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109 protocols using sb216763

1

Manipulating Wnt/β-catenin Signaling in Bladder Cancer

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The DLX-6AS1 overexpressing vector (pcDNA3.1-DLX6-AS1) and the control vector (pcDNA3.1) were purchased from Genescript company (Nanjing, China). The siRNAs for DLX6-AS1 (DLX6-AS1 siRNA#1 and #2) and the control scrambled siRNA as a negative control were purchased from Ribobio company (Guangzhou, China). The chemical reagents including XAV939 (Wnt/β-catenin pathway inhibitor), lithium chloride (LiCl; Wnt/β-catenin activator) and SB-216763 (Wnt/β-catenin activator) were both purchased from Sigma, and the bladder cancer cells were pre-treated with XAV939 (10 μM), LiCl (20 mM) or SB216763 (30 µM) for 24 h before further transfection studies. For the cell transfection studies, cells were transfected with the corresponding plasmids and siRNAs using the Lipofectamine 2000 reagent (Invitrogen, Carlsbad, USA) by following the manufacturer’s instructions. At 24 h after transfections, cells were prepared for further in vitro assays.
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2

GSK3α/β Inhibition Using SB 216763

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The specific GSK3α/β inhibitor SB 216763 (10 and 30 µM, Sigma-Aldrich St. Louis, MO, USA) is a structurally distinct maleimide which inhibits GSK3α in vitro in an ATP-competitive manner with an IC50 value of 34 nM. It also inhibits GSK3β with a similar potency. The selectivity for GSK3α/β was established by testing SB 216763 against a panel of 24 protein kinases, including PKB and 3-phosphoinositide dependent protein kinase-1 (PDK-1) Dimethylsulfoxid (DMSO) (Sigma-Aldrich, St. Louis, MO, USA) was used as vehicle control in all experiments.
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3

Cytotoxicity Assay of Small Molecules

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5 × 103 cells/well (A2780 and A2780cis) were seeded in 96-well plates overnight and afterwards incubated with different concentrations of SB216763 (12.5 µM, 25 µM, 50 µM, 100 µM) (Sigma-Aldrich, Taufkirchen, Germany), XAV939 (6.25 µM, 12.5 µM, 25 µM, 50 µM) (Sigma-Aldrich) and triptolide (6.25 nM, 12.5 nM, 25 nM, 50 nM) (Sigma-Aldrich).
S-phase-dependent synthesis of DNA during the cell cycle and, therefore, cellular proliferation was analyzed with thymidine analog 5-bromo-2′-deoxyuridine (BrdU) enzyme-linked immunosorbent assay (ELISA) after 72 h. Cell viability was determined using a 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) (Sigma-Aldrich) colorimetric assay after 48 h and 72 h. The procedures of both techniques were already reported by our colleagues (Geiger et al. 2016 (link); Zhu et al. 2018 ).
Controls of untreated cells (for incubation with triptolide), cells treated with 2‰ (for incubation with SB216763) and 5‰ (for incubation with XAV939) dimethyl sulfoxide (DMSO) were carried out. For the evaluation the control without DMSO was set 100%.
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4

Assessing NDRG1 Phosphorylation by GSK3β

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Glycogen synthase kinase 3-beta (GSK3b) kinase inhibitor (SB216763) was purchased from Sigma-Aldrich. To determine the phosphorylation status of NDRG1, immunoprecipitation was used to pull down the NDRG1 protein, followed by an in vitro phosphorylation assay, similarly as previously described [57 (link),58 (link),59 (link)]. Briefly, Protein A/G PLUS-agarose beads (Santa Cruz Biotechnology, Dallas, TX, USA) with an anti-GFP antibody were used to precipitate NDRG1 proteins. After elution of the immunoprecipitated complex, the protein solution was subjected to an in vitro kinase assay by incubation with recombinant GSK3b protein (Sigma-Aldrich, St. Louis, MO, USA) in a solution containing ATP. Phosphorylated proteins were subjected to SDS-PAGE analysis, and the phosphorylation status of NDRG1 was determined by hybridization with an anti-phosphoserine antibody (Abcam, Cambridge, UK). Alternatively, NDRG1-FL- or NDRG1-Dc-transfected cells were treated with GSK3b-specific inhibitor (SB21673) at various doses for 24 h. Cellular proteins were extracted and subjected to a pulldown assay with an anti-GFP antibody. The phosphorylation status of NDRG1 was revealed by phospho-serine-specific immunoblotting.
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5

Cell Culture and Transfection Protocols

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Human embryonic kidney 293 T with SV40 T antigen (HEK293T) cells were grown in Dulbecco’s modified Eagle’s medium (DMEM) (Sigma-Aldrich, Madrid, Spain) supplemented with 10% fetal bovine serum (Invitrogen, CA, USA) and 80 µg/ml gentamycin (Gibco, MA, USA). Human neuroblastoma cells (SH-SY5Y) were cultured in RPMI supplemented with 10% fetal bovine serum (Invitrogen) and 80 µg/ml gentamicin. The SH-SY5Y-α-SYN Tet-Off cells, described previously [37 (link), 38 (link)], were cultured in RPMI with 10% fetal bovine serum, 250 µg/ml G418 (Gibco), 50 µg/ml hygromycin B (Invitrogen), and 2 µg/ml doxycycline (DOX) (Sigma-Aldrich). The expression of α-SYN was switched on by DOX removal. Transient transfection of HEK293T cells was performed with TransFectin Lipid Reagent (Bio-RAD, CA, USA). The inhibitors SB216763, LY294002, and MG132 were from Sigma-Aldrich. Cycloheximide (CHX) was from Boehringer Mannheim (Stuttgart, Germany).
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6

