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4 protocols using rabbit anti lc3 antibody

1

Immunofluorescence Staining of Autophagy Markers

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For in vitro experiments, after treatment, HepG2 cells were fixed using 4% paraformaldehyde in PBS for 20 min at room temperature, washed twice in PBS, and blocked for 45 min at room temperature in PBS containing 6% BSA and 0.25% Triton X-100. Cells were then stained with rabbit anti-LC3 antibody (1:200 dilution, Novus) and FITC-labeled secondary antibody (1:2000 dilution, KPL).
For in vivo experiments, paraffin-embedded tissue sections were treated with improved citrate antigen retrieval solution (Beyotime) for 30 min at 100 °C. Following twice wash with PBS, they were treated with 0.25% Triton X-100 for 15 min and blocked with PBS containing 6% BSA for 45 min at room temperature. Then, tissue sections were stained with rabbit anti-LC3 antibody (1:200 dilution, Novus) or rabbit Atg13 antibody (1:200 dilution, Cell Signaling, 13468S) and Anti-rabbit IgG (H+L), F(ab’)2 Fragment (Alexa Fluor® 488 Conjugate) or Anti-rabbit IgG (H+L), F(ab’)2 Fragment (Alexa Fluor® 594 Conjugate) secondary antibody (1:300 dilution, Cell Signaling, 4412S/8889S).
All stained samples were visualized under a laser confocal microscope (Leica TCS SP5).
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Western Blot Analysis of Autophagy and Apoptosis Markers in Osteoblasts

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Osteoblasts were lysed in RIPA lysis buffer with protease inhibitors (Beyotime, Shanghai, China). Proteins were collected after centrifugation. The protein concentrations were determined by BCA Protein Assay Kit (Beyotime, China). The protein samples were subjected to SDS-PAGE (8–12%), and then transferred onto PVDF membranes (Millipore, Germany). After blocking with 5% skimmed milk (Bio-Rad, USA) for at least 1 h, the membranes were incubated with primary antibodies overnight at 4°C, including rabbit anti-LC3 antibody (1 : 1000, Novus), rabbit anti-Bnip3 antibody (1 : 2000, Abcam), rabbit anti-P62 antibody (1 : 1000, Abcam), rabbit anti-Beclin1antibody (1 : 1000, Abcam), mouse anti-caspase 3 antibody (1 : 500, Santa Cruz), rabbit anti-cleaved caspase 3 antibody (1 : 1000, CST), rabbit anti-Bcl-2 antibody (1 : 1000, CST), rabbit anti-Bax antibody (1 : 1000, CST) and mouse anti-β-actin antibody (1 : 8000, Tianjin Sungene Biotech). Depending on the origin of the primary antibodies, the secondary antibody (1 : 7000 – 1 : 10000) was added and incubated for 1 h at room temperature. The intensities of bands were quantified with Fusion software (VILBER LOURMAT, Germany). All the results were normalized to β-actin.
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Western Blot Analysis of Autophagy

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Flag was detected using an anti-Flag M2 HRP antibody (1:2000) (Sigma-Aldrich, St. Louis, MO). The phosphospecific Beclin 1 S90 antibody was produced by PhosphoSolutions (Aurora, CO). Briefly, synthetic peptides corresponding to phosphorylated and dephosphorylated S90 of Beclin 1 were injected to two rabbits and sera were purified using a phosphopeptide affinity column followed by a dephosphopeptide affinity column. The phosphospecific Beclin 1 S90 antibody was used at a concentration of 1:500. Beclin 1, HSP27, p-HSP27, Actin, MK2, p62, LC3, TOM20, PDI, and GAPDH were detected using a rabbit or goat anti-Beclin 1 antibody (Santa Cruz Biotechnology, Dallas, TX, 1:1000 dilution), a rabbit anti-HSP27 antibody (Santa Cruz Biotechnology, 1:200 dilution), a rabbit anti-p-HSP27 antibody (Santa Cruz Biotechnology, 1:200 dilution), an anti-β-Actin HRP antibody (Santa Cruz Biotechnology, 1:2000 dilution), a rabbit anti-MK2 antibody (Cell Signaling Technology, Beverly, MA; 1:1000 dilution), a mouse anti-p62 antibody (Abnova, Walnut, CA; 1:2000 dilution) a rabbit anti-LC3 antibody (Novus Biologicals, Littleton, CO; 1:1000 dilution), a rabbit anti-TOM20 antibody (Santa Cruz Biotechnology; 1:1000 dilution), a rabbit anti-PDI antibody (Cell Signaling Techology; 1:1000 dilution), and a mouse anti-GAPDH antibody (Chemicon International, Temecula, CA; 1:000 dilution).
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4

GSK3 and Autophagy Regulation in Testis

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Testis and TM4 cell samples were homogenized in RIPA buffer (50 mM Tris-HCl pH 7.4, 150 mM NaCl, 1% NP40, 0.25% Na-deoxycholate, 1 mM PMSF, 1 mM sodium orthovanadate with Roche EDTA-free complete mini protease inhibitor cocktail, no. 11836170001). The protein concentration was measured with the BCA Protein Assay Kit (Pierce, Rockford, IL, USA)according to a previous publication [31 (link)]. Forty micrograms of protein extract were used for electrophoresis on a 15% or 10% SDS-PAGE gel. The following primary antibodies were used: rabbit anti-phospho-GSK3α (Ser21) antibody, rabbit anti-GSK3α antibody, rabbit anti-phospho-GSK3β (Ser9) antibody, rabbit anti-GSK3β antibody, rabbit anti-LC3 antibody (Novus Biologicals, NB100-2220, USA) and rabbit anti-DRP1 (phospho Ser637) antibody (1:1000, Abcam, ab193216, MA, USA). Protein loading controls for each experiment using rabbit anti-α-tubulin antibody (1:1000, Bioworld, bs1699, China). All the operations were carried out according to the recommended protocols provided by the manufacturers.
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