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2 protocols using mouse monoclonal antibody against cox 4

1

Immunofluorescence and Western Blot Protocols

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Primary antibodies included a human anti-nuclear antibody derived from autoimmune human serum that was determined to stain the nuclear lamina used at a 1:100 dilution, a mouse monoclonal antibody against COX IV from Abcam (Eugene, OR) used at a 1:1000 dilution, a rabbit polyclonal antibody against AIF (Cell Signaling, Danvers, MA) used at a 1:250 dilution for immunofluorescent microscopy, a mouse monoclonal antibody from Santa Cruz Biotechnology against AIF (sc-13116, Santa Cruz, CA) used for western blotting, a mouse monoclonal antibody against β-Actin (A5316, Sigma/Aldrich, St. Louis, MO) used for western blotting, a polyclonal rabbit anti-PAR antibody (#551813) from BD Pharmingen (San Jose, CA) used at a 1:400 dilution for microscopy and 1:2000 dilution for western blotting, a polyclonal goat anti-PARP-1 (N-20, Santa Cruz, CA) used at a 1:1000 dilution. Secondary antibodies used for immunofluorescence microscopy were anti-mouse or anti-rabbit whole IgG conjugated to Alexa Fluor 488 (AF488) or Alexa Fluor 568 (AF568) from Invitrogen used at 2 μg per ml. Secondary antibodies used for western blot analysis were anti-rabbit or anti-goat conjugated to horseradish peroxidase from Jackson ImmunoResearch Laboratories (West Grove, PA) and used at a concentration of 0.1 μg per ml.
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2

Apoptosis Pathway Analysis Protocols

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TUNEL assay kit was purchased from Promega (Madison, WI). MTT, TTC, JC-1, DCFH-DA, Hoechst 33342, rabbit polyclonal antibody against Bax, Bcl-2, Bcl-xL, AIF, or histone H1, mouse monoclonal antibody against β-Tubulin III, or β-actin were purchased from Sigma (St. Louis, MO). Mouse monoclonal antibody against Cytochrome C was purchased from BD Pharmingen (San Diego, CA). Rabbit polyclonal antibody against cleaved caspase-3 (Asp175) was purchased from Cell signaling Technology (Danvers, MA). Rabbit polyclonal antibody against caspase-3 and mouse monoclonal antibody against COX IV was purchased from Abcam (Cambridge, Mass., UK). IRDye 800 conjugated goat anti-mouse IgG or donkey anti-rabbit IgG was purchased from Rockland (Gilbertsville, PA). Mammalian protein extraction reagent (M-PER), tissue protein extraction reagent (T-PER), nuclear and cytoplasmic extraction reagents (NE-PER), mitochondria isolation kit and Coomassie plus Bradford assay kit were purchased from Thermo Scientific Pierce (Rockford, IL). All standard culture reagents were obtained from Gibco (Grand Island, NY).
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