The largest database of trusted experimental protocols

Texas red 1 2 dihexadecanoyl sn glycero 3 phosphoethanolamine

Manufactured by Thermo Fisher Scientific
Sourced in Italy

Texas Red 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine is a fluorescent dye used for labeling and detecting biological molecules. It is a lipophilic dye that can be incorporated into lipid-containing structures, such as cell membranes and liposomes. The dye has an excitation maximum at 595 nm and an emission maximum at 615 nm, providing a red fluorescent signal.

Automatically generated - may contain errors

6 protocols using texas red 1 2 dihexadecanoyl sn glycero 3 phosphoethanolamine

1

Lipid Composition for Membrane Studies

Check if the same lab product or an alternative is used in the 5 most similar protocols
1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), 1,2-dioleoyl-sn-glycero-3phosphoglycerol (DOPG), 1′,3′-bis[1,2-dioleoyl-sn-glycero-3-phospho]-glycerol (18:1 CL), 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[biotinyl(polyethylene glycol)-2000 (DSPE-PEG-biotin), and 1,2-dioleoyl-sn-glycero-3-[(N-(5-amino-1-carboxypentyl)iminodiacetic acid)succinyl] (DGS-NTA) were from Avanti Polar Lipids. Texas Red 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine (DHPE-TexasRed) was from Invitrogen.
+ Open protocol
+ Expand
2

Lipid Bilayer Formation on Nanopillar Arrays

Check if the same lab product or an alternative is used in the 5 most similar protocols
We used fluorescence-labeled supported lipid bilayer on gradient nanopillar arrays to reference the surface area at each radius. The supported lipid bilayer made of Egg-PC (Avanti) and doped with 0.5 mol% of Texas Red-1,2-Dihexadecanoyl-sn-Glycero-3-Phosphoethanolamine (Invitrogen) was prepared using a protocol as previously described36 (link). Briefly, lipids were dissolved and mixed in chloroform. Then the lipid mixture was dried in clean glass tubes with nitrogen and desiccated overnight. To prepare lipid vesicles, 1mg of lipid mixture was suspended in 400uL PBS buffer and extruded through 100 nm Nucelpore® membrane filter using Avanti Polar Lipid Extruder and Hamilton syringes. Then the lipid vesicle solution was 5-time diluted in PBS buffer and applied to the nanostructure substrate freshly cleaned by 1hr air plasma. After 15 min of incubation with the vesicles, the substrate was washed with 0.5 mL PBS buffer to remove free vesicles before testing. Imaging was taken by epi-fluorescence microscope (Leica DMI 6000B).
+ Open protocol
+ Expand
3

Lipid-based Nanoparticle Formulation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The
lipids 1,2-dioleoyl-3-trimethylammonium-propane
(DOTAP), 1,2-dioleoyl-sn-glycero-3-phosphocholine
(DOPC), and 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[amino(polyethylene glycol)-2000] (DSPE-PEG) solubilized
in chloroform were purchased from Avanti Polar Lipids and used as
received. Poly-l-lysine solution 0.1% (w/v) in water was
purchased from Sigma-Aldrich. GFP plasmid (pCMV-GFP), obtained through
Addgene, was a gift from Connie Cepko (Addgene plasmid #11153).33 (link) The dye Atto 488-NHS was purchased from ATTO-TEC
GmbH. Texas Red 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine,
triethylammonium salt (Texas Red-labeled lipid), and the dye YOYO-1
were purchased from ThermoFisher Scientific Inc. All the aqueous solutions
were prepared with DNase-free and RNase-free Milli-Q water.
+ Open protocol
+ Expand
4

