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11 protocols using phospho p44 42 mapk p erk1 2

1

Immunostaining of Nuclear Envelope Proteins

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Primary antibodies were sourced as follows: lamin A/C (N-18, sc-6215, Santa Cruz), SUN2 [kind gifts from Dr Didier Hodzic, University of Washington, US and (67 (link))], emerin (NCL-EMERIN, Novacastra), GFP (ab290, ab13970, Abcam), GAPDH (sc-25778, Santa Cruz), β-actin (A5316, Sigma), α-tubulin (ab52866, Abcam), phospho-p44/42 MAPK (pERK1/2) (4370, Cell Signalling Technology), p44/42 MAPK (tERK1/2) (9102, Cell Signalling Technology), V5 (R96025, Invitrogen), nesprin-1 (MANNES1A and MANNES1E (52 (link)), generated against the C-terminus of the nesprin-1 giant), myogenin (sc-576, Santa Cruz), myosin (clone A4.1025, against all isoforms expressed by MYH1, Alexis Corporation), HA (ab1424, Abcam), KLC-1/2 (63–90, a kind gift from Prof Scott Brady, University of Illinois at Chicago, USA). Alexa fluorophore (488/546/647)-conjugated secondary antibodies were from Invitrogen. HRP-conjugated secondary antibodies were from Amersham. IF staining was performed as described previously (13 (link)). In particular, to further define the subcellular localisation for GFP-tagged nesprin-1α2, the transfected cells were fixed by 4% paraformaldehyde/PBS, then permeabilized using either 0.001% digitonin/PBS or 0.5% NP40/PBS.
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2

Western Blot Analysis of FGF2, GPR30, and MAPK Signaling

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Samples were homogenized in RIPA buffer (Beyotime Biotechnology) with protease and phosphatase Inhibitor (Thermo Fisher). Western blot analyses were carried out in accordance with standard protocols, and membranes were incubated with anti-FGF2 (1:200, Proteintech), anti-GPR30 (1:100, Abcam), phospho-Mek (1:1000, Cell Signaling Technology), Mek (1:1000, Cell Signaling Technology), phospho-p44/42 MAPK (p-Erk1/2, 1:1000, Cell Signaling Technology), p44/42 MAPK (Erk1/2, 1:1000, Cell Signaling Technology), p-FGFR1 (1:500, Abcam), and GAPDH (1:5000, Proteintech). The membranes were incubated with HRP-conjugated antibodies goat anti-rabbit (1:10000, Abcam) or goat anti-mouse (1:10000, Abcam). They were imaged on the Image Quant LAS 4000 mini biomolecular imager (GE Healthcare Life Sciences) after being applied with EZ-ECL (Biological Industries). The relative protein levels were measured by Image J software (National Institutes of Health) and normalized over the expression of GAPDH.
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3

Phosphorylation of Mitogen-Activated Protein Kinase in RPE Cells and HUVECs

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RPE cells and HUVECs were treated as described above. The cells were then prepared using protein extraction and protease inhibitor kits (Pierce, Rockford, IL), and lysates were cleared by centrifugation at 12,000 g at 4°C. The supernatants were collected, and the protein content of each lysate was measured with a BCA protein assay kit (Pierce) according to the manufacturer’s instructions. Equal amounts of protein were loaded and analyzed by immunoblot. The proteins were visualized with enhanced chemiluminescence Western blot detection reagents (Pierce). Phosphorylated-p44/42 mitogen-activated protein kinase was detected using a primary antibody (phospho-p44/42 MAPK [p-ERK 1/2], 1:2000; Cat#4370, Cell Signaling Technology, Danvers, MA) and an HRP-conjugated secondary antibody (goat anti-rabbit IgG; 1:6000; ZSGB-BIO, Beijing, China); band densities were quantified by densitometry using Image J software (National Institutes of Health, Bethesda, MD) and were normalized to GAPDH. Western blot analyses were repeated three times, and qualitatively similar results were obtained.
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4