PM2.5 Exposure in Human Bronchial Cells

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The 16HBE human bronchial epithelial cell line was obtained from Guangzhou Medical University (Guangzhou, China), an agent of ATCC. The 16HBECs were treated with DMEM (Sigma–Aldrich, Louis, USA) supplemented with 10% FBS and 1% penicillin (Sigma–Aldrich, Louis, USA), and then, the cells were pretreated with TDZD-8, SB216763 or SP600125 (Sigma–Aldrich, Louis, USA) for 30 mins and treated with different concentrations of PM2.5 (5–20 μg/mL).
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7

Investigating Inflammatory Responses In Vitro

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Cell culture media, Dulbecco’s Modified Eagle medium (DMEM) was purchased from Gibco Inc. (NY, USA). LPS (Escherichia coli 055:B5) and 3-(4,5-dimethylthiazol-2-yl)-2.5-diphenyltetrazolium bromide (MTT) were purchased from Sigma–Aldrich (St. Louis, MO, USA). SB203580, PD98059 were purchased from Calbiochem (San Diego, CA). SB216763 and N-Acetyl Cysteine (NAC) were purchased from Sigma–Aldrich. Antibodies against iNOS, ATF3 and cyclin D1 were purchased from Santa Cruz Biotechnology, Inc (Santa Cruz, CA, USA). Other antibodies against IκB-a, p65, ERK1/2, phospho-ERK1/2 (Thr202/Tyr204) and b-actin were purchased from Cell Signaling (Bervely, MA, USA). All chemicals were purchased from Sigma-Aldrich, unless otherwise specified.
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8

Cell Culture and Transfection Protocols

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SH-SY5Y cells, mouse neuroblastoma (N2a) cells were cultured in Dulbecco's modified Eagle's medium (DMEM; Gibco, Grand Island, NY, USA) F12 or DMEM containing 10% fetal bovine serum (Gibco) with penicillin (100 mg/ml) and streptomycin (100 mg/ml). Transfections were performed using Lipofectamine 2000 reagent (Invitrogen, La Jolla, CA, USA) according to the manufacturer's instructions. The cells were lysated and subjected to western blotting analysis 48 h after transfection. For the SB216763 treatment (Sigma-Aldrich, St. Louis, MO, USA), cells were treated with 5 mM SB216763, and after 24 h incubation, cell lysates were subjected to western blotting analysis.
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9

Investigating Signaling Pathways in Cellular Processes

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The AKT inhibitor LY294002, GSK3β inhibitor SB216763, NFκB inhibitor Bay 11–7082, FITC-dextran, and Evans blue were purchased from Sigma (Sigma-Aldrich, St. Louis, MO, United States). JNK agonist anisomycin was purchased from Beyotime (Beyotime Biotechnology, Shanghai, China). TNF-α was obtained from R&D Systems (Minneapolis, MN, United States). The following primary antibodies were applied in this study: anti-p-GSK3β, anti-GSK3β, anti-p-JNK, anti-JNK, anti-p-NFκB and anti-NFκB antibodies purchased from Cell Signaling Technology (Danvers, MA, United States); anti-FGF20, anti-VE-cadherin, anti-Claudin-5, and anti-GFAP antibodies obtained from Abcam (Cambridge, MA, United States); and anti-p-AKT, anti-AKT and anti-Occludin antibodies purchased from Invitrogen (Carlsbad, CA, United States) and Santa Cruz Biotechnology (Dallas, TX, United States), respectively. The secondary antibodies used in this study were goat anti-rabbit immunoglobulin G (IgG) H&L (HRP) and goat anti-mouse IgG-HRP purchased from Abcam (Cambridge, MA, United States) and Santa Cruz Biotechnology (Dallas, TX, United States), respectively.
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10

Characterization of Immortalized Kidney Cell Lines

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Immortalized embryonic kidney cell lines, 293T/17 and HEK293, were purchased from American Type Culture Collection, ATCC (Manassas, VA, USA). The U937, U937-Mock, and U937-NDRG2 cell lines [26 (link)] were cultured in Roswell Park Memorial Institute (RPMI) -1640 medium containing 10% fetal bovine serum (FBS) (ATCC, Manassas, VA, USA), HEPES (Lonza, Basel, Swiss), β-mercaptoethanol (Sigma-Aldrich, St. Louis, MO, USA), and penicillin and streptomycin (Lonza, Basel, Swiss). The 293T/17 and HEK293 cells were cultured in Dulbecco’s modified Eagle’s medium containing 10% FBS, penicillin, and streptomycin at 37 °C in 5% CO2. In some experiments, the cells were treated with chemicals As2O3, MG132, 2’,7’-dichlorofluorescin diacetate (DCFH-DA), okadaic acid, SB216763 (Sigma-Aldrich, MO, USA), and z-VAD-fmk (ENZO, Seoul, Korea). The shMcl-1 clones (TRCN0000005514 and TRCN0000005516) were purchased from Sigma-Aldrich.
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