Lipid Bilayer Formation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
POPC, DPhPC, DPPC, cholesterol and Ni-NTA- DGS were purchased from Avanti Polar Lipids (Alabaster, AL). Texas Red 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine, triethy-lammonium salt (Texas Red DHPE) and Alexa 488 C3 maleimide were purchased from ThermoFisher Scientific (Waltham, MA). His-tagged Human serum albumin was obtained from ACRO Biosystems (Newark, DE). Dithiothreitol (DTT) was purchased from Roche (Branford, CT). Human serum albumin, sucrose, glucose, uranyl acetate, methanol, acetic acid (glacial, ≥99.85%), and tris(2-carboxyethyl) phosphine hydrochloride (TCEP) were obtained from Sigma-Aldrich (St. Louis, MO). MOPS, NaCl, and Amicon Ultra-0.5 mL centrifugal filters (100 kDa MWCO) were obtained from EMD Millipore (Billerica, MA). Tris-HCl was obtained from J.T. Baker-Avantor Performance Materials (Center Valley, PA). ITO coated glass slides (100 ohm/sq) were obtained from Nanocs (New York, NY). Horizontal ATR germanium crystal (45° angle) and multiple reflection ATR accessory units were obtained from Pike Technologies (Madison, WI).
+ Open protocol
+ Expand
5

Lipid-Oil Vesicle Preparation with Fluorescent Marker

Check if the same lab product or an alternative is used in the 5 most similar protocols
To prepare the solutions, 1,2-Dioleoyl-sn-glycero-3-phosphocholine (DOPC) as solutions in chloroform and 1,2-dioleoyl-sn-glycero-3-phospho-rac-(1-glycerol) sodium salt (DOPG) were purchased from Avanti Polar Lipids. Texas Red 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine, triethylammonium salt (Texas Red-DHPE), and calcein (>93%) were purchased from Thermo Fisher Scientific (Monza, Italy). chloroform, 1-octanol, and glycerol were acquired from Honeywell (Milan, Italy), and sucrose ultrapure was obtained from VWR-Life Science. Milli-Q water obtained using a purification system (Fulltech Instruments, Rome, Italy) was used for the preparation of all aqueous solutions.
The lipid mixture (DOPC:DOPG in a 1:1 ratio with 0.1 mol% Texas Red-DHPE) was dissolved in chloroform in a glass vial. chloroform was evaporated under a gentle stream of nitrogen, and the lipids were further dried by desiccating for at least 1 h. After adding octanol in order to achieve a final lipid concentration of 15 mg/mL, the lipid–oil solution (LO) was sonicated for 30 min and then filtered using 0.45 µm syringe filters. The internal aqueous solution (Wi) was 600 mM sucrose with 0.05 mM calcein, and the external aqueous solution (We) was 600 mM glucose.
+ Open protocol
+ Expand
6

Preparation of Fluorescent Nanoparticles and Liposomes

Check if the same lab product or an alternative is used in the 5 most similar protocols
A commercially available solution of suspended 50 nm diameter PS NPs labeled with red fluorescence dye (Ex/Em: 542 nm/612 nm; Fluoro‐Max, Thermo Fisher) was used. The solution of PS NPs was diluted 1000 times with deionized (DI) water to lower the concentration to 10 ppm, resulting in an electric conductivity of 1 µS cm−1. Regarding the SUV solution, SUVs containing FL dye‐labeled lipids, Texas Red 1,2‐dihexadecanoyl‐sn‐glycero‐3‐phosphoethanolamine (Ex/Em: 590 nm/610 nm; Thermo Fisher), and 1,2‐dioleoyl‐sn‐glycero‐3‐phosphocholine (Avanti Polar Lipids) were dissolved at a molecular ratio of 1:99 in chloroform at 0.1 mg mL−1 for FL visualization. The rapid solvent exchange method[27] was employed to change the chloroform to DI water, resulting in spherical lipid balls in the form of multilamellar vesicles. To normalize the size of the lipids into 50 nm diameter unilamellar‐shaped liposomes, the solution was extruded 20 times through polycarbonate membranes with a pore size of 50 nm, resulting in a uniformly sized 50 nm SUV with a final concentration of 1 ppm and an electric conductivity of 1 µS cm−1. To measure the electrical conductivity, a conductivity meter (LAQUAtwin EC‐33, Horiba) was used.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!