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10 protocols using β actin

1

Protein Extraction and Western Blot Analysis

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Total cell proteins were prepared using IP lysate (P0013, Beyotime, China) mixed with protease and phosphatase inhibitors (HY-K0010 and HY-K0023, MCE, China). Cell lysates were centrifugated at 4℃ and their concentrations were determined using a BCA Protein Assay Kit (Pierce Biotechnology, USA). Next, the samples were subjected to separation through electrophoresis with 10–12% Tris SDS-PAGE gels and transferred to PVDF membranes. The membranes were incubated with 5% skimmed milk at room temperature and primary antibodies at 4℃ overnight. Next, secondary horseradish peroxidase (HRP) antibodies were applied at room temperature. Finally, proteins were visualized using ECL (WB012, Share-Bio, Shanghai) detection regent and a Bio-Rad system. The antibodies used were directed against GFRA1 (ab84106, Abcam, 1:1000), GDNF (ab18956, Abcam, 1:1000), RET (14,556, Cell Signaling Technology, 1:1000), β-actin (30101ES50, Yeasen, China, 1:5000), mTOR (2983, CST, 1:1000), p-mTOR (5536, CST, 1:1000), S6K (2708, CST, 1:1000), p-S6K (9204, CST, 1:1000), BECN1 (3495, CST, 1:1000), LC3 (12,741, CST, 1:1000), P62 (8025, CST, 1:1000), cleaved caspase-3 (9661, CST, 1:1000) and its corresponding HRP-conjugated antibodies (anti-mouse, 115–035-003 and anti-rabbit, 111–035-003, Jackson ImmunoResearch, 1:10,000 for both).
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2

P. multocida Induced Macrophage Responses

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The pathogenic strain C48-1 (A:1) of P. multocida was isolated from chicken with fowl cholera in Jiangsu, China, in 1953 and was stored at our laboratory. The murine peritoneal exudate macrophages were isolated from C57BL/6N mice. The DF-1 and HD11 cells were provided by our laboratory. The antibodies used were as follows: antibodies against ERK1/2, p38, JNK, p65, p-ERK1/2, p-p38, p-JNK, and p-p65 (Cell Signaling Technology, USA); procaspase-1 and IL-1β (Abcam, England); GSDMD or GSDMD(-N), ASC, and caspase-1 p20 (Affinity, USA); NLRP3 (Proteintech, China); TLR1, TLR2, and TLR4 and IgG isotype-matched control antibodies (Proteintech, China); and β-actin (Yeasen, China). The NF-κB (BAY11-7082), JNK (SP600125), p38MAPK (SB203580), and ERK (U0126) inhibitors were purchased from Sigma-Aldrich (USA). The IRDye 800CW-conjugated anti-rabbit IgG or anti-mouse IgG antibodies were purchased from Li-Cor Biotechnology (USA). In this study, 5- to 8-week-old C57BL/6N mice were purchased from Liaoning Changsheng Biotechnology (Liaoning, China), and SPF chicken serum was provided by the National Engineering Research Center of Veterinary Biologics Corp. (Harbin, China).
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3

Western Blot Analysis of Cellular Proteins

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Cells were washed and lysed with RIPA buffer (WB3100, NCM, China) containing protease inhibitors cocktail (B14001, bimake) on ice for 10 min. Then, protein lysate followed centrifugation in 4 °C for 10 min and the supernatant was collected. Protein supernatant were prepared with 5 × SDS loading buffer (P1040, Solarbio) and denatured at 100 °C for 5 min. Appropriate protein of samples were separated by 4–20% Genshare PAGE gel electrophoresis and electroblotted into NC membranes on eBlot™ L1 Protein Transfer System (GenScript). The membranes were incubated in 5% non-fat powdered milk (Cat No. 36101; Yeasen, Shanghai, China) in TBST (TBS with 0.1% Tween20) for 1 h at room temperature, followed by incubation with primary antibodies against specific proteins overnight: β-actin (1:5,000, Yeasen, 30101ES50), HSP90 (1:1000, 13171-1-AP, Proteintech), and OPA1(1:1000, Abcam, ab42364). The primary antibodies were diluted in universal antibody diluent (WB500D, NCM, China). The membranes were washed thrice of 10 min each time and incubated with the HPR-conjugated goat anti-mouse (1:10,000, Jackson ImmunoResearch, 115-035-003) or rabbit secondary antibodies (1:10,000 Jackson ImmunoResearch, 111-035-003) for 1 h at room temperature. Enhanced chemiluminiscence (ECL) was performed using the ECL kit (WB012, share-bio, China), visualized by the Bio-Rad system.
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4

