The largest database of trusted experimental protocols

U6 small nuclear rna rnu6b

Manufactured by RiboBio

U6 small nuclear RNA (RNU6B) is a non-coding RNA molecule that is a component of the small nuclear ribonucleoprotein (snRNP) complex. It plays a core role in the splicing of pre-mRNA by the spliceosome, a process that removes non-coding introns and joins coding exons together.

Automatically generated - may contain errors

2 protocols using u6 small nuclear rna rnu6b

1

Quantification of miR-141 and its transcripts

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was isolated from tissue samples and cell lines using TRIzol reagent (Invitrogen) according to the manufacturer’s protocol. The levels of mature miR-141 (miR-141) and precursor miR-141 (pre-miR-141) were evaluated using the miDETECT A Track miRNA qRT-PCR Kit (RiBoBio). The U6 small nuclear RNA (RNU6B) (RiBoBio) was used for normalization. The expression of primary miR-141 transcript (pri-miR-141), c-Myc and BRD7 was measured by qRT-PCR according to the instructions of the SYBR Premix Ex Taq (TaKaRa, Dalian, China). The GAPDH mRNA level was used for normalization. The relative expression ratio was calculated using the 2−ΔΔCT method. The primers for miR-141, pre-miR-141, U6, pri-miR-141, c-Myc, BRD7, and GAPDH were described previously [23 (link)]. PCRs of each sample were conducted at least in triplicate.
+ Open protocol
+ Expand
2

Quantification of miRNA Expression Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was isolated from tissue samples and cell lines using TRIzol reagent (Invitrogen) according to the manufacturer's protocol. The expression level of mature miR-141 and pre-miR-141 was evaluated using the miDETECT A Track miRNA qRT-PCR Kit (RiBoBio) following the manufacturer's protocol. The U6 small nuclear RNA (RNU6B) (RiBoBio) was used for normalization. The expression level of pri-miR-141 was measured by qRT-PCR according to the instructions of the SYBR Premix Ex Taq (TaKaRa, Dalian, China). The GAPDH mRNA level was used for normalization. The relative expression ratio of mature miR-141, pre-miR-141 and pri-miR-141 was calculated using the 2−ΔΔCT method. The primer for mature miR-141 was 5′-TAACACTGTCTGGTAAAGATGG-3′ (forward). Primer for pre-miR-141 was 5′-TTGGATGGTCTAATTGTGAAGCTCC-3′ (forward). Primer pairs for U6 were 5′-ATTGGAACGATACAGAGAAGATT-3′ (forward) and 5′-GGAACGCTTCACGAATTTG-3′ (reverse). Primer pairs for pri-miR-141 were 5′-AGACCTCACCTGGCCTGTGGCC-3′ (forward) and 5′-GAACCCACCCGGGAGCCATCTT-3′ (reverse). Primer pairs for GAPDH were 5′-CGAGATCCCTCCAAAATCAA-3′ (forward) and 5′-TTCACACCCATGACGAACAT-3′ (reverse). PCRs of each sample were conducted in triplicate.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!