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10 protocols using vac pic

1

Analyzing T cell Phenotype in Metastatic Lymph Nodes

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To measure T cell phenotype in metLNs, we set up four arms: saline, PR8, 4T1, and 4T1+PR8. In the saline group, we subcutaneously injected 10 ml saline into the mice thigh of tumor-naive mice. In the PR8 group, we inoculated 1 × 105 PFU UV-inactivated PR8 influenza virus + 2 μg anti-CD40 (Cat: BE0016-2; BioXCell) + 2 μg poly I:C (Cat: VAC-PIC; InvivoGen) via subcutaneous injection into the thigh of tumor-naive mice. 9–10 d later, we collected the draining lymph nodes in both groups for flow cytometry. In the 4T1 and 4T1+PR8 groups, we implanted 4T1 cancer cells into the fourth mammary fat pad. When the tumor reached 250 mm3, we dissected the primary tumor and randomized the mice into two groups. 5 d later, we inoculated 1 × 105 PFU UV-inactivated PR8 influenza virus + 2 μg anti-CD40 (Cat: BE0016-2; BioXCell) + 2 μg poly I:C (Cat: VAC-PIC; InvivoGen) in half of the mice (4T1+PR8 group) and saline in the other half of the mice (4T1 group) via thigh injection. Another 9 d later, draining lymph nodes were collected for flow cytometry.
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2

TriVax Vaccination for GARC-1-Specific T Cell Generation

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TriVax vaccination was used to generate GARC-1–specific T cells for adoptive transfer, and in separate experiments for therapeutic effect. The TriVax vaccine consists of 200 μg peptide GARC-1, 50 μg anti-mouse CD40 monoclonal antibody (Clone FGK4.5/FGK45; BE0016-2, Bio X Cell), and 50 μg poly-IC (vac-pic, InvivoGen). This vaccine was injected retro-orbitally to each mouse in 200 μL PBS. For the booster immunization, a quarter of the same dose was injected retro-orbitally to each mouse in 50 μL PBS.
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3

Immunogenicity Assessment of Altered ICAM1 Peptides

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Peptides (Peptide 2.0) were dissolved in DMSO at 10 mM and stored at −20°C. For vaccination, 50 μg of each SLP and 100 μg of poly(I:C) (Invivogen #vac-pic) were mixed with 100 μl of sterile 0.9% NaCl physiological saline and injected subcutaneously at the tail base. Vaccine injection regions were shaved at least 3 d before the cell inoculation to prevent inflammation. The mICAM1 (TVYNFSAL (wild type ICAM1: TVYNFSAP)) and p15E (KSPWFTTL) MHC-I epitope peptides were used for ELISA and CD8+ ELISPOT analysis. The original mICAM1 SLP (DQILETQRTLTVYNFSALVLTLSQLEVS), altered-1 mICAM1 SLP (DQILETQRTLTVYNFSALVFFLSQLEVS), altered-2 mICAM1 SLP (DQILETQRTLTVYNFSALVDDLSQLEVS) SLP and p15E SLP (GLFNKSPWFTTLISTIMGPLIILLLILL) were used for CD4+ ELISPOT analysis and vaccination. Underlined sequences represent altered amino acids.
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4

Mettl3 Conditional Knockout Mice Generation

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Mettl3 flox/flox mice were generated by inserting loxP sites spanning the fourth exon of Mettl3 via homologous recombination base on construction taken from Knockout Mouse Project Repository (KOMP). We next crossed Mettl3 flox/flox mice with Mx1-Cre mice to obtain induced hematopoietic conditional knockout mice. Deletion of Mettl3 was initiated using pIpC HMW (InVivogen, Vac-Pic) by intraperitoneal injections at a dose of 10 mg/kg on 2 consecutive days as showed previously (Liu et al., 2015 (link)). Mice used for this experiment were 8 to 12 weeks of age. Both male and female mice were used. All mice were housed on a 12:12 hr light:dark cycle at 25°Cand received water and chow ad libitum. All of the animal experiments were approved under the Institutional Animal Care and Use Committee.
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5

TLR Ligand Activation Assay

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The following ligands were used: Pam3CSK4 (TLR1/2; tlrl-pms; Invivogen, 200 ng/ml), FSL1 (TLR2/6; tlrl-fsl; Invivogen, 100 ng/ml), Poly (I:C) (TLR3; vac-pic; Invivogen, 10 μg /ml), LPS K12 (TLR4; tlrl-eklps; Invivogen, 200 ng/ml), Flagellin (TLR5; tlrl-stfla; Invivogen, 100 ng/ml), R837 (TLR7; tlrl-imqs; Invivogen, 10 μg/ml), R848 (TLR7/8; tlrl-r848; Invivogen, 100 ng/ml), CL075 (TLR8; tlrl-c75; Invivogen, 5 μg/ml), and CpG2006 (TLR9; tlrl-2006; Invivogen, 10 μM), and human interferon-beta 1a (100U/ml) was purchased from PeproTech GmbH (#300–02BC; Germany), 2’3’-cGAMP (InvivoGen, 1ug/ml), Lipofectamine 3000 (Invitrogen), diABZI STING agonist-1 (MedChemExpress, 1μM), Sendai Virus (Cantell Strain) (Charles River, 10 HA units/ml), and HSV-1 (MOI = 1), infected as previously described [28 (link)].
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6