Western Blot Analysis of Protein Expression

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Cells were washed and lysed with RIPA buffer (NCM, WB3100) containing protease inhibitor cocktail (Bimake, B14001) on ice for 10 min. Then, protein lysate followed centrifugation in 4°C for 10 min and the supernatant was collected. Protein supernatants were prepared with 5× SDS loading buffer (Solarbio, P1040) and denatured at 100°C for 5 min. Appropriate protein samples were separated by 4-20% Genshare PAGE gel electrophoresis and electroblotted onto NC membranes using eBlot™ L1 Protein Transfer System (GenScript). The membranes were incubated in 5% nonfat powdered milk (Aangon Biotech, F704BA0001) in TBST (TBS with 0.1% Tween 20) for 1 hour at room temperature, followed by incubation with primary antibodies against specific proteins overnight: β-actin (Yeasen, 30101ES50), KPNA2(Abcam, ab84440), and p-STAT3(CST, 9145S). The primary antibodies were diluted in universal antibody diluent (WB500D, NCM). The membranes were washed thrice of 10 min each time and incubated with HPR-conjugated goat anti-mouse (Jackson ImmunoResearch, 115-035-003) or rabbit secondary antibodies (Jackson ImmunoResearch, 111-035-003) for 1 hour at room temperature.
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5

Western Blot Analysis of Protein Expression

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Tissues or cells were lysed on ice with precooled lysis buffer for 30 min and centrifuged at 12 000 rpm for 10 min at 4 ℃. The supernatant was transferred to centrifuge tubes, and 5 × SDS loading buffer was added. Samples were denatured for 10 min at 99 ℃ and subjected to sodium dodecyl sulfate‐polyacrylamide gel electrophoresis and transferred onto a polyvinylidene fluoride membrane (Merck). The membrane was blocked with 5% BSA for 60 min at room temperature and incubated with the primary antibodies against Serpine1 (1:1000; Abcam), Nr4a1 (1:1000, Abcam), β-actin (1:1500, Yeasen), Gapdh (1:1500, Yeasen), and transferrin (1:1000, Beyotime) overnight at 4 ℃. After washing three times with 1 × TBST, the membrane was probed with the HRP-linked goat anti-rabbit secondary antibody (1:1000, Yeasen) for 60 min at room temperature and washed with 1 × TBST buffer. Proteins were visualized using electrogenerated chemiluminescence reagents (Epizyme) and detected with an ImageQuant LAS 4000 chemiluminescent Image Analyzer (General Electric). The relative densitometric density of the target band to the internal reference band was analysed using the ImageJ software.
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6

Quantification of HIF1α and FUT7 Proteins

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Tissues or cells were lysed in RIPA buffer containing protease inhibitors (cat. no. R0010; Beijing Solarbio Science & Technology Co., Ltd.), and then centrifuged at 4°C for 15 min at 12,000 × g. Total protein concentration was quantified using NanoDrop 2000 Spectrophotometer (Thermo Fisher Scientific, Inc.), separated by SDS-PAGE on 10% gels and transferred to polyvinylidene difluoride membranes (MilliporeSigma). The membranes were then incubated with 5% fat-free milk at 37°C for 1 h, and at 4°C overnight with the following primary antibodies: Anti-HIF1α (cat. no. ab1; mouse; Abcam; 1:500 dilution), anti-FUT7 (cat. no. MAB64091; mouse; R&D Systems, Inc.; 1:1,000 dilution) and anti-β-actin (cat. no. GB12001; mouse; Wuhan Servicebio Technology Co., Ltd.; 1:1,000 dilution). The membranes were washed three times with Tris-buffered saline containing 0.1% Tween-20 for 10 min, and then incubated with horseradish peroxidase (HRP)-conjugated goat anti-mouse IgG (cat. no. 5450-0011; SeraCare Life Sciences, Inc.; 1:5,000 dilution) for 1 h at room temperature. The protein bands were visualized with ECL western blot detecting reagent (cat. no. 36208ES60; Shanghai Yeasen Biotechnology Co., Ltd.) and semi-quantified using ImageJ v1.8.0 software with β-actin as an internal reference to analyze the expression of each protein.
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7

