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4 protocols using goat anti rabbit igg conjugated to hrp

1

Caspase-3 activation in A549 cells

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A549 cells were seeded at 0.8x106 cells per 35mm dish and grown to confluency. Cells were infected for 1 h with AdEmpty or AdFAST at an MOI of 10. As positive control, cells were treated with 100 μM etoposide for 24 hr or 1 μM staurosporine for 6 hr. Whole cell lysates were collected at varying time post-infection with 2x Laemmli loading buffer (62.5mM Tris HCl pH 6.8, 25% glycerol, 2% SDS, 0.01% bromophenol blue, 5% β-mercaptoethanol). Samples were resolved by 15% SDS-PAGE and transferred onto a PVDF membrane (Millipore). Membranes were probed with rabbit anti-cleaved caspase-3 monoclonal antibody (1:1000, Cell Signaling #9664) or full-length caspase 3 (1:1000, Cell Signaling #9662) and 1:5000 goat anti-rabbit IgG conjugated to HRP (Bio-Rad #170–6515). Alpha-tubulin was used as a loading control (1:5000, CalBiochem #CP06, 1:10 000 goat anti-mouse IgG conjugated to HRP, Bio-Rad #170–6516). Blots were developed and densitometry was conducted as described above.
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2

Antibody-based Protein Expression Analysis

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All antibodies were commercially produced, tested, and recommended for the application. The primary capture antibodies in the ELISA analyses were rabbit anti-human ferroportin peptide (ab58695; Abcam, Cambridge, UK), rabbit anti-human IRP2 (LS-C80347, LifeSpan Biosciences, Seattle, WA, USA), rabbit anti-human HIF2 (ab73895; Abcam, Cambridge, UK). Mouse anti-human Immunoglobin G (IgG) conjugated with horseradish peroxidase (HRP; #55788; BD, Franklin Lakes, NJ, USA) was used as secondary capture antibody. The primary antibody used in the Western blot analyses was a rabbit anti-human ferroportin (NBP1-21502; Novus Biologicals, Littleton, MA, USA). A rabbit anti-human β-actin antibody (ab8227; Abcam, Cambridge, UK) was used as loading control. For Western blot analyses, the secondary antibody was goat anti-rabbit IgG conjugated to HRP (Bio-Rad, Sundbyberg, Sweden). Primary and secondary antibodies were used at 1 μg/mL.
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3

Quantifying Adenoviral Protein Expression

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293 and A549 cells were seeded at 1x106 and 0.8x106 cells per 35mm dish, respectively. Next day, the cells were infected for 1 h at a multiplicity of infection (MOI) of 10 with AdEmpty or AdFAST-HA. Following a 48 h incubation, whole cell lysates were collected using the cell lysis buffer as described by Lieber et al. [27 (link)]. Samples were separated by 15% SDS-PAGE and transferred onto a polyvinylidene fluoride (PVDF) membrane (Millipore). The resulting membrane was probed with a mouse anti-HA tag monoclonal antibody (1:1000, Cell Signaling #2367) and goat anti-mouse antibody conjugated to horseradish peroxidase (HRP) (1:10 000, Bio-Rad #170–6516). To confirm Ad replication, the membrane was reprobed for Ad5 fibre (1:20 000 mouse anti-fibre monoclonal antibody, clone 4D2, Neomarkers). The membrane was also probed with antibody to α-tubulin to confirm equal loading (1:5000 rabbit anti-α-tubulin antibody, AbCam #ab15246, 1:5000 goat anti-rabbit IgG conjugated to HRP, Bio-Rad #170–6515). Blots were developed using the Pierce Enhanced Chemilumescent (ECL) Western Blotting Substrate (Thermo Scientific). Densitometry was performed using AlphaEaseFC (Alpha Innotech).
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4

Western Blot Analysis of Viral Proteins

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Cells were lysed in RIPA lysis buffer [150 mM NaCl, 1% Non-ionic detergent, 1% Sodium deoxycholate, 0.1%SDS, (Biomax, Republic of Korea)]. About 20 μg of proteins per sample were separated by SDS-PAGE using a 10%polyacrylamide gels and transferred to nitrocellulose membranes (Cytiva, USA). Membranes were blocked with 10% (w/v) non-fat dry milk in TBST buffer [100 mM Tris (pH 7.6), 150 mM NaCl, 0.1% (w/v) Tween-20] for 1 h at room temperature. Membranes were incubated with a 1:1,000 dilution of rabbit polyclonal anti-Gag antibody, 1:500 dilution of rabbit polyclonal anti-Env antibody, 1:5,000 dilution of rabbit monoclonal GFP antibody (Abcam, UK), and 1:5,000 dilution of rabbit monoclonal β-actin antibody (Cell Signaling Technology, USA) at 4°C overnight. The membranes were then incubated with a 1:10,000 dilution of secondary antibody, goat anti-rabbit IgG conjugated to HRP (BioRad, USA), for 1 h at room temperature. The chemiluminescent signal was visualized by exposing the blots to a chemiluminescence imaging system, E-blot (e-BLOT Life Science, China). Rabbit polyclonal anti-Env antibody was designed to be specific for PFV Env-SU domain and was custom-produced by AbClon (Korea).
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