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6 protocols using ripa extraction reagent

1

WWOX Protein Expression Analysis via Western Blot

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The detection of WWOX protein expression in the cell lines was carried by the use of Western blot. Briefly, total protein was extracted and separated in 10% SDS‐PAGE, and then transferred to PVDF membranes. The lysis buffer was RIPA extraction reagent (Pierce Biotechnology, Rockford, IL, USA. Cat No#89900), containing phenylmethylsulfonyl fluoride. In addition, we loaded 20 μg of total protein per well for blotting. Pore size of the PVDF membrane was 0.45 μm (Immobion‐P Transfer Membrane, Millipore, Billerica, MA, USA. Cat No# IPVH 00010). The membranes were then washed, blocked with 5% nonfat dry milk, and followed by incubation with specific primary antihuman antibodies against WWOX (1:1000; Abcam, Cambridge, UK. Cat No# ab189410), GAPDH (1:1000; Sigma‐Aldrich, USA. Cat No# G9295) at 4°C overnight, and secondary appropriate antibody (Peroxidase‐conjugated AffiniPure Goat Anti‐Rabbit/Mouse IgG (H+L), 1:5000; Jackson ImmunoResearch, USA. Cat No#111‐035‐003; 115‐035‐003) for 1 hour at room temperature on the next day. Enhanced chemiluminescence assay (Pierce Biotechnology, Rockfield, IL, USA. Cat No#32209) was used to visualize the bands, and the blotted protein bands were exposed to Tanon‐5200 Chemiluminescent Imaging System (Tanon, China). Protein levels were quantified by ImageJ software.
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2

Immunoblotting Protein Detection Protocol

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Immunoblotting was performed as described previously.40 (link) In brief, protein was isolated from 70 to 80% confluent cultured cells using RIPA Extraction Reagent (Pierce Biotechnology, Rockfield, IL, USA) following the manufacturer's directions. Equal amounts of protein were resolved on 4–20% SDS polyacrylamide gels and transferred to nitrocellulose membrane. The resulting blots were blocked with 5% non-fat dry milk and probed with antibodies. All antibodies were obtained from Cell Signalling Technology Inc. Denver, MA, USA except RUNX2 and GAPDH which were purchased from Santa Cruz Biotech. Blots were visualized using Western blotting luminal reagent (sc-2048; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA).
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3

Western Blot Analysis of PTEN-AKT Signaling

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Cells were lysed with RIPA extraction reagent (Thermo Fisher Scientific, MA, USA) to obtain total protein. Total protein samples (40 μg) were separated by SDS‐PAGE and transferred to polyvinylidene difluoride (PVDF) membranes (Millipore, Billerica, MA). Then, the PVDF membranes were incubated with primary antibodies against PTEN, total AKT, phosphorylated AKT (p‐AKT) and GAPDH (Cell Signaling Technology, Danvers, MA, USA). Bands were visualized by detection with the ECL substrate.
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4

Exosome Protein Extraction and Western Blot Analysis

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Total exosome protein was extracted with RIPA extraction reagent (Thermo Fisher, USA) supplemented with a protease inhibitor cocktail (Roche, USA) at a ratio of 100:1. Protein concentration was determined by BCA protein assay kit (Thermo Fisher, USA). Equal amounts of proteins (approximately 30 μg) were subjected to 10% SDS‐PAGE and then transferred onto a polyvinylidene fluoride (PVDF) membrane (GE Healthcare, Piscataway, NJ, USA). The membrane was blocked with 5% non‐fat milk in TBST buffer and incubated with the primary antibodies against CD9 (1:1000, 13174S; CST) and TSG101 (1:1000, Ab83; Abcam) overnight at 4°C. Subsequently, the blot was washed with TBST, followed by incubation with HRP‐conjugated goat antimouse or goat anti‐rabbit secondary antibody (1:5000; Santa Cruz Biotechnology) at room temperature for 1 hour. The immunoreactive bands were visualized with Immobilon Western Chemiluminescent HRP Substrate (Millipore).
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5

Exosome Isolation and Characterization

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Serum isolated from coagulation promoting vacuum tubes within 2 h was immediately transferred to a 1.5 ml Eppendorf tube and immediately centrifuged at 1500 g for 5 min and then 13800 g for 5 min at 4°C to eliminate cell sediments. ExoQuick™ solution (EXOQ5A-1; SBI System Biosciences, United States) was mixed evenly with supernatant according to the manufacturer's instructions. Subsequently, incubate at 4°C for 30 min, followed by centrifuged twice at 4°C (1500 g, 30 min and 1500 g, 5 min), supernatants were discarded, and the exosome pellets were resuspended in 250 μL PBS and stored at −80°C for further analysis.
The morphology of isolated exosomes was imaged using the transmission electron microscopy (TEM; G2 spititi FEI; Tecnai). And the size distribution and concentration of exosomes were quantified by ZETASIZER Nano series-Nano-ZS instrument (Malvern, United Kingdom). Total exosome protein was extracted with RIPA extraction reagent (Thermo Fisher, United States) according to manufacturer’s instructions. Western blotting analysis (WB) were performed to detect the exosomal surface markers: CD9, CD63, and TSG101.
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6

Western Blot Analysis of Protein Expression

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Total protein was lysed with RIPA extraction reagent (ThermoFisher, USA) that contained with a protease inhibitor cocktail (Beyotime Biotechnology, China). Protein lysates were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDSP-AGE) and transferred to 0.22 mm polyvinylidene fluoride membranes (Millipore, USA). The membranes were subsequently blocked in 5% defatted milk and incubated with primary antibodies overnight at 4 °C. Specific bands were visualized by ECL chromogenic substrate and quantified by densitometry (Quantity One software, BioRad). The following antibodies were used: HPSE2 (1:500; #ab127204, abcam, Cambridge, UK), p53 (1:1000; #2527, Cell Signaling Technology, Inc., MA, USA), p21 (1:1000; #2947, Cell Signaling Technology, Inc., MA, USA), GAPDH (1:1000; #5174, Cell Signaling Technology, Inc., MA, USA), and ki67 (1:1000; #ab15580, abcam, Cambridge, UK).
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