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9 protocols using mouse on mouse m o m basic kit

1

Immunostaining of Cardiac Tissue Sections

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Frozen heart sections embedded in OCT compound (Tissue-Tek; Sakura, UAE) were cut into 8 μm sections with a cryostat (Leica, Germany), permeabilized, blocked with Blocking-One (Nacalai Tesque, Japan), and labeled with primary antibodies, followed by fluorochrome-conjugated secondary antibodies. Counterstaining for DAPI (nuclei), phalloidin (F-actin), and wheat germ agglutinin (WGA; cell membrane) was also performed. Sections were covered with a fluorescence mounting medium (Dako, USA) and examined using an inverted fluorescence microscope (BZ-X710, Keyence, Japan), or a confocal scanning system mounted on a IX81 inverted microscope (FV-1000, Olympus, Japan) (Hashimoto et al., 2018 (link)). The primary antibodies used were for Ki67 (clone SP6, Abcam, UK), phospho-histone H3 at Ser-10 (06-570, EMD Millipore, USA), PCM-1 (HPA023370, Sigma-Aldrich), sarcomeric α-actinin (A7811, Sigma-Aldrich), and the FLAG tag (F1804, Sigma-Aldrich). When using mouse-derived antibodies, the Mouse on Mouse (M.O.M.) Basic Kit (Vector, CA, USA) was used. Essentially the same staining protocol was applied for CMs from aged mice isolated with a fixation digestion method (see below). In freshly isolated fetal CMs, fixation was done with 4% paraformaldehyde before permeabilization.
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2

Immunofluorescence Analysis of Cardiac Cell Markers

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For tissue analyses, frozen heart sections embedded in OCT compound (Tissue-Tek®; Sakura, UAE) were cut at 8 µm sections with a cryostat (Leica, Germany), permeabilized, blocked with Blocking-One (Nacalai Tesque, Japan), and double-labeled with primary antibodies for sarcomeric α-actinin (Sigma-Aldrich) and Fam64a. The latter antibody was raised against a synthetic peptide corresponding to residues 102–114 of mouse Fam64a (CQSGTKWLMETQV). Samples were then labeled with fluorochrome-conjugated secondary antibodies (Thermo-Fisher) as described25 (link), 26 (link). When necessary, DAPI staining for DNA or phalloidin staining for F-actin filaments was also performed. The same protocol was applied for cultured cells, except that fixation with 4% paraformaldehyde was first performed before permeabilization. Primary antibodies used were against Ki67 (Abcam), phospho-histone H3 at Ser-10 (EMD Millipore, MA, USA), sarcomeric α-actinin (Sigma-Aldrich), and Fam64a (Bioss Antibody, GA, USA). Another Fam64a antibody, which was raised as stated above, was also used. When using mouse-derived antibodies, the Mouse on Mouse (M.O.M.) Basic Kit (Vector, CA, USA) was used. Cells or sections covered with fluorescence mounting medium (DAKO, CA, USA) were examined using a confocal system mounted on a IX81 inverted microscope (Olympus).
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3

Immunofluorescent Labeling of Pancreatic Hormones

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Pancreata were fixed overnight in 4% formaldehyde and embedded in paraffin. Sections were rehydrated and heated for 20 min in Target Retrieval Solution (pH 6.1, Dako). After blocking with 20% normal goat serum (Dako) in PBS, slides were incubated with 1/1,000 anti-hGH monoclonal antibody (ab15317, Abcam) in Antibody Diluent (Dako). For double immunofluorescent labeling, 1/50,000 rabbit anti-serotonin (Immunostar, #20080) or 1/2,000 polyclonal anti-GLUT2 (07-1402, Millipore) was combined with 1/10,000 diluted guinea pig anti-insulin antibody (a gift of Dr. Van Schravendijk, VUB, Brussels) and detected with anti-rabbit Cy3 and anti-guinea pig FITC, respectively (both from Jackson ImmunoResearch Laboratories). For MIP-GFP and RIP-Cre mice, frozen sections were stained with 1/10,000 rabbit anti-serotonin or 1/200 mouse anti-hGH (blocking with Mouse on Mouse [M.O.M.] Basic Kit from Vector Laboratories) and costained with 1/2,000 guinea pig anti-insulin in sections from RIP-Cre mice. For MIP-GFP, direct fluorescence for GFP was used to detect β cells.
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4

Immunohistochemical Analysis of Tumor Infiltrates

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Excised tumors from mice were fixed with 10% neutral buffered formalin for 24 hours and changed to 70% ethanol. Tumors were paraffin-embedded and sectioned by the Brain Tumor Research Center at UCSF. For IHC, slides were deparaffinized and antigen retrieval was performed using a pressure cooker. The Mouse on Mouse (M.O.M.™) basic kit (Vector laboratories) was used for masking endogenous mouse antigen. The VECTASTAIN® ABC reagent (Vector laboratories) was used for signal detection. The CD45 antibody (05–1410) was purchased from EMD Millipore and was used at a concentration of 1:50. The CD38 (ab216343), CD68 (ab955) and TMEM119 (ab209064) antibodies were purchased from Abcam and were used at a concentration of 1:100. The CD206 antibody (AF2535SP) was purchased from R&D Systems and was used at a concentration of 1:50. Images were taken using a Zeiss AxioImager M1 microscope. Cells were quantified using Image J.
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5

