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1 1 dioctadecyl 3 3 3 3 tetramethylindocarbocyanine perchlorate dii dye

Manufactured by Merck Group
Sourced in United States, Japan

1,1′-dioctadecyl-3,3,3′,3′-tetramethylindocarbocyanine perchlorate (DiI) dye is a fluorescent lipophilic tracer commonly used for cell labeling and membrane staining in biological research. It has an absorption maximum at 549 nm and an emission maximum at 565 nm.

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3 protocols using 1 1 dioctadecyl 3 3 3 3 tetramethylindocarbocyanine perchlorate dii dye

1

Synthesis and Characterization of TIPP Analogues

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TIPP (AEWCP, purity ≥ 99%, molecular weight 604.68 Da), IS (S4: AEWSP, purity ≥ 99%, molecular weight 588.61 Da), and FITC-TIPP (5-FITC-(Ahx)-AEWCP (Figure 1c), purity ≥ 96%, molecular weight 1107.19 Da) were synthesized by QIANGYAO Biological Technology Company (Wuhan, China). ACN, FA, DCM, isopropanol (IPA), and MeOH, of LC-MS grade, were from Merck Darmstadt, Germany. DTT, L-AA, PMSF, monoclonal anti-dinitrophenyl antibody produced in mouse, IgE isotype, clone SPE-7 (anti-DNP-IgE), dinitrophenyl-human serum albumin (DNP-HSA), 1,4-piperazinebis (ethanesulfonic acid) (PIPES), p-nitrophenyl-N-acetyl-β-D-glucosaminide (p-NAG), 1,1′-dioctadecyl-3,3,3′,3′-tetramethylindocarbocyanine perchlorate (DiI) dye, and Hoechst 33342 were purchased from Sigma-Aldrich (St. Louis, MO, USA). Minimum Essential Medium (MEM) and fetal bovine serum (FBS) were obtained from Gibco (Waltham, MA, USA). TDW was obtained from Milli-Q PLUS PF water purifying system (Millipore, Bedford, MA, USA). Rat IL-4 and histamine ELISA detection kits were produced by Elabscience Biotechnology Company (Wuhan, China).
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2

Cellular Uptake of pDNA-GVs in HEK293 and C6 Cells

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HEK293 or C6 cells were incubated with pDNA-GVs (pDNA-GVs@ HEK293 cells or pDNA-GVs@ C6 cells) for 2, 4, or 6 h at 37 °C, and free pDNA-GVs was removed via PBS rinse. To evaluate the cellular uptake efficiency of pDNA-GVs, 1,1’-dioctadecyl-3,3,3’,3’-tetramethylindocarbocyanine perchlorate (Dii) dye (Sigma-Aldrich)-labeled pDNA-GVs were incubated with HEK293 or C6 cells, and DAPI (Sigma-Aldrich) was used to stain the pDNA-GVs@HEK293 cells or pDNA-GVs@C6 cells, followed by assay with a confocal microscope (A1, Nikon, Japan) and flow cytometry (CytoFLEX LX, Beckman, USA). TEM was used to examine the morphology and subcellular localization of pDNA-GVs in HEK293 and C6 cells (HT7700, HITACHI, England). To locate pDNA-GVs in lysosomes, pDNA was labeled with N,N’-(dipropyl)-tetramethyl indocarbocyanine (Cy3) using Label IT Nucleic Acid Labeling Kit (Mirus) and following supplier’s protocol. The fluorescent labeling pDNA/PEI25 k or pDNA-GVs complexes were used to incubate with HEK293 cells or C6 cells for 6 h. After that, the cells were washed with PBS, and stained with LysoTracker Green (Thermo Fisher) for lysosome and DAPI (Sigma-Aldrich) for nuclei. Finally, the cells were observed under a confocal microscope (A1, Nikon, Japan).
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3

Phage Display Peptide Library Protocol

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The Ph.D. -12TM phage display peptide library kit containing E. coli host strain ER2738 and M13KE control phage (New England BioLabs, Ipswich, MA) was used. The phage display library contained random peptides constructed at the N-terminus of the coat protein (pIII) of M13 phage. The titer of the library was 0.5 to 2 × 1013 plaque-forming unit. Horseradish peroxidase/anti-M13 monoclonal conjugate antibody (Abcam, Cambridge, UK) was used. Fetal bovine serum and trypsin were obtained from Thermo Fisher Scientific (Waltham, MA). The DNA sequencing primer was synthesized at Cosmogenetech (Seoul, Korea). Bacto-tryptone, bacto-yeast extract, and NaCl were obtained from Sigma-Aldrich (St. Louis, MO). 1, 2-Dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) was purchased from Echelon Biosciences (Salt Lake City, UT). 1,2-Distearoyl-sn-glycero-3-phosphoethanolamine-N-methoxy(polyethylene glycol)(DSPE-mPEG) (molecular weight, 3000) was purchased from Nanosoft Polymers (Winston-Salem, NC). 7-Ethyl-10-hydroxycamptothecin (SN38) was purchased from Carbosynth (San Diego, CA). Hematoporphyrin (HPP), soybean oil, and 1,1′-dioctadecyl-3,3,3′,3′-tetramethyl indocarbo cyanine perchlorate (DiI dye) were purchased from Sigma-Aldrich (St. Louis, MO).
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