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43 protocols using anti cd56 pe

1

Comprehensive Immune Monitoring After Allogeneic Stem Cell Transplantation

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CMV serostatus was assessed in all patients and donors before alloSCT. After transplant CMV was monitored routinely by PCR on peripheral blood samples in all patients. Absolute numbers of circulating total (CD3+), CD4+CD8- and CD4-CD8+ T-cells, B cells and NK cells were measured routinely at predefined timepoints on anticoagulated fresh venous blood by flow cytometry with bead calibration (Trucount tubes, BD Biosciences). Samples were measured either on a FACSCalibur using anti-CD3-APC, anti-CD4-FITC, anti-CD8-PE, and anti-CD45-PerCP or with anti-CD3-FITC, anti-CD16-PE, anti-CD19-APC, anti-CD45-PerCP, and anti-CD56-PE, or on a FACSCanto using anti-CD3-APC, anti-CD4-PB, anti-CD8-FITC, anti-CD16-PE, anti-CD19-PE Cy7, anti-CD45-PerCP, and anti-CD56-PE (all from BD). The lower detection limit was 0.5x106 cells/L.
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2

Lymphocyte Subpopulation Analysis

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Percentages of CD3CD16+CD56+CD28+, CD3+CD16+CD56 CD28+, CD3+CD8+CD28+, CD3+CD8+CD28 subpopulations were analyzed according to cell surface staining instructions using anti-CD3 APC, anti-CD8 PE, anti-CD16 PE, anti-CD56 PE, and anti-CD28 FITC moAb (Becton Dickinson, USA) in heparinized blood samples. CD28 percentages on gated NK and NKT cells were analyzed with Flow-Jo software version 8.8.9 (Treestar, USA). T cytotoxic cells were given as CD8+CD28+ percentages on CD3+ gated cells.
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3

Characterizing NK-CD4+ T Cell Interactions

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CD4+ T cells and NK cells were isolated from cryopreserved PBMCs of healthy donors by commercial kits (MagniSort Human CD4+ T Cell Enrichment; Affymetrix, and MagniSort™ Human NK cell Enrichment; eBioscience). CD4+ T cells were coated with 1 μg of recombinant gp120 protein during 1 h at RT. After extensive washes, CD4+ T cells were mixed with NK cells in a 1:1 ratio and stained with anti-CD56 (PE; Becton Dickinson) and anti-CD3 (PE-Cy7; Becton Dickinson) antibodies for detection of NK cells and CD4 T cells, respectively. After washing, we