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25 protocols using lithium acetate

1

Preparation of 3-bromopyruvic acid compound

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3-bromopyruvic acid, PEG and lithium acetate were purchased from Sigma-Aldrich (USA).
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2

Synthesis and Characterization of NMC622-Based Composite Positive Electrode

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The positive electrode was a composite mixture of single-crystal LiNi0.6Mn0.2Co0.2O2 (NMC622) active material (MSE Supplies, particle size between 3 and 6 μm), Li6PS5Cl (MSE Supplies), and vapor grown carbon fiber (VGCF, Sigma-Aldrich). LiNb0.5Ta0.5O3 (LNTO) was synthesized and coated on the active material to prevent side reactions with LPSC55 (link). Stoichiometric amounts of niobium ethoxide (Sigma-Aldrich, 99.95%), tantalum butoxide (Sigma-Aldrich, 99.99%) and lithium acetate (Sigma-Aldrich, 99.95%) were dissolved in dry ethanol (Sigma-Aldrich, 99.5%) and stirred for 12 h. NMC622 powder was mixed into this solution via sonication in a Branson 1510 Ultrasonic Cleaner at 40 kHz for 2 h at 25 °C, and then the solvent was evaporated in a vacuum oven. The dried powder was annealed in air at 450 °C for 1 min. The composition of the positive electrode was 70 wt.% of LNTO-coated NMC622, 27.5 wt.% LPSC, and 2.5 wt.% VGCF; this mixture was dry ball milled (Fritsch Pulverisette 7) at 150 rpm for 15 min three times in a ZrO2 jar with eight ZrO2 balls that was sealed in an argon-containing glove box (H2O <1 ppm and O2 content <3 ppm) to create the positive electrode composite powder.
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3

Culturing Rat and Human Hepatic Cells

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Clone 9 rat hepatocytes, N1-S1 rat HCC cells, and HUVECs were purchased from the Food Industry Research and Development Institute. HepG2, Hep3B, PLC, Huh7, Mahlavu, and SK-Hep-1 Human HCC cells were purchased from the American Type Culture Collection with validated STR-PCR profile. Clone 9 cells cultured in F12-K medium (Gibco) containing 10% fetal calf serum (HyClone). N1S1 cells were maintained in RPMI-1640 medium (Gibco) containing 10% calf serum (HyClone). HepG2, Hep3B, PLC, Huh7, Mahlavu, and SK-Hep-1 human hepatoma cells were cultured in Dulbecco's modified Eagle's medium (Gibco) containing 10% calf serum (HyClone). HUVECs (passage: 3–6) were cultured in M199 medium (Life Technologies) containing 15% fetal calf serum, 20 U/ml porcine heparin (Sigma), and 100 g/ml endothelial cell growth supplement (Calbiochem). All the media for cell culture were supplemented with 2 mM L-glutamine (HyClone), 100 mg/ml streptomycin (HyClone), and 100 U/ml penicillin (HyClone). All cells were maintained under humidified conditions in 95% air and 5% CO2 at 37 °C. Recombinant HGF (H5791), sodium acetate, lithium acetate (a GSK3β inhibitor) (46 (link)) and quercetin (β-catenin inhibitor) (47 (link)) were purchased from Sigma-Aldrich. XL184 (c-MET inhibitor) (48 (link)) was purchased from TargetMol.
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4

Leukemia Peptide Antigen Profiling

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Peptides were selected from leukemia splice variant sequence mutations based on binding affinity and immunogenicity (as predicted by NetMHC). The peptides used in this work were filtered to include only those that lack basic residues. These predicted peptide antigens and previously identified tumor associated peptide antigens were purchased from Bio-Synthesis (Lewisville, TX). Methanol (LC-MS grade), water (LC-MS grade), and formic acid (LC-MS grade) were purchased from Fischer Scientific (Fairlawn, NJ). Lithium acetate was purchased from Sigma-Aldrich (St. Louis, MO). Peptides were diluted to 1 μM in 60:40 methanol:water with 0.1% formic acid for direct infusion experiments. Lithium acetate, sodium acetate, or potassium acetate were added to the electrospray solution at 100 μM for generation of their respective [M+metal]+ and [M+H+metal]2+ species. Peptides were diluted in water to 100 ng/mL per peptide for liquid chromatography experiments.
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5

Faa1 Localization and Function Analysis

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Strains for in vivo analyses of Faa1 localization and function derive from genetic modification of S. cerevisiae w303. Knockouts and tags were obtained via homologous recombination of PCR products of interest. Briefly, log-phase cells were washed with lithium acetate (100 mM) and incubated in a mix containing lithium acetate (L6883; Sigma-Aldrich), PEG 2000 (202509; Sigma-Aldrich), salmon sperm DNA (15632011; Invitrogen), and the PCR product of interest at 30°C for 30 min and then shifted to 42°C for 20 min.
Strains were grown in a synthetic complete medium (0.17% [wt/vol] yeast nitrogen base without amino acids and ammonium sulfate [233520; BD] supplemented with 0.5% [wt/vol] ammonium sulfate [31119-M; Sigma-Aldrich], 2% [wt/vol] a-D-glucose monohydrate [16301; Sigma-Aldrich], and complete supplement [CSM] drop out [DCS0019; Formedium]). Log-phase cells were harvested, washed five times, and resuspended in SD-N medium (0.17% [wt/vol] yeast nitrogen base without amino acids and ammonium sulfate [233520; BD] and 2% [wt/vol] a-D-glucose monohydrate [16301; Sigma-Aldrich]). Based on the experiment, the SD-N medium was supplemented with cerulenin (219557, 50 µg/ml; Sigma-Aldrich) or glucose was reduced to 0.01% (wt/vol). Rapamycin (553210, 400 ng/ml; Calbiochem) was added to the synthetic complete medium.
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6

