The specific small interference RNA (siRNA) targeting HCP5 (si-HCP5), miR-140-5p mimics and the scrambled oligonucleotides (NC) were obtained from GenePharma Co., Ltd (Shanghai, China). The full length sequence of human HCP5 cDNA was amplified by PCR, and then subcloned into the vector pcDNA3.1 (Invitrogen, Carlsbad, CA, USA). Cells grown at 70–80% confluence were transfected with the oligonucleotides and vectors using Lipofectamine 2000 (Invitrogen). After 48 hrs, the cells were collected for further experiments.
Scrambled oligonucleotides nc
Scrambled oligonucleotides (NC) are synthetic DNA or RNA sequences that do not target any known gene or transcript. They are commonly used as negative control reagents in experiments involving gene expression analysis or gene silencing techniques.
Lab products found in correlation
4 protocols using scrambled oligonucleotides nc
Cell culture and transfection of OSCC
The specific small interference RNA (siRNA) targeting HCP5 (si-HCP5), miR-140-5p mimics and the scrambled oligonucleotides (NC) were obtained from GenePharma Co., Ltd (Shanghai, China). The full length sequence of human HCP5 cDNA was amplified by PCR, and then subcloned into the vector pcDNA3.1 (Invitrogen, Carlsbad, CA, USA). Cells grown at 70–80% confluence were transfected with the oligonucleotides and vectors using Lipofectamine 2000 (Invitrogen). After 48 hrs, the cells were collected for further experiments.
Targeting TTN-AS1 with siRNA
TMPO-AS1 Regulation in Gastric Cancer Cells
si-TMPO-AS1, pcDNA3.1-TMPO-AS1, miR-140-5p mimics, the scrambled oligonucleotides (NC) and empty pcDNA3.1 vector were obtained from Shanghai GenePharma Co., Ltd. (Shanghai, China). To perform transfection, cells were cultured to about 70–80% confluence. Then, Lipofectamine 3000 Transfection Reagent (Invitrogen) was used. After 48 h, the transfection efficiency was validated by RT-qPCR analysis.
Lentiviral Knockdown and Overexpression of XIST and EZH2
The miR-101 mimic, miR-101 inhibitor and negative control (miR-NC) were obtained from Ribobio (Guangzhou, China). To restore EZH2 expression, a pcDNA3.1-EZH2 plasmid, which contained the coding sequences but lacked the 3'-UTR of EZH2 was constructed. The cell transfection was performed with Lipofectamine2000 according to the manufacturer's instructions. Briefly, cells were placed in a 6-well plate the day before transfection. At 48h after transfection, cells were collected for subsequent analysis or subjected to qRT-PCR and western blot assays to confirm the transfection efficiency.
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