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Ultrasonic crasher

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The Ultrasonic Crasher is a laboratory instrument designed to disrupt cellular structures using high-frequency sound waves. It can be used to extract and isolate cellular components, such as proteins or nucleic acids, from a variety of sample types.

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4 protocols using ultrasonic crasher

1

Recombinant Protein Production Using Intein Fusion

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Escherichia coli BL21(DE3) cells harboring plasmid pET-P-Intein-ELK16 or pET-Trx-P-Intein-ELK16 were inoculated into Luria–Bertani (LB) medium supplemented with 50 mg/L kanamycin and incubated at 37 °C with shaking (250 rpm). Isopropyl β-D-1-thiogalactopyranoside was added to a final concentration of 0.2 mM to initiate protein expression when OD600 reached 0.4–0.6. The cultures were then continued for an additional 6 h at 30 °C (for the peptide GLP-1 and Ex4, expression was carried out at 37 °C for 6 h to achieve better expression), and then harvested by centrifugation at 6000×g for 10 min and pellets were stored at −70 °C for further assay and analysis.
Harvested cell pellets were re-suspended in buffer B1 (20 mM Tris–HCl, 500 mM NaCl, 1 mM EDTA, pH 8.5) to 10 OD culture/mL, followed by sonication (Ultrasonic crasher; Scientz JY92-IIN, Ningbo, China). The soluble fractions were isolated from the aggregates by centrifugation at 15,000×g for 15 min at 4 °C. The precipitates were washed twice with buffer B1, and re-suspended in the same volume of Buffer B3 (20 mM Tris–HCl, 500 mM NaCl, 1 mM EDTA, 40 mM dithiothreitol, pH 8.5). Intein-mediated cleavage reactions were performed by incubating the samples at 4 °C overnight. Then, the soluble and insoluble fractions were separated by centrifugation at 15,000×g for 15 min at 4 °C.
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2

Intein-Mediated Protein Purification Technique

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Harvested cell pellets were re-suspended in buffer B1 (20 mM Tris-HCL, 500 mM NaCl, 1 mM EDTA, pH 8.5) to 10 OD culture/ml, followed by sonication (Ultrasonic crasher, Scientz JY92-IIN, Ningbo, China). The soluble fractions were isolated from the lysates by centrifugation at 11,000 rpm for 10 min at 4 °C. The precipitates were washed twice with buffer B1, resuspended in the same volume of Buffer B3 (20 mM Tris-HCl, 500 mM NaCl, 1 mM EDTA, 40 mM Dithiothreitol, pH 8.5). Intein-mediated cleavage reactions were performed by incubating the samples at 4 °C overnight. Then the soluble and insoluble fractions were separated by centrifugation at 11,000 rpm for 15 min at 4 °C. The protein samples were analyzed by denaturing polyacrylamide gel electrophoresis using precast NuPAGE® precast 4–12% Bis-Tris gels from Invitrogen, followed by staining with Coomassie Brilliant Blue G-250. The compositions and protein concentrations of all samples were determined densitometrically with Quantity One software (Bio-Rad Laboratories, Hercules, CA, USA) using bovine serum albumin (BSA) and aprotinin as standards, and were adjusted according to the loading volume of the protein samples.
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3

FOXO1 ChIP Assay in Endometrium

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Chromatin immunoprecipitation (ChIP) assay was performed using the ChIP Assay Kit (P2078, Beyotime, China). In brief, the endometrium tissues were minced into small pieces (2-3 mm) and then cross-linked with 1% formaldehyde for 10 min. The chromatin was fragmented by an Ultrasonic Crasher (Scientz, China), and incubated with anti-FOXO1 (1:100) or rabbit IgG (1:100, 2729S, CST). The immunoprecipitated DNA fragments were purified with the DNA Purification Kit (D0033, Beyotime, China) for PCR analysis with specific primers (Supplemental Table S1).
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4

IFNT and FOXO1 Regulate Prostaglandin Synthesis

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The EEC seeded into 6-well plates (7.5 × 10 5 cells in 2 mL of culture medium/well) were treated with 0.5 ng/mL IFNT for 12 h or transfected with 100 nM siFOXO1-1 for 48 h. For combined treatment, after transfection with siFOXO1-1 for 36 h, the cells were treated with IFNT for 12 h. After 200 μL of the culture medium was taken, the cells were washed 3 times, collected in 200 μL of PBS, and fragmented by an Ultrasonic Crasher (Scientz, China). The concentration of PGF 2α or PGE 2 was determined in the cell lysate or culture medium after a 5-fold dilution with the extraction buffer from the PGF 2α (MM-7510702, Meimian, China) or PGE 2 (MM-7521202, Meimian, China) ELISA kit. The assay sensitivity of each kit was 6 pg/mL and the cross reactivity was <0.01%. The intra-or interassay coefficient of variation was <12%. In the blank medium, both PGF 2α and PGE 2 were not detected.
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