The largest database of trusted experimental protocols

54 protocols using tcs sp2 microscope

1

Colocalization Analysis of MUC1-CT, p-SMAD3, and act-β-catenin

Check if the same lab product or an alternative is used in the 5 most similar protocols
MUC1-CT, p-SMAD3 and act-β-catenin in ATII and fibroblasts were analyzed by immunofluorescence. Cells were firstly fixed in paraformaldehyde (4%) for 24 h. Following it, cells were permeabilized (20 mM HEPES at pH 7.6, 300 mM sucrose, 50 mM NaCl, 3 mM MgCl2, 0.5% Triton X-100), blocked (10% goat serum in PBS), and incubated with the primary antibodies overnight at 4°C, followed by secondary antibody anti-rabbit/mouse rhodamine/FITC- (1:100, Molecular Probes). Colocalization of MUC1-CT/ p-SMAD3 and MUC1-CT/ act-β-catenin was performed using a confocal spectral Leica TCS SP2 microscope with ×1000 magnification and 3× zoom. Red (HeNe 543 nm), green (HeNe 488 nm), and blue (Ar 351 nm, 364 nm) lasers were used. Colocalization studies were performed using the Leica confocal software v2.61. The cell images with colocalized points of the two laser canals were transformed into a white color.
+ Open protocol
+ Expand
2

BiFC Assays of Protein Interactions

Check if the same lab product or an alternative is used in the 5 most similar protocols
BiFC assays were performed as described previously (Lu et al., 2010; Meng et al., 2019). The CDSs of RH1, RH2, MtTT8 and MtWD40‐1 were cloned into the pEarleyGate 201‐YN or pEarleyGate 202‐YC vectors (Lu et al., 2010) using a Gateway recombination system. The prepared vectors were introduced into A. tumefaciens strain GV2260. Combinations of YN and YC plasmids together with plasmids mRFP‐AHL22 and P19 were agroinfiltrated into the leaves of 4‐wk‐old N. benthamiana plants. Signals were observed 3 d after infiltration by confocal microscopy (TCS SP2 microscope; Leica, Wetzlar, Germany). The primers used for plasmid construction are listed in Table S1.
+ Open protocol
+ Expand
3

Lipofectamine-Mediated BMP2 Gene Delivery

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lipofectamine transfection reagent (Invitrogen) was introduced to incorporate the BMP2 gene in our gene delivery system. The transfection steps followed the manufacturer’s standard protocol. In brief, the rat BMP2 sequence (NM_017178) was customized for incorporation into the TrueORF cloning vector (pCMV6-AC-GFP) with green florescence protein (GFP) located at the C-terminal of the BMP2 gene (OriGene Technologies, Md.). Then, 4 μg of DNA extracted from the TrueORF clone and 40 μL of Lipofectamine Plus were separately diluted in 400 μL OptiMEM medium. The 2 dilutions were mixed and incubated for 30 minutes. Then, 200 μL of the mixture was transferred into the well of culture dish that contained approximately 105 BMMSCs and incubated at 37°C for 6 hours. Later, transfected BMMSCs were loaded into PEG-PLLA scaffolds. The BMP2-transfected BMMSCs were monitored by observing the GFP expression under a Leica TCS SP2 microscope.
+ Open protocol
+ Expand
4

Confocal Microscopy Imaging of Transfected COS-7 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
For confocal microscopy imaging, COS-7 cells were transfected with the plasmids for 2 days. After the transfection, the cells were then treated with PBS containing 0.5% Tween 20 (PBS-T) three times for 10 min. The cells were then fixed with 1% paraformaldehyde (Sigma) supplemented with 0.1% Triton X-100 (Sigma). Following fixation, the cells were treated with polyclonal anti-Ct Ab and polyclonal anti-HPV16L2 Ab (1:200), respectively, and then incubated with FITC-conjugated goat anti-rabbit Ab (1:1000) for staining. The cells were subjected to 0.1 μg/ml of propidium iodide (PI) for 10 min to stain the nuclei. The stained cells were visualized under a Leica TCS SP2 microscope on glass slides (Germany).
+ Open protocol
+ Expand
5