Quantitative Western Blot Analysis

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Western blotting experiments were carried out according to our previous study [26 (link), 27 (link)]. Briefly, cells were lysed in RIPA buffer (1% NP-40, 0.5% sodium deoxycholate, 0.1% SDS, 10 ng/mL PMSF, 0.03% aprotinin, and 1 μM sodium orthovanadate) on ice for 30 min. Protein concentration of samples was measured with the bicinchoninic acid (BCA) assay method. Proteins were separated on 8–12% SDS-PAGE gels and transferred to nitrocellulose membrane (Millipore, USA). Membranes were blocked with 5% BSA in TBS with 0.1% tween-20 and incubated with primary antibodies as follows: anti-TRPM7 (1 : 1000, Abcam, #ab85016, USA), anti-p-Akt-Ser473 (1 : 1000, Cell Signaling Technology, #4060, Inc., USA), anti-Akt (1 : 1000, Cell Signaling Technology, #2920 Inc., USA), phospho-p44/42 MAPK (p-ERK1/2, 1 : 1000, Cell Signaling Technology, #8544, Inc., USA), anti-ERK1/2 (1 : 1000, Cell Signaling Technology, #4696, Inc., USA), and anti-β-actin (1 : 1000, Cell Signaling Technology, #3700, Inc., USA) antibodies followed by incubation with corresponding horseradish peroxidase-conjugated secondary antibodies were used against each primary antibody. Bands were developed with a chemiluminescence reagent system (Beyotime, China).
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5

Quantifying HSP90, ERK1/2, and p-ERK1/2

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Primary antibodies anti-Heat-shock protein 90 (HSP90), p44/42 MAPK (ERK1/2), and phospho-p44/42 MAPK (p-ERK1/2) were all purchased from Cell Signaling Technology (The Netherlands). Secondary anti-rabbit antibody was purchased from ImmunoReagents, Inc. (North Carolina, USA). All antibodies were used according to the manufacturer's instructions.
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6

Rat Pheochromocytoma Cell Signaling Assay

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Rat pheochromocytoma cells (PC12) stably transfected with rat M1 mAChR (PC12M1 cells) were seeded in 6-well plates at a density of 2×106 cells/well. The following day, cells were washed twice with RPM1, and returned to the incubator with serum free media (starvation medium containing RPMI, 2mM Glutamine, 1% penicillin- streptomycin, 2.5µg/ml Amphotericin B, 0.1 mg/ml G418). On the next day cells were pretreated for 3 hours with AF710B at concentrations ranging from 0.1nM to 100nM, and then carbachol (10nM) was added for 10 minutes. In each plate, one well served as a control (no treatment) and one well as a positive reference in which the cells were treated with carbachol (10nM). Following this procedure, cells were collected and extracted with Ripa buffer (Sigma, R-0278, 200µl) containing a Protease inhibitor Cocktail (Sigma, 1:100) and Phenylmethylsulfonyl fluoride (Sigma, 1:1000). Phospho-p44/42 MAPK (p-ERK1/2) (1:1000, Cell signaling) and Phospho-CREB (ser 133) (1:1000, Cell signaling) were probed with anti-rabbit antibodies.
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7

