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5 protocols using ifn γ apc xmg1

1

Multiparametric T Cell Analysis

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Analyses were performed using the following antibodies: CD3-FITC (145-2C11, Biolegend), CD4-BV750 (GK1.5, Biolegend), CD8-BV786 (53-6.7, Biolegend), CD62L-BV510 (MEL-14, Biolegend), CD44-PE/Cy5 (IM7, Biolegend), CD107a-BV711 (1D4B, Biolegend), CD154-PE (MR1, BD), Gmzb-AF700 (QA16A02, Biolegend), IFN-γ-APC (XMG1.2, Biolegend) and TNF-α-BB700 (MP6-XT22, BD). In brief, splenocytes isolated from experimental mice were cultured in the presence of phorbol 12-myristate 13-acetate (PMA) (1.9 nM) and ionomycin (0.08 mg/ml) solution at 37°C for 4 h. After washing, 2 × 106 cells were stained with FVS780 (viability dye) followed by treatment with antibodies for surface antigens (Anti-CD3, CD4, CD8, CD62L, CD44, CD107a, and CD154) at 4°C for 30 min. After washing, cells were fixed and permeabilized with BD Cytofix/Cytoperm, and then stained with the antibodies against the intracellular antigens (Gzmb, IFN-γ, and TNF-α) for 20 min at 22°C. Stained cells were separated using a BD FACSymphony™ Cell Analyzer and one million events were collected for each sample. The analysis was performed in FlowJo software version 10.6.2.
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2

Multiparameter Flow Cytometry Immunophenotyping

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The following antibodies were used: CD11b-APC-Cy7 (M1/70), CD19-Biotin (6D5), TCRβ-Biotin (H57-597), NK1.1-Biotin (PK136), Ly6C-BV570 (HK1.4), Ly6G-PerCp-Cy5.5 (1A8), and TCRβ-Pacific Blue (H57-597) from Biolegend (San Diego, CA) CD8α-PE-Cy7 (53-6.7), CD4-Alexa 700 (RM4-5), and CD19-FITC (1D3) from BD Pharmingen (San Diego, CA); CD49b (DX5) from eBioscience (San Diego, CA) and MHC-II-Biotin (produced in house from hybridoma M5/114). The secondary Streptavidin-PE-CF594 from BD Horizon was used with biotin-conjugated primary antibodies. Antibody for detection of intracellular IFN-γ was IFN-γ-APC (XMG1.2) and the isotype control was Rat IgG1, κ-APC (RTK2071) (both from Biolegend). PE-labeled CD1d-tetramers loaded with α-galactosyl ceramide (αGalCer) (PBS57) were provided by the NIH Tetramer Facility and used to detect NKT cells.
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3

Multiparametric Flow Cytometry of Immune Cells

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Cells were washed with FACS buffer (HBSS (Corning, without Calcium, Magnesium and Phenol Red) containing 0.2% BSA (Sigma A3059)and 0.05% Azide(Sigma S2002)), treated with anti-FcR (24G2, Leino C381), and then stained with specific antibodies at 4 °C for 30 min. We use anti–mouse CD4-FITC (RM4-4, Biolegend 100510), CD4-BV785(RM4-4, Biolegend 100552), CD8α-PE-Cy7 (53-6.7, Biolegend 100722), B220-AF594 (RA3-6B2, Biolegend 103254), CD11c-PE (N418, Biolegend 117308), MHCII-BV421 (M5/114.15.2, Biolegend 107632), CD40-APC (3/23, Biolegend 124612), IFN-γ-APC (XMG1.2, Biolegend 505810), anti-IL17A-BV785 (TC11-18H10.1, Biolegend 506928), GM-CSF-PE (MP1-22E9, Biolegend 505406) antibodies were purchased from Biolegend. For intracellular cytokine staining, mononuclear cells from LNs and CNS were stimulated overnight with rhMOG (10μg/ml), with monensin (Biolegend 420701) added in the last four hours, and cells were fixed and permeabilized with the BD Fix/Perm kit (BD 554715) according to the manufacturer’s instructions and then stained with intracellular antibodies for 30 min. Dead cells were excluded using Zombie Aqua™ Fixable Viability Kit (Biolegend 423102). Data were collected with a FACS LSR II or FACS Fortessa flow cytometer (BD Biosciences) and analyzed with FlowJo software.
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4

Multicolor Flow Cytometry Panel for Murine Cells

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Murine cells were blocked with rat anti-mouse CD16/32 (0.5 μg per well, eBioscience) and stained with respective antibodies at diluations according to manufacturers’ protocols: CD45-BV510 (30-F11, BioLegend), CD4–antigen-presenting cell (APC), CD4-BV510 (both RM4–5, BioLegend), CD8-Percp-Cy5.5 (53–7.7, eBioscience), CD3-FITC, CD3-BV421 (both 17A2, BioLegend), IFNγ-PE, IFNγ-APC (XMG1.2, BioLegend), HLA-A2-APC (BB7.2, BioLegend), HLA-DR-Percp eFl710 (L243, BioLegend), Ly6C-APC (KK1.4, BioLegend), CD11B-PE-Dazzle 594 (M1/70, BioLegend), Cxcl9-PE (MIG-2F5.5, BioLegend), I-A/I-E-AF700 (M5/114.15.2, BioLegend), CD11C-BV785 (N418, BioLegend). eFluor 780 fixable viability dye (eBioscience) was used according to manufacturer's protocol to exclude dead cells. For intracellular staining, cells were incubated at 37°C with 5 μg/mL Brefeldin A (Sigma) and respective stimulus (10 μg/mL for peptides, see also Elispot section) for 4 to 6 hours. Intracellular staining was performed using eBioscience Intracellular Fixation & Permeabilization Buffer Set for cytokines according to manufacturer's protocol. Nonfixed samples were acquired immediately, and fixed samples were acquired within 48 hours on a FACS Canto II (BD Biosciences) or a BD AriaII.
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5

Multiparametric Phenotyping of CD8+ T Cells

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Gp33‐41 peptide (KAVYNFATM) and gp61‐80 (GLNGPDIYKGVYQFKSVEFD) peptides were purchased from Mimotopes. PE‐conjugated gp33‐MHC class I tetramer (H‐2Db/gp33‐41) was kindly provided by the NIH tetramer core facility. For exclusion of dead cells, efluor780 (eBioscience) or ZombieAqua (BioLegend) was used. Antibodies used were as follows: PD‐1‐FITC (J43; Thermo Fisher Scientific), HVEM‐APC (LH1; eBioscience), CD19‐APC‐Cy7 (6D5; BioLegend), CD4‐PE (RM4‐5; BD Bioscience), CD4‐PerCP‐Cy5.5 (RM4‐5; BioLegend), CD8a‐FITC (53‐6.7, eBioscience), CD8a‐PE‐Cy7 (53‐6.7; BioLegend), CD8a‐APC‐Cy7 (53‐6.7; BioLegend), CD8a‐PE (53‐6.7; BD Bioscience), IFNγ‐APC (XMG1.2; BioLegend), CD127‐APC (SB/199; BioLegend), CD25‐PE (PC61; eBioscience), Ki‐67‐PE (16A8; BioLegend), KLRG‐1‐PerCP‐eFluor710 (2F1; eBioscience), CD62L‐BV421 (MEL‐14; BioLegend), CD45.1‐PerCP‐Cy5.5 (A20; BioLegend), TNFα‐PE (MP6‐XT22; BD Bioscience), and TNFα‐FITC (MP6‐XT22; BioLegend).
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