Synthesis of Semiconductor Nanocrystals

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Cadmium oxide (CdO, 99.99%, trace metals), trioctylphosphine (TOP, 90% technical grade), sulfur (S, 99.98%), 1-octadecene (ODE, 90%, technical grade), iso-Octane (99.7%, HPLC grade), 1-Octanethiol (> 98.5%), trimethylammonium chloride (TMACl, > 98%), potassium hydroxide (KOH, 99.99%), dimethyl sulfoxide (DMSO, > 99.9%) magnesium acetate tetrahydrate (99%), zinc acetate dihydrate (> 98%), lithium acetate (99.95%) and 1-butanol (anhydrous, 99.8%) were purchased from Sigma-Aldrich. Zinc acetate anhydrous (+ 99.9%) and ethyl acetate (> 99.5%, ACS certified) were purchased from Thermoscientific. Selenium (Se, 99.999%, metals basis) and oleic acid (90%, technical grade) were purchased from Alfa-Aesar. Octane (+ 99%, extra pure) was purchased from Acros Organics. All the reagents were used as received. Poly(ethylene dioxythiophene): polystyrene sulfonate (PEDOT: PSS) was purchased from Ossila. Poly[(9,9-dioctylfluorenyl-2,7-diyl)-co-(4,4’-(N-(p-butylphenyl)) diphenylamine)] (TFB) was purchased from American Dye Source. Polyvinylpyrrolidone (PVP10) with an average molecular weight of 10,000 was purchased from Sigma-Aldrich. Patterned ITO-glass substrates with 15 Ω resistance and 25.4 mm × 25.4 mm × 0.7 mm were purchased from Luminescence Technology Corp.
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7

Standard Yeast Transformation Protocol

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Cells were grown and selected for using standard molecular biology techniques (Sherman, 2002 (link)). Yeast transformations were performed using lithium acetate–based methods (Gietz et al., 1995 (link)). In brief, log phase cultures were transformed for 45 min at 42°C with the vector/PCR product in a mixture of ∼40% wt/vol PEG-3350 (Sigma-Aldrich), 0.1 M lithium acetate (Sigma-Aldrich), and 0.28 mg/ml SS carrier DNA (Sigma-Aldrich). Transformants were always selected for on appropriate synthetic media. Table S1 shows the strains used in this study.
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8

Sb Competent Cell Preparation and Transformation

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We used the Sb competent cell preparation and transformation protocol from [24 (link)], which is based on the protocol from [33 (link)]. After transformation, the cells were plated on appropriate growth/selection media. Sb strains cultured overnight in appropriate media (Yeast Extract–Peptone–Dextrose (YPD) or Yeast Synthetic Drop-out) in a shaking incubator (37 °C, 250 rpm). Saturated cultures were subinoculated to pre-warmed media at starting OD 0.25 and grown for 3–4 h to OD600 1.0 (37 °C, 250 rpm). Cells were then harvested at 3000g for 5 min at room temperature and washed twice with sterile water and third time before with 100 mM Lithium Acetate. Supernatant was then removed. Then, solutions were added to the cells in the following order: 260 μL 50% PEG3350 (Fisher Scientific), 36 μL 1 M Lithium Acetate (Sigma-Aldrich), 50 μL of 2 mg/mL single-stranded salmon sperm DNA (Invitrogen, 15632011), 0.1–10 μg DNA. The mixture was then gently vortexed and then incubated at 42 °C for 1 h. This mixture was then centrifuged at 3000g for 1 min and the supernatant was discarded. The cell pellet was resuspended in 1 mL YPD by gently pipetting up and down and this tube was placed at a shaking incubator (37 °C, 250 rpm) for 1 h. Then, the cell suspension was centrifuged for 1 min at 3000g, resuspended in 25 μL sterile water, and plated on an appropriate growth media.
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9

Platinum Catalyst Preparation and Characterization

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Platinum on aluminum oxide was purchased from Alfa Aesar (LOT: F02R004, precise platinum content=4.86 wt %). Lithium acetate, potassium acetate, cesium acetate, potassium hydrogen carbonate, and potassium carbonate were obtained from Sigma Aldrich with a purity of 99.99 % and dried prior to use/weighing (120 °C, vacuum, at least 2 h). Lithium hydroxide (Merck, >98 %), sodium hydroxide (Merck, >99 %), potassium hydroxide (Merck, >85 %, rest H2O, K2CO3<1 %), and cesium hydroxide (Fluka, 95 %, rest H2O) were used as stock solution, the amount of hydroxide was determined by titration with 1 m HCl (Merck).
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10

Steroid Analysis with Alkali Acetates

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Polyalanine, testosterone, androsterone, α-estradiol, β-estradiol, epiandrosterone, cortisone, corticosterone, 11-deoxycortisol, lithium acetate, sodium acetate, potassium acetate, rubidium acetate, cesium acetate, and water were purchased from Sigma-Aldrich (St. Louis, MO, USA). Aldosterone, dehydroepiandrosterone (DHEA), methanol, and acetonitrile were purchased from Fisher Scientific (Pittsburg, PA, USA). Polyalanine was prepared at 12.5 μg/mL in 50% acetonitrile and 0.1% formic acid. Steroid solutions contained 50 μM of the given steroid and 100–150 μM of lithium acetate, sodium acetate, potassium acetate, rubidium acetate, or cesium acetate.
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