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Diaminobenzidine substrate

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Diaminobenzidine substrate is a chemical reagent used in various biochemical and histological applications. It serves as a chromogenic substrate for the detection and visualization of enzyme activity, particularly in immunohistochemistry and enzyme-linked immunosorbent assays (ELISA). The reaction catalyzed by the enzyme results in the formation of a brown-colored precipitate, which can be observed and quantified using microscopy or spectrophotometric techniques.

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16 protocols using diaminobenzidine substrate

1

Histological and Immunohistochemical Assessment of Tumor Samples

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To evaluate the histological changes, paraffin-embedded tumor blocks were sectioned at 5-µm thickness and stained with hematoxylin and eosin (H&E; Vector Laboratories Inc, CA, USA), followed by observation under a light microscope (Eclipse C; Nikon, Tokyo, Japan) at the Core Facility Center for Tissue Regeneration (Dong-eui University). For immunohistochemistry, sections were dewaxed, rehydrated, and boiled in antigen retrieving buffer (10 mM sodium citrate/0.05% Tween 20, pH 6.0) for 20 minutes. Sections were incubated with anti-MCM7 antibody (Santa Cruz Biotechnology) at 4°C overnight and further incubated with HRP-conjugated goat anti-mouse Immunoglobulin G (Santa Cruz Biotechnology) for 1 hour at room temperature, developed with diaminobenzidine substrate (Sigma-Aldrich). After counterstaining with hematoxylin, the sections were photographed under a light microscope (Eclipse C; Nikon).
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2

Immunohistochemical Analysis of EMT Markers

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Paraffin-embedded sections (4 µm) were deparaffinized and treated with 0.3% (v/v) hydrogen peroxide to block endogenous peroxidase activity. Then, heat-induced antigen retrieval was performed using 0.01 M sodium citrate (pH 6.0) and 10% (v/v) bovine serum albumin (Sigma-Aldrich; Merck KGaA) in PBS for 10 min at room temperature. Sections were then incubated overnight at 4°C with mouse monoclonal antibodies (1:50) against IGFBP7 (cat. no. ab74169; Abcam, Cambridge, UK), E-cadherin (cat. no. ab1416; Abcam), N-cadherin (cat. no. ab18203; Abcam) and Vimentin (cat. no. ab8069; Abcam) overnight at 4°C. A streptavidin-biotin-peroxidase complex kit (SABC kit; Zymed) was used to detect the protein conjugates, according to the manufacturer's protocol. The sections were developed using a diaminobenzidine substrate (Sigma-Aldrich; Merck KGaA) and counterstained with hematoxylin. Negative controls (NCs) were run in parallel; however, PBS or mouse IgG1 (AMS/Immunokontact) was applied.
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3

Quantifying Tumor Cell Proliferation

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After fixation in 4% formalin, the tumor xenografts were embedded in paraffin and cut into 4-μm sections. The sections were incubated with anti-Ki67 antibody (1:200, Abcam, Cambridge, UK) at 4°C overnight. Then, using biotinylated secondary antibodies to incubate for 1h at room temperature, visualized with diaminobenzidine substrate (Sigma-Aldrich, St Louis, MO, USA). Immunohistochemistry (IHC) images were taken using an Olympus microscope.
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4

Immunohistochemical Analysis of Foxp3+ Cells

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Animals were transcardially perfused with 4% formalin (Chempur, Piekary Slaskie, Poland). The CNS and spleen were removed, post-fixed for 2 days in 4% formalin solution, and embedded in paraffin. Sections (10 µm thick) were placed onto glass slides (Menzel-Glaser, Braunschweig, Germany). Slides with paraffin-embedded sections were deparaffinized by immersion in xylene (Sigma, Poznan, Poland), followed by rehydration in ethanol (POCH, Gliwice, Poland). Antigen retrieval was done with 10 mM citrate buffer, pH 6.0 (Sigma, Poznan, Poland). Tissue sections were incubated overnight at 4°C, with primary rat anti-Foxp3 antibody (eBioscience Inc., San Diego, CA, USA) at 1:500 dilution. Secondary biotinylated rabbit anti-rat antibodies were purchased from DAKO North America Inc. (Carpinteria CA, USA) and ABC kit from Vector Laboratories (Peterborough, United Kingdom). Staining was performed using diaminobenzidine substrate (Sigma, Poznan, Poland) and counterstaining was done with hematoxylin-eosin (Sigma, Poznan, Poland).
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5