Immunohistochemical Staining Protocol

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5-μm sections were deparaffinized with xylene and rehydrated in a graded ethanol series. Antigen retrieval was performed by boiling the sections in low-pH citrate buffer for 15 minutes. Sections were treated with 3% (v/v) H2O2 for 10 min at RT, blocked with 5% normal goat serum (Sigma) for 1 hour at RT and incubated with the primary antibody overnight at 4°C. Antigens of interest were visualized using the Vectastain ABC kit (Vector Laboratories) or by species-specific fluorochrome-conjugated secondary antibodies. For stainings with mouse-derived antibodies, Mouse on mouse (M.O.M.) Basic Kit (Vector Laboratories) was used following the kit instructions. Cell nuclei were stained with DAPI (Invitrogen) and coverslips were mounted with Mounting Medium (Dako). The following antibodies were used in this study: mouse α-SMA at 1:500 dilution (Sigma), rabbit VEGFR-2 at 1:100 dilution (Cell signaling), mouse PCNA (Sigma) at 1:200, PCK (Dako) at 1:200, Dlk (Abcam) at 1:150.
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6

Immunohistochemistry of Neuronal and Glial Markers

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Rabbit anti-KCC2 pan polyclonal antibodies [32 (link)] were produced and purified by Innovagen AB and used at a dilution of 1:1000 for IHC. Primary antibodies Mouse anti-NeuN, clone A60 (Merck Millipore, MAB377, 1:300), mouse anti-GFAP (Merck Millipore, MAB360, 1:500), rabbit anti-Iba1 (Wako, 019-19741, 1:500), and rabbit anti-active® caspase 3 (Promega, G7481, 1:200) were used. The NGFR p75 (MC-192) mouse antibody was from Santa Cruz and was used 1:1000 with the blocking solution from Mouse on Mouse (M.O.M.™) Basic Kit (Vector Laboratories). Secondary antibodies, goat anti-rabbit, or anti-mouse conjugated to Alexa Fluor® 488, 555, 568, or 647 were used at dilutions of 1:500. p75NTR KO mice were obtained from The Jackson Laboratory (Bar Harbor, ME, USA) [33 (link)].
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7

Immunofluorescence Analysis of Frozen Tissues

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Optimal cutting temperature compound (OCT)-embedded frozen sections (10 μm thick) were thawed at room temperature and fixed in methanol/acetone (1:1) for 5 min at −20 °C. Sections were blocked with 5% normal goat serum (Sigma) for 60 min at room temperature and incubated with the primary antibody overnight at 4 °C. Species-specific fluorochrome-conjugated Alexa 488 and Alexa 568 (Invitrogen, #A-11034, # O-6382, # A-11055, # A-21141, #A-11011, #A-11004, #A-11077) at 1:200 were used as secondary antibodies for 30 min at room temperature. For staining with mouse-derived antibodies, Mouse on mouse (M.O.M.) Basic Kit (Vector Laboratories) was used in accordance with the manufacturer's instructions. Cell nuclei were stained with 4,6-diamidino-2-phenylindole (Invitrogen) and cover slips were mounted with Mounting Medium (Dako). The TdT-mediated dUTP nick end labelling assay was performed in accordance with the manufacturer's instructions (Promega). Chemerin/CD31 immunofluorescence was performed after heat-induced antigen retrieval.
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8

Quantifying Tumor Proliferation and Apoptosis

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Tissue sections (7 μm thick) were de-paraffinized and processed for antigen retrieval by heating in Antigen Unmasking Solution (Vector Laboratories) for 30 minutes. Tissue sections were stained using Mouse on Mouse (M.O.M.) Basic Kit (Vector Laboratories) according to the vendor protocol. Primary antibodies against Ki67 and cleaved caspase-3 were used. Alexa Fluor® Plus 488 and DyLight 549 Streptavidin secondary antibodies were used. Slides were counterstained with DAPI and mounted with Prolong Diamond Antifade reagent. Images were taken using Leica DMI 3000 fluorescent microscope with a 20X objective. Four to six different tumors for each condition were analyzed using CellProfiler 3.1.8 (RRID:SCR_007358). Statistical significance was determined by two-tailed Student’s t-tests.
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9

Immunohistochemistry of Mouse Tumor Samples

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Extracted tumors from mice were fixed with 10% neutral buffered formalin (Sigma) for 24 h and changed to 70% ethanol (Sigma). Tumors were paraffin-embedded and sectioned by the Brain Tumor Research Center at UCSF and CHLA. For IHC, slides were deparaffinized, and antigen retrieval was performed using a pressure cooker. The Mouse on Mouse (M.O.M.) basic kit (Vector laboratories) was used for masking endogenous mouse antigen. The VECTASTAIN ABC kit (Vector laboratories) was used for signal detection. Images were taken using the Revolve microscope (ECHO).
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