Western Blot Analysis of P2RX1 Protein

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Cell lysates were prepared by using RIPA lysis and extraction buffer (Sigma). After total protein normalized, protein samples were separated by 8–10% SDS-PAGE gel electrophoresis and transferred onto 0.22 μm NC membranes. After blocking with 5% skimmed milk or 3% BSA diluted in Tris buffer saline plus 0.1% Tween 20 (TBST) for 1 h at room temperature, membranes were incubated overnight with P2RX1 primary antibody (Alomone, 1:200) or β-actin (Yeasen, 1:5000), and 2 h with secondary antibody (Jackson ImmunoResearch, 1:10,000). Enhanced chemiluminescence (ECL) was performed using ECL kit (share-bio, WB012), visualized by the Bio-Rad system.
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8

Protein Extraction and Immunoblotting

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Total protein was extracted using a routine procedure and blotted with the following primary antibodies: LAIR-1 (sc-398141; Santa Cruz Biotechnology), phospho-Foxo1 (Ser256) (84192; Cell Signaling Technology, Danvers, MA, USA), Foxo1 (2880; Cell Signaling Technology), phospho-Akt (Ser473) (AF8355; Affinity Biosciences, Cincinnati, OH, USA), Akt (9272; Cell Signaling Technology), proliferating cell nuclear antigen (PCNA; BM0104; Boster Biotech Co., Ltd., Wuhan, China), Twist1 (ab50581; Abcam, Cambridge, UK), Glut1 (NB110-39113, Novus Biologicals, Littleton, CO, USA), and β-actin (30101ES50; Yeasen Biotech Co., Ltd., Shanghai, China).
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9

Protein Analysis in Human Placenta and Cell Cultures

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Radioimmunoprecipitation assay lysis buffer (Ther- mo Fisher Scientific) was used to obtain protein extracts from human placentas and cell cultures. The concentration of the obtained protein sample was measured with a BCA protein determination kit (Thermo Fisher Scientific). The protein samples were separated by SDS-PAGE and then transferred to PVDF membranes. Five percent skimmed milk was used to block the membranes at room temperature for 1 hour, and then the membranes were incubated with antibodies (BST2 and MMP2 (Abcam, UK), GAPDH, β-actin and β-tubulin (Yeasen, China) at 4°C overnight. Corresponding horseradish peroxidase-conjugated secondary antibodies were added for incubation at room temperature for 1 hour. The color was developed by chemiluminescence (Bio-Rad, Germany), and the imaging results were analyzed with a gel imaging system [25 (link)].
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10

Protein Blotting with Multiple Antibodies

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Total protein was prepared using a routine procedure and blotted with following primary antibodies: LAIR-1 (sc-398141; Santa Cruz Biotechnology), phospho-FoxO1 (Ser256) (84192; Cell Signaling Technology, Danvers, MA, USA), FoxO1 (2880; Cell Signaling Technology), phospho-Akt (Ser473) (AF8355; A nity Biosciences, Cincinnati, OH, USA), Akt (9272; Cell Signaling Technology), proliferating cell nuclear antigen (PCNA; BM0104; Boster Biotech Co., Ltd., Wuhan, China), Twist1 (ab50581; Abcam, Cambridge, UK), Glut1 (NB110-39113, Novus Biologicals, Littleton, CO, USA), and β-actin (30101ES50; Yeasen Biotech Co., Ltd., Shanghai, China).
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