate kinase from rabbit muscle, hexokinase from Saccharomyces cerevisiae, phospho(enol)pyruvic acid monopotassium salt (PEP), adenosine 5′-monophosphate disodium salt hydrate (AMP), cytidine 5′-monophosphate disodium salt (CMP), uridine 5′-monophosphate disodium salt (UMP), guanosine 5′-monophosphate disodium salt (GMP), adenosine 5′-diphosphate disodium salt hydrate (ADP), acetonitrile (ACN), 3-hydroxypicolinic acid (3-HPA), myokinase from rabbit muscle, sodium triphosphate pentabasic, and the DL-dithiothreitol (DTT) solution were purchased from Sigma-Aldrich (St. Louis, MO, USA). LwaCas13a protein was purchased from MCLAB (San Francisco, CA, USA). T4 polynucleotide kinase (T4 PNK) was purchased from Thermo Fisher Scientific (Waltham, MA, USA). CutSmart® buffer was purchased from New England Biolabs Inc. (Ipswich, MA, USA). Diethyl pyrocarbonate distilled water (DEPC-DW) was purchased from Bioneer (Daejeon, Korea). The PGM was purchased from Accu-Chek Active (Roche, Basel, Switzerland).
+ Open protocol
+ Expand
3

Quantifying Cellular Metabolism via LC-MS

Check if the same lab product or an alternative is used in the 5 most similar protocols
For cell-based 13C6 metabolite labeling analysis, around 90% confluent H1299 cells were washed by glucose-free culture medium (Gibco, 11966-025) and cultured in medium containing 13C6-glucose (10 mM) (Cambridge Isotope Laboratories, CLM-1396) for 30 min. High-resolution LC–MS/MS was used for analyzing the levels of 13C6-labeled intracellular metabolites11 (link).
For label-free xenograft metabolite analysis, the xenograft tissue samples were homogenized in 150 μl of extraction solution (half methanol and half water) with 250 ng ml−1 4-nitrobenzoic acid and debrisoquine as internal standard for negative and positive modes, respectively, followed by adding 150 μl of acetonitrile. After incubation for 30 min at −20 °C, the samples were centrifuged at a speed of 16,000g for 30 min at 4 °C. The standards—namely inosine 5′-monophosphate disodium salt (IMP, I4625), adenosine 5′-monophosphate disodium salt (AMP, 01930), guanosine 5′-monophosphate disodium salt (GMP, G8377), uridine 5′-monophosphate disodium salt (UMP, U6375) and cytidine 5′-monophosphate disodium salt (CMP, C1131)—were obtained from Sigma-Aldrich. The samples were transferred to MS vials for LC–MS analysis by QTRAP 7500 System (SCIEX). Data were acquired and normalized to the internal standards and then analyzed with SCIEX OS software.
+ Open protocol
+ Expand
4

Quantitative Analysis of Nucleic Acids

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cytosine (100% purity), uracil (100% purity), guanine (99% purity), adenine (100% purity), hypoxanthine (100% purity) standards, and 5-methyl cytidine (purity ≥ 99%), 1-methylguanosine (100% purity), adenosine 5′-monophosphate sodium salt, cytidine 5′-monophosphate disodium salt, guanosine 5′-monophosphate disodium salt, uridine 5′-monophosphate disodium salt, inosine 5′-monophosphate disodium salt, 5′thymidylic acid disodium salt (purity ≥ 99%), nuclease (nuclease P1), pyrophosphatase (nucleotide pyrophosphatase), and phosphatase (bacterial alkaline phosphatase) reagents were purchased from Sigma.
+ Open protocol
+ Expand
5

Fabrication of Microfluidic Devices

Check if the same lab product or an alternative is used in the 5 most similar protocols
Silicon (Si) 〈100〉wafers were purchased from University Wafers (Boston, MA). Non-impact modified PMMA was received from ePlastics (San Diego, CA). Cyclic olefin copolymer (COC 8007 and COC 5010) were purchased from TOPAS Advanced Polymers (Florence, KY). COC 6015 was obtained from Knightsbridge Plastics Inc. (Fremont, CA). UV curable polyurethane resin was purchased from Chansang Co. ATTO-532 was secured from Atto-Tec (Siegen, Germany). Uridine 5’-monophophate disodium salt, cytidine 5’-monophosphate disodium salt, adenosine 5’-monophosphate disodium salt, and guanosine 5’-monophosphate disodium salt were all obtained from Sigma-Aldrich (St. Louis, MO). Molecular biology grade water was secured from Thermo Fisher (Waltham, MA).
+ Open protocol
+ Expand
6

Comprehensive HPLC Analysis of Biomolecules

Check if the same lab product or an alternative is used in the 5 most similar protocols
High performance liquid chromatography (HPLC)-grade methyl tert-butyl ether (MTBE) and methanol (MeOH) as well as n-hexane were procured from Merck (Darmstadt, Germany). The stock solutions of the standards were prepared at a concentration of 1 mg/mL in MTBE. All stock solutions were stored at −20°C and diluted with MTBE to working solutions prior to analysis. MilliQ water (Millipore, Bradford, United States) was utilized in all experiments. A 15% boron trifluoride solution in MeOH was obtained from RHAWN (Shanghai, China). All pure standards were acquired from Sigma-Aldrich (St. Louis, MO, United States), including inosine 5′-monophosphate disodium salt (5′-IMP), guanosine 5′-monophosphate disodium salt (5′-GMP), adenosine 5′-monophosphate sodium salt (5′-AMP), cytidine 5′-monophosphate disodium salt (5′-CMP), uridine 5′-monophosphate disodium salt (5′-UMP), amino acids standards, bis (trimethylsilyl) trifluoroacetamide (BSTFA), glucose, quercetin, sodium chloride, ergothioneine and phosphate. Bovine serum albumin (BSA) standard solution was purchased from Sangon Biotech (Shanghai) Co., Ltd. (Shanghai, China).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!