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4 protocols using pe mouse anti human cd63

1

Isolation and Characterization of Extracellular Vesicles from Cancer Patients

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EVs from patients with cancer and normal healthy donors were isolated using a Pan-Exosome Isolation Kit, Pan (Miltenyi Biotec). Citrated human plasma (300 µL) was centrifuged at 15 000g at 4°C for 5 minutes, and the supernatant was incubated with pan-exosome beads conjugated with anti-human CD9/CD63/CD81. The beads were collected using a magnet. EV binding to beads was confirmed by flow cytometric analysis of the immunoprecipitated EV using FITC mouse anti-human CD9 or PE mouse anti-human CD63 (both from BD Biosciences).
To assess the ability of the immunoprecipitated EV to activate FXII, control beads or beads that had been incubated with plasma from healthy controls or patients with cancer were added to aliquots of the same normal plasma. FXII activation was assessed by hydrolysis of S-2302.
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2

Exosomes Isolation and Uptake in Prostate Cancer

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Enriched exosomes were captured using the CD63+ Dynabead exosomes isolation kit (Invitrogen, Life Technologies #10606D). The Flow Analysis of stromal exosomes bound to Dynabeads conjugated with antibody was done according to the manufacture’s protocol. Briefly, 10 µl of exosomes (200 µg/mL) were incubated with 90 µl of CD63+ Dynabeads overnight at 4°C. Dynabead magnet was then used to positively select for bound exosomes which were then stained with PE Mouse Anti-Human CD63 (BD Bioscience, San Jose, CA). Isotype control was stained by Simultest IgG2a/IgG1 (BD Bioscience, 340394). Flow cytometry was performed on a Accuri C6 System (BD Bioscience) and analyzed on Flow Jo software.
To analyze exosomes uptaken by prostate cancer cells, exosomes were pre-labeled by PKH67 dye (Sigma), and 3000 spin columns were used to remove extra dye. The dyed exosomes were added to RPMI medium to culture cancer cells for 3 hr and then flow cytometry was performed to measure fluorescence intensity of cells.
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3

EV Profiling by Flow Cytometry

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EV analysis with flow cytometry was performed using antibody coated beads. The anti-CD63 coated beads were commercially acquired (Exosome-Human CD63 isolation/detection reagent (from cell culture media), Thermo Fisher Scientific), while the anti-STX4 and anti-SCAMP3 coated beads were made using a bead conjugation kit (Dynabeads Antibody Coupling Kit, Thermo Fisher Scientific) according to manufacturer’s instructions. Beads were washed with PBS and were then incubated with 15 μg of EVs overnight at 4 °C. After incubation, samples were washed 3 times with PBS containing 1% EV-depleted FBS followed by 15 minutes incubation with human IgG antibody at 4 °C. After another three washes, the samples were incubated for 40 minutes with primary antibodies against either CD63 (PE Mouse Anti-Human CD63, BD Pharmingen), CD81 (PE Mouse Anti-Human CD81, BD Pharmingen), STX4, or SCAMP3 diluted in PBS containing 1% EV-depleted FBS. Samples were washed and incubated for 20 minutes with Alexa 488 conjugated secondary antibodies for STX4 and SCAMP3 after which another wash was performed. Samples were run in a FACSAria (BD Pharmingen) and results were analyzed using the FlowJo software (Tri Star).
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4

Multiparametric Basophil Activation Assay

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The following reagents were used for flow cytometry and microscopy staining; Avidin Alexa Fluor TM 488 (ThermoFisher Scientific), APC mouse anti-human CD203c (Clone NP4D6, BD Biosciences), PE mouse anti-human CD63 (Clone H5C6, BD Pharmingen TM ), Alexa Fluor TM 647 mouse anti-human CD63 (Clone H5C6, BD Pharmingen TM ), mouse anti-human IgE labeled with Alexa Fluor 405 NHS Ester (Clone GE-1, Sigma Aldrich GmBH) using the procedure described by Life Technologies.
The reagents used for stimulation of basophils were mouse anti-human IgE (Clone G7-18, BD Pharmingen TM ), recombinant human interleukin (IL)-3 (Peprotech), N-Formyl-Met-Leu-Phe (fMLP, Merck), recombinant major birch pollen allergen (rBet v 1, Biomay).
Buffers used were activation buffer ((Hank's balanced salt solution (Invitrogen) with 20 mM HEPES and 7.5% NaHCO3, pH 7.4)), BD FACS TM lysing solution 10x concentrate (BD Biosciences) and fixation buffer (Biolegend).
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