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Ufc901008

Manufactured by Merck Group
Sourced in Germany, France, United States

UFC901008 is a laboratory instrument used for protein analysis. It is designed to separate and quantify proteins based on their molecular weight and charge. The device employs a combination of electrophoresis and detection techniques to provide precise and reliable protein analysis data.

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7 protocols using ufc901008

1

Porcine Bladder ECM Isolation and Purification

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Adult porcine bladders were acquired (Tissue Source, LLC, Lafayette, IN) and urinary bladder extracellular matrix (ECM) was isolated as previously described [17 (link)]. ECM sheets were then lyophilized for 72 hours, comminuted through a 40-mesh sieve in a Thomas Scientific Wiley Mini Mill, and tumbled in a Fisher Scientific tube revolver in normal saline at 10 mg/mL for 24 hours at room temperature. ECM particles were pelleted via centrifugation at 100,000 rpm for 30 minutes and supernatant was passed through 100 um cell strainers and then 0.22-micron sterile filters. Resulting liquid was concentrated 200-fold by volume in 10kDa cutoff columns (MilliporeSigma UFC901008, Darmstadt, Germany) and protein concentration was approximated using a Nanodrop A280 measurement to verify cutoff column filter integrity. Samples were stored at −20°C until use.
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2

Isolation and Culture of Murine Peritoneal Macrophages

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Cells were obtained by peritoneal lavage of C57BL/6 mice. Briefly, mice were euthanized and injected i.p. with 5 ml ice-cold PBS using a 24-gauge needle, and the peritoneal lavage fluid was then captured using the same syringe. Cells were washed in complete medium and cultured in 12- or 6-well non-TC-treated cell culture plates (Corning, Corning, NY) for 12–48 hr. In some experiments, medium was supplemented with recombinant cytokines (Peprotech, Rocky Hill, NJ) and/or blocking antibodies as indicated. In other experiments, medium was supplemented with conditioned medium from tumor cell lines, which was filtered through a 0.22 uM filter to remove cellular debris. B16-conditioned medium was concentrated 20X using a 10 kDa centrifugal filter unit (cat #UFC901008, Millipore-Sigma). After culture, cells were washed to remove suspension cells, and macrophages were lifted by vigorous pipetting of ice-cold PBS. Macrophages were identified as live F4/80 + cells by flow cytometry.
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3

Antibody Conjugation to Fluorescent Dye

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The 2 ml aliquot was chromatographed on a peptide-affinity column (peptide corresponding to epitope 4 of CTR and conjugated (linker maleimidocaproyl-N-hydroxysuccinimide) to thiopropyl sepharose 6B ~4 ml bed volume, prepared by Mimotopes (Clayton, VIC, Australia). Once loaded, the pump was stopped for 5 min to allow binding and then the affinity column was washed with PBS. The breakthrough contained unbound conjugate in which the binding determinants were most likely compromised. The bulk of the conjugated material bound to the column was eluted with 100 mM glycine buffer (pH 2.2) and 1 ml fractions were collected into 100μl TRIS buffer (pH 9). Active fractions were concentrated with Amicon Ultra-15 centrifugal filter devices-10 K MWCO (15 ml: EMD-Millipore UFC901008), washed with PBS/1 mM EDTA (prefiltered 0.22 μm) and concentrated to ~1 ml. Using the Nanodrop1000, the λ1 (560 nm) and λ3 (280 nm) were recorded and used to calculate the amount of protein, the percentage of recovery and the degree of labelling (DOL) with AF568:NHS esters for the antibody conjugate. The final DOL was 4.4 and the yield 36%. The protein profile was checked on an 8% acrylamide gels stained with Coomassie (not shown). This overall protocol as outlined for the conjugation of mAb2C4 produced consistent labelling of active mAb2C4:AF568.
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4

Protein Extraction Protocol for Cell Culture

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Cells were seeded (1 × 106 cells/flask) and allowed to attach for 24 h. The medium was then replaced by serum free medium and following 24 h the samples were collected on ice as following: First the medium was transferred and proteases and phosphatases inhibitors (protease inhibitors cocktail (1:100, 539134, Calbiochem, San Diego, CA, USA), PMSF (2 mM, P7626, Sigma) and sodium orthovandate (1 mM, S6508, Sigma)) were added to the medium. The cells were washed with cold PBS, RIPA lysis buffer (in mM: 50 Tris-HCl pH 8.0, 150 NaCl, 1% NP-40, 0.5% Sodium Deoxycholate, and 0.1% SDS) containing proteases and phosphatases inhibitors was added and the cells were scraped and collected. The collected medium was transferred to centrifugal filter device 10 K (UFC901008, Merck–Millipore, Molsheim, France), centrifuged (4000 g, 20 min), and the concentrated sample was collected for further analysis. The cells incubated on ice for 10 min, centrifuged (16000 g, 20 min), and the supernatant was collected for further analysis.
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5

Quantifying TRAIL in Concentrated MSC Media

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Two million transduced MSCs were cultured in one T175 flask for 3 days with 20 mL of media. Proteins were concentrated 50-fold through the use of the centrifugal concentration column (Millipore UFC901008, MWCO 10 kDa). TRAIL levels in concentrated media were determined with the use of the TRAIL quantification ELISA kit (R&D Systems).
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6

TRAIL secretion in NSCLC and TNBC

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One million NSCLC cells (H460 and H1650) or TNBC cells (MDA-MB-468 and HCC70) were cultured with complete medium (10% FBS). The following day, the cells were untreated or treated with metformin in the same medium containing 0.5% FBS (H460 and H1650: 30 h; MDA-MB-468 and HCC70: 48 h). The CM was collected, centrifuged, and concentrated 50-fold by a centrifugal column (UFC901008, MWCO 10 kDa) (Millipore, Billerica, MA, USA). TRAIL levels in the CM were determined by a quantification ELISA (R&D Systems).
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7

Metformin modulates TRAIL secretion

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One million NSCLC cells (H460 and H1650) or TNBC cells (MDA-MB-468 and HCC70) were cultured with complete medium (10% FBS). The following day, the cells were untreated or treated with metformin in the same medium containing 0.5% FBS (H460 and H1650: 30h; MDA-MB-468 and HCC70: 48h). The conditioned medium (CM) were collected, centrifuged, and concentrated 50-fold by a centrifugal column (UFC901008, MWCO 10 KD) (Millipore, Billerica, MA). TRAIL levels in the CM were determined by a quantification ELISA (R&D Systems).
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