Immunohistochemical Analysis of CHOP, GFP, and Vaspin

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The tissue cross-sections were labeled with mouse monoclonal anti-CHOP (1:300; Cell Signaling Technology, Inc., Danvers, MA, USA; cat. no. 2895), mouse monoclonal anti-GFP (1:300; Cell Signaling Technology; cat. no. 2955), and goat monoclonal anti-vaspin (1:200; Santa Cruz Biotechnology, Inc., Dallas, TX, USA; cat. no. sc-79815) at 4°C overnight, following microwave antigen retrieval in citrate buffer. After washing with PBS with Tween 20 (PBST), the tissue samples were incubated with rabbit anti-mouse (1:200; Gene Tech Biotechnology Co., Ltd., Shanghai, China; cat. no. GK500705) and donkey anti-goat secondary antibodies (1:200; Santa Cruz Biotechnology, Inc.; cat. no. sc-2042) at 37°C for 1 h, and then incubated with diaminobenzidine substrate (0.05%; Sigma-Aldrich) for 1–3 min. Specimens were counter-stained with hematoxylin and images were captured under a Leica DMI6000 microscope. Three sections from each animal were stained for lesion quantification, which was expressed as a percentage of total lesion area. Data are presented as the mean ± standard error of the mean (SEM).
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6

Immunohistochemical Analysis of Ki67 Expression

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The tumor tissue was prepared into paraffin sections. Different xylenes (xylene I, xylene II) and gradient ethanol were used for staining pretreatment. Then, EDTA antigen repair solution was used for microwave repair, and endogenous catalase blockers were dripped to block it. Next, it was incubated with Ki67 antibody (ab15580, Abcam, UK) at 4°C overnight, followed by incubation with secondary antibodies at room temperature for 1 h before being observed with a diaminobenzidine substrate (Sigma, USA). The immune tissues were observed and photographed using a fluorescence inverted microscope.
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7

Immunohistochemical Analysis of Tumor Xenografts

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After fixing in 4% formalin for 48 h, the tumor xenografts were then embedded in paraffin and sectioned at 4-μm. Subsequently, the sections were deparaffinized, rehydrated and incubated with anti-Ki67 (1:200, Abcam, Cambridge, UK) and anti-pERK antibody at 4°C overnight. Then, we added biotinylated secondary antibodies to tissues for 1 h at room temperature and then visualized with diaminobenzidine substrate (Sigma-Aldrich, St Louis, MO, USA). Immunohistochemistry (IHC) images were taken using an Olympus microscope.
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8

Immunohistochemical Evaluation of REV7 Expression

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All tissues were fixed in 10% formalin, embedded in paraffin, and cut into 5‐μm sections. The sections were deparaffinized in xylene and rehydrated in graded concentrations of ethyl alcohol. Antigen retrieval was performed by heating the sections in a microwave oven for 10 minutes with .01 mol/L citrate buffer (pH 6.0). Endogenous peroxidases and nonspecific reactions were blocked with 3% hydrogen peroxide and 5% BSA for 30 minutes, respectively. The sections were then incubated with an anti–REV7 antibody (Abcam, Cambridge, UK) at a dilution of 1:100 overnight. Labeling for REV7 was detected using biotinylated secondary antibodies, visualized with diaminobenzidine substrate (Sigma‐Aldrich, St Louis, MO, USA), and counterstained with hematoxylin (Sigma‐Aldrich). All steps were performed at room temperature. As a negative control, PBS was used in the absence of the primary antibody, confirming the specificity of this antibody. Immunostained slides were evaluated by 2 independent observers using light microscopy in a blinded manner. Immunohistochemistry (IHC) images were taken using an Olympus microscope. aScores were evaluated in a range of 0‐3 points at intervals of .2 points. Counts of IHC staining (Ki67 and CD31) were performed in images at a magnification of ×20, and cases were regarded as positive only if both observers independently defined them as such.
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9

Immunohistochemical Analysis of Ki67, MET, and p-AKT

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All tissues were cut into 4-μm sections. The sections were incubated with an anti-Ki67 antibody (1:200, Abcam, Cambridge, UK), MET antibody (1:200, GeneTex, GTX50668) and p-AKT antibody (1:200, GeneTex, GTX128414) at 4 °C overnight. Then, biotinylated secondary antibodies were incubated for 1 h at room temperature and visualized with diaminobenzidine substrate (Sigma-Aldrich, St. Louis, MO, USA). Immunohistochemistry (IHC) images were taken using an Olympus microscope.
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10

Immunohistochemical Analysis of Pannexin Expression in Musculoskeletal Tissues

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Frontal sections of paraffin embedded knees and long bones were used for immunohistochemical analysis. Sections were dewaxed and re-hydrated as previously described [25 (link), 31 (link), 30 ]. Custom-made site-directed anti-Panx1 (CT-395) and anti-Panx3 (CT-379) antibodies (reported earlier by [27 (link)]) targeting mouse pannexin sequences and commercial anti-MMP13 (Protein Tech, Chicago, IL, USA) and anti-Collagen II (Fitzgerald, Acton, MA, USA) primary antibodies were used for immunolabeling. HRP-conjugated goat anti-rabbit secondary antibodies (Biorad, Hercules, CA, USA) were used with diaminobenzidine substrate (Sigma) to reveal immunopositive staining. Methyl Green (Sigma) was used to counterstain sections.
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