Imaging X-gal and GFP Colocalization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Confocal images to probe colocalization of X-gal precipitates and GFP fluorescent signal were acquired using a Leica TCS SP2 microscope, as described (Levitsky et al., 2013 (link)). This technique, based on X-gal fluorescence emission and mathematical optical correction, allows to directly image X-gal staining on thick tissue sections by confocal microscopy. As there is not need to use specific antibodies against ß-gal, this technique has lower detection threshold, high specificity and reliability. Its use has been previously validated for the detection of GDNF-positive cells (Hidalgo-Figueroa et al., 2012 (link)). Using this technique, we systematically analyzed colocalization of X-gal perinuclear precipitates with anti-EGFP inmunofluorescent signal in at least three mice.
+ Open protocol
+ Expand
6

Histological Analysis of Intestine and Skin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Frozen sections of large intestine were prepared at 8μm thickness and fixed in 4% paraformaldehyde. Sections were counterstained with 4′6′-diamidino-2-phenylindole dihydrochloride (DAPI) and mounted using Fluoromount-G (Southern Biotechnology). Monoclonal antibodies were as listed in Table 1. Confocal images were obtained using a Leica TCS-SP2 microscope equipped with 405, 488, 594 and 647 nm lasers and image analysis was done in Adobe Photoshop.
Skin was fixed in neutral buffered formalin (Sigma) and tissue sections were stained with H&E for histopathology analysis. Epidermal and scale thickness was quantified as previously described (17 (link)).
+ Open protocol
+ Expand
7

Co-localization of PARP1 and E2F1

Check if the same lab product or an alternative is used in the 5 most similar protocols
For co-localization studies, 5·104 per cm2 HEK293 cells were seeded on EZ-multiwell slides (Millipore, Burlington, MA, USA). Cells were transfected using equimolar quantities of pEGFP-PARP1 (a gift from A. Chiarugi) and pRFP-E2F1 (a gift from B. Su) and synchronized by double thymidine treatment. Upon release from cell cycle block, cells were fixed with 2% paraformaldehyde (pH 7.4), nuclei were counterstained using DAPI (Invitrogen, Waltham, MA, USA), and fluorescent images from three independent experiments were obtained using a Leica TCS SP2 microscope.
+ Open protocol
+ Expand
8

Analyzing Cell Number and Size in Transgenic Buds

Check if the same lab product or an alternative is used in the 5 most similar protocols
ImageJ was used to analyse cell number and size. Briefly, sections from TRV2-PsMYB65, TRV2 control, pCVA, and OE-PsMIR159 transgenic buds after 20 DAI were imaged by Leica TCS-SP2 microscope. Then, three sections from each of three transgenic buds were used to calculate cell number and size.
+ Open protocol
+ Expand
9

Confocal Microscopy Imaging Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Images were acquired using a Leica TCS SP2 microscope with 405 diode, He/Ne and Ar/Kr lasers.
+ Open protocol
+ Expand
10

Aortic Valve Calcification in Atherosclerosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Three male apolipoprotein E knockout mouse hearts (ApoE−/−, age 10 months, on a C57BL/6 background, Jackson Laboratory, Bar Harbor, ME) and three, 2 month old female wild type (WT) mouse hearts (C57BL/6 mice, Jackson Laboratory, Bar Harbor, ME) were donated by the Jaffe Lab at Tufts Medical Center. The hearts were stored in 1× PBS during transport, valve isolation and imaging, which occurred within 24 hours from mouse sacrifice. The ApoE−/− mice were fed a high fat diet for 9 weeks before being sacrificed. This model has been previously shown to induce heart valve calcification as measured by von Kossa53 (link) and alkaline phosphatase-positive staining.79 TPEF image stacks were acquired at 460 ± 20 nm and 525 ± 25 nm from two distinct regions of the aortic valve of each mouse using the Leica TCS SP2 microscope at an excitation of 800 nm. Each image stack consisted of 5 to 34 optical sections acquired with a step size of 5 μm. The relative MAF contribution for each section was calculated and then averaged from all sections of a given image stack. MAF values for each of the six valves (three ApoE−/− and three WT valves) were calculated by averaging measurements from both Z stacks.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!