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6 protocols using anti foxp3 alexa fluor 488

1

Regulatory T Cell Phenotyping by Flow Cytometry

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Freshly isolated splenocytes were stained with PE-Cy5 anti-CD4 and PE-anti-CD25 or isotypes rat IgG2a,κ and rat IgM,κ, respectively, for 10 min at 4 °C (BD). Cells were then fixed and permeabilized using the Mouse FoxP3 Buffer Set and then incubated with Alexa Fluor 488 anti-FoxP3 or isotype rat IgG2baccording to manufacturer’s instructions (BD). Flow cytometry was performed immediately or within 24 h of permeabilization using a FACScaliber machine. 1 × 105 gated events were recorded. Results were analyzed with FCS Express software.
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2

Murine Regulatory T Cell Phenotyping

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Freshly isolated splenocytes were stained with PE-Cy5 anti-CD4 and PE anti-CD25 or isotypes rat IgG2a,κ and rat IgM,κ, respectively, for 10 min at 4°C (BD). Cells were then fixed and permeabilized using the Mouse FoxP3 Buffer Set, then incubated with Alexa Fluor 488 anti-FoxP3 or isotype rat IgG2baccording to manufacturer’s instructions (BD). Flow cytometry was performed immediately or within 24 h of permeabilization using a FACScaliber machine. 1 × 105 gated events were recorded. Results were analyzed with FCS Express software.
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3

Phenotypic Analysis of Immune Cells

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Fresh PBMCs from patients and healthy donors were washed and stained with the following antibodies at 4 °C for 15 min: anti-CD3-V450 (#560366, BD Biosciences), anti-CD4-V500 (#560769, BD Biosciences), anti-CD45RA-PE-Cy7 (#560675, BD Biosciences), anti-CXCR5-APC (#356907, BioLegend), and anti-PD-1-PE-Cy7 (#561272, BD Biosciences). For intracellular staining of anti-Foxp3-Alexa Fluor 488 (#560047, BD Biosciences), the cells were fixed and permeabilized with Transcription Factor Buffer at 4 °C for 30 min and were washed with Perm/Wash Buffer (BD Biosciences) before intracellular staining. Isotype-matched control antibodies were used to monitor the background. The well-stained cells were subjected to flow cytometry using a BD FACSLyric system and were further analyzed using the FlowJo v10 software (TOMY Digital Biology).
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4

Multiparametric Flow Cytometry Analysis

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For surface staining, cells were stained with anti-CD3 PerCP-Cy5.5, anti-CD4 APC, anti-CD25 APC-Cy7, anti-CD69 Pe-Cy7, anti-PD-1 BV421, and anti-CD38 Alexa Fluor 488 (all from BD Biosciences, San Diego, CA, USA). Cells were then incubated for 15 minutes under room temperature and were fixed with 1% formaldehyde for 15 minutes. For intracellular staining, cells were permeabilized (Cytofix/Cytoperm TM Fixation/Permeabilization Solution Kit, BD Biosciences) for 40 minutes and stained with anti-FoxP3 Alexa Fluor 488, anti-CTLA-4 BV605, and anti-IL-10 APC. All the samples were analyzed using an LSRFortessa flow cytometer (Becton-Dickinson, San Jose, CA, USA) and analyzed by FlowJo software (FlowJo, Tree Star, Ashland, OR, USA).
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5

Multicolor Flow Cytometry of PBMCs

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Fresh PBMCs from patients and healthy donors were washed and stained with the following antibodies at 4 ºC for 15 min: anti-CD3-V450 (#560366, BD Biosciences), anti-CD4-V500 (#560769, BD Biosciences), anti-CD45RA-PE-Cy7 (#560675, BD Biosciences), anti-CXCR5-APC (#356907, BioLegend), and anti-PD-1-PE-Cy7 (#561272, BD Biosciences). For intracellular staining of anti-Foxp3-Alexa Fluor 488 (#560047, BD Biosciences), the cells were xed and permeabilized with Transcription Factor Buffer at 4 °C for 30 min, and were washed with Perm/Wash Buffer (BD Biosciences) before intracellular staining. Isotype-matched control antibodies were used to monitor the background. The well-stained cells were subjected to ow cytometry using a BD FACSLyric system, and were further analyzed using the FlowJo v10 software (TOMY Digital Biology).
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6

Multiparameter Flow Cytometry Analysis

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Cell suspensions were analysed using BD LSRII research flowcytometry, after staining with combinations of the following antibodies and their isotype controls: Anti-CD4-APC-CY7 (BD Pharmingen, USA), anti CD25-Alexa Fluor 700 (BD Pharmingen, USA), anti CCR4-PE-CY7 (BD Pharmingen, USA), anti CCR6-Alexa Fluor 647 (BioLegend), anti CD127-Alexa Fluor 647 (BD Pharmingen, USA), anti FoxP3-Alexa Fluor 488 (BD Pharmingen, USA), anti GATA-3-Alexa Fluor 647 (BD Pharmingen, USA), and anti Tbet-PE (Santa Cruz). For intracellular staining, cells were fixed and permeabilised using the cytofix/Cytoperm kit (BD Biosciences, USA) as per manufacturer's protocol. Data were analysed using FlowJo ® version 7.6 (Tree Star Inc., USA). Lymphocyte population was selected then identification of pure CD4 + proportion of T cells was gated on isotype control. The cell populations were calculated as percentages of CD4 + T cells to the whole lymphocytic count and presented as mean  SD. Identification of different T cell subsets and gating is shown in Figure S6, S7, S8 and S9.
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