Osteoclastogenic Signaling in mMSCs

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mMSCs were cultured on CS (control), SCS, CCS or BCS (N=6) for 7 days. The total protein from each group (40 µg) was fractionated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto a nitrocellulose membrane. The latter was blocked with 5% non-fat milk and incubated with primary antibodies against OPG (1:300, 11383, Santa Cruz Biotechnology Inc., Dallas, TX, USA), RANKL (1:300, 7628, Santa Cruz Biotechnology Inc.), β-actin (1:1000, 3700, Cell Signaling Technology, Danvers, MA,USA), Phospho-p44/42 MAPK (p-ERK1/2) (Thr202/Tyr204) (1:800, 4370, Cell Signaling Technology), total-ERK1/2 (1:1000, 4695, Cell Signaling Technology), Phospho-p38 MAPK (Thr180/Tyr182) (1:800, 4511, Cell Signaling Technology), total-p38 (1:1000, 9212, Cell Signaling Technology), Phospho-Akt (Thr308) (1:800, 4056, Cell Signaling Technology) and total-Akt (1:1000, 4691, Cell Signaling Technology). Signals were revealed after incubation with horseradish peroxidase-conjugated secondary antibody (1:5000, Santa Cruz Biotechnology Inc.) and enhanced chemiluminescence detection (GE Healthcare, Piscataway, NJ, USA). The stained bands were scanned and quantified using a densitometer (Syngene Bioimaging System; Frederick, MD, USA) and Scion Image software (Frederick). Protein expression levels were normalized against β-actin for each sample.
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8

FGF2-induced signaling cascades in NIH 3T3 cells

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FGF2-induced activation of signaling cascades in NIH 3T3 cells and western blotting was performed as described [20 (link)]. Western blotting analysis was accomplished using the following primary antibodies against: phospho-FGF Receptor (55H2) (Cell Signaling Technology, Danvers, MA,USA), phospho-p44/42 MAPK (p-Erk1/2) (Cell Signaling Technology), p44/42 MAPK (Erk1/2) (Cell Signaling Technology), phospho-PLC γ1 (Tyr 783) (Santa Cruz Biotechnology) and γ-Tubulin (Sigma). To assess the level of FGFR1 expression in U2OS, U2OSR1, HCC-15 and NCI-H520 cell lines whole-cell lysates were used and probed with anti-FGFR1 antibody (9740, Cell Signaling Technology). Detection was performed with HRP-conjugated secondary antibodies and the ECL reagent (Thermo Fischer Scientific, Waltham, MA, USA) according to the manufacturer’s protocol.
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9

Western Blot Analysis of Signaling Proteins

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Cells were lysed after NaB treatment with 1X Lysis Buffer (Cell Lysis Buffer 10X, Cell Signaling Technology), and protein was quantified using the Bradford protein assay (Thermo Scientific). For blotting, 20 µg of protein were separated by SDS-PAGE and transferred to a PVDF membrane.
After 1h with blocking solution (5%BSA in TTBS), the membrane was incubated overnight at 4 °C with primary antibodies against BMI1 (1:1000; Cell Signaling), Phospho-p44/42 MAPK (pErk1/2, 1:2000; Cell Signaling), p44/42 MAPK (Erk1/2, 1:1000; Cell Signaling) and β-actin (1:2000; Santa Cruz Biotechnology) as protein control. Incubation of primary antibodies was followed by incubation with the secondary antibody (1:2000; Sigma Aldrich) for 2 h. Chemoluminescence was detected using ECL Western Blotting substrate (Pierce, Thermo Scientific) and analyzed using ImageQuant LAS 500 (GE Healthcare Life Sciences, Little Chalfont, UK). Immunodetection signal were analyzed using ImageJ (National Institutes of Health, Bethesda, USA).
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10

Cardiac Microtissue Protein Analysis

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Cardiac microtissue protein was isolated after six days of culture following the manufacturer’s protocol for TRIzol Reagent (Invitrogen). Once the protein was isolated, the protein pellet was solubilized in a 1% SDS solution in de-ionized water. Proteins were separated by electrophoresis in Novex Tris-Glycine gels (Life technologies) and dry transferred using the iBlot (Life technologies) to a nitrocellulose iBlot Transfer Stack (Life technologies). Membranes were probed for Phospho-p44/42 MAPK (pERK1/2) (Cell Signaling Technology), p44/42 MAPK (ERK1/2) (Cell Signaling Technology), or GAPDH (Millipore) antibodies. Secondary antibodies were peroxidase conjugated (DAKO). Membranes were developed with ECL reagent LuminataClassico Substrate (Millipore).
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