Pregnancy Immunity Stimulation in Mice

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C57BL/6J mice were mated overnight, and females were checked for the presence of seminal plugs each morning, designated E0.5. On E7.5, pregnant mice were anesthetized and subjected to a single IM injection into the thigh muscle of the hind limb with 50 μl volume of PBS, 2 μg of mRNA-1273, or 50 μg poly(I:C). Vaccigrade HMW poly(I:C) (#vac-pic; InvivoGen, USA) was prepared at 1 mg/ml at room temperature (RT) and stored at ‒20°C, then thawed to RT prior to injection.
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7

In Vitro Stimulation of Baseline Blood

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Pre-vaccination (baseline) blood samples were stimulated in vitro (Milieu Interieur) with LPS (Invivogen - tlrl-3pelps), poly I:C (Invivogen - vac-pic), or SEB (Kindly given by Bernard Nocht Institute) with appropriate negative controls and incubated in TruCulture tubes within 15 minutes of blood collection, inserted into a dry block incubator, and maintained at 37°C (± 1°C) for 22 hours as described (13 (link), 17 (link)). Cell fractions were collected and lysed in Trizol for RNA extraction. cDNA was prepared using the SmartSeq 2 protocol as described above. Quantitative PCR (qPCR) was performed in triplicates for each sample targeting CDKN1CC and NDRG2 using ACTB as a housekeeping gene. The data were analyzed using the standard delta-delta Ct method (2-δδCt) in order to generate fold difference in gene expression values.
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8

Mettl3 Conditional Knockout Mice Generation

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Mettl3 flox/flox mice were generated by inserting loxP sites spanning the fourth exon of Mettl3 via homologous recombination base on construction taken from Knockout Mouse Project Repository (KOMP). We next crossed Mettl3 flox/flox mice with Mx1-Cre mice to obtain induced hematopoietic conditional knockout mice. Deletion of Mettl3 was initiated using pIpC HMW (InVivogen, Vac-Pic) by intraperitoneal injections at a dose of 10 mg/kg on 2 consecutive days as showed previously (Liu et al., 2015 (link)). Mice used for this experiment were 8 to 12 weeks of age. Both male and female mice were used. All mice were housed on a 12:12 hr light:dark cycle at 25°Cand received water and chow ad libitum. All of the animal experiments were approved under the Institutional Animal Care and Use Committee.
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9

Immune-Checkpoint and Combination Therapy

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For immune-checkpoint therapy in vivo, anti-PD1 monoclonal antibody (clone RMP1-14, BioXCell, BE0146) or rat IgG2a isotype control (clone 2A3, BioXCell, BE0089) was administered i.p. at 200 μg /200 μL PBS per mouse from day 3 post-tumor cell transplantation, every 3 days up to a maximum of six doses. For the combination therapy of poly(I:C) with anti-CTLA-4, mice received 50 μg / 50 μL of poly(I:C) (VacciGrade, InvivoGen, vac-pic) or 50 μL of PBS injected intratumorally on days 7 and 11 post-tumor cell transplantation, and either anti-CTLA-4 monoclonal antibody (clone 9D9, BioXCell, BP0164) or rat IgG2b isotype control (clone MPC-11, BioXCell BE0086) 50 μg / 200 μL i.p. on days 6 and 12.
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10

Isolation of Mitochondria and Cytosol

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Isolation of mitochondrial and cytoplasmic fractions was performed using Human Mitochondria Isolation Kit (Miltenyi Biotec, Germany). Briefly, THP-1 cells were stimulated with LPS (200ng/ml, tlrl-eklps; Invivogen) and Poly (I:C) (10μg/ml, vac-pic; Invivogen) for 24 hours following differentiation and then lysed with 1ml of ice-cold lysis buffer (provided with the kit) containing cOmplete™, Mini, EDTA-free Protease Inhibitor Cocktail (Roche, Mannheim, Germany) and PhosSTOP (Sigma, Darmstadt, Germany). Subsequently, cells were homogenized with a 26.5G syringe 20 times on the ice. The mitochondria were labeled with anti-TOM22 antibodies (Provided in the kit) and isolated according to the Miltenyi Biotec protocol. The supernatant cytosolic fraction was also collected during the magnetic separation process and stored at– 80°C until further use.
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