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Dextran 488

Manufactured by Thermo Fisher Scientific

Dextran-488 is a fluorescently-labeled polysaccharide compound used as a molecular weight marker and tracer in various biochemical and cell biology applications. It has an excitation maximum at 488 nm and an emission maximum at 520 nm, corresponding to the green region of the visible spectrum.

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5 protocols using dextran 488

1

Dextran Uptake and Endosomal Localization

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For dextran uptake, cells with or without treatment were incubated with 100 μg/ml Dextran-568, or Dextran-488 (10,000 MW, Anionic, Fixable, ThermoFisher Scientific) for 30 min at 37 °C. After washing with PBS, cells were fixed with 4% paraformaldehyde (PFA), washed with PBS, and stained for actin with Phalloidin-488 (Thermo Fisher Scientific, A12379), for 20 min at room temperature. After washing with PBS for three times, cells were dried in dark, and mounted with ProLong® Gold Antifade Mountant (Thermo Fisher Scientific, P36930) before imaging with Zeiss LSM confocal microscope.
Immunofluorescent analysis has been previously described by us (Das et al., 2015 (link); Yu, Nie, et al., 2014; (link)
Yu, Yehia, et al., 2014 (link)). Briefly, cells with or without treatment were washed with PBS twice and fixed with 4% PFA at room temperature for 15 min. Cells were then washed with PBS and blocked with 10% donkey serum in PBS with 0.1% Triton X-100 for 1 hr at room temperature. Cells were incubated with EEA1 antibody (Cell Signaling Technology, Beverly, MA, #3288), at 1:200 dilution in blocking buffer over-night at 4 °C. Cells were washed with PBS and incubated with Alexa-555 conjugated anti-rabbit secondary antibody (1:500) and Phalloidin-Alexa-488 (1:3000) at room temperature for 1 hr before washing and mounting.
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2

Drosophila Embryo dsRNA Injection

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For dsRNA injection experiments, embryos were collected within 1 h of egg laying, dechorionated in bleach, rinsed and aligned on coverslips coated with heptane glue. Embryos were desiccated for 5–6 min and covered with Halocarbon 200 oil and injected with RNAse-free water or dsRNA (5 μM concentration). Post injected embryos were stored at 18 °C prior to imaging.
Dextran 568 (5 mg/ml; 10,000 MW; Invitrogen), Dextran 488 (5 mg/ml; 70,000 MW; ThermoFisher) were injected on the perivitelline space at the end of cellularization.
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3

Macropinocytosis Regulation by Growth Factors

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Cells grown on glass coverslips to 30%–40% confluency were serum-starved overnight and then stimulated with EGF or Nrg for 30 min. Dextran-488 (Oregon Green 488; 70,000, anionic, lysine-fixable) or BSA-488 (Alexa fluor 488 conjugate) (Thermo Fisher) was added at a concentration of 0.5 mg/mL with growth factors. Cells were rinsed three times with cold PBS and fixed with 4% paraformaldehyde. To measure constitutive macropinocytosis, Dextran-488 was added to complete growth medium for 30 min. For costaining with Rab7, cells were permeabilized with 0.2% TX-100 prior to staining.
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4

Dextran-488 Labeling of NIH-3T3 Cells

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NIH-3T3 cells grown for 24 h on 12-mm coverslips and treated according to experimental procedure in the presence of 0.5 mg/ml Dextran-488 (10,000 MW, Thermo Fisher Scientific). Cells were fixed with 4% paraformaldehyde for 30 min, rinsed three times in PBS, and mounted on glass microscopic slides with ProLong Diamond Antifade Mountant (Thermo Fisher Scientific).
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5

Quantifying Exocytosis in MDA-MB-231 Cells

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To quantify exocytosis, 1 × 104 MDA-MB-231 cells were seeded into 96-well culture plates after 24 h of IR treatment. Cells were treated with Alexa Fluor 488-conjugated dextran at 10,000 MW (Dextran-488, Thermo Fisher Scientific) for 3 h. After washing three times with PBS, 100 μl of culture medium was added to each well. After incubation for 8 h, the culture medium was collected and moved to a new 96-well culture plate. The fluorescence intensity of Dextran-488 in the conditioned medium was measured using a microplate reader (CLARIOstar, BMG Labtech, Ortenberg, Germany). Data were collected from three independent experiments in triplicate and normalized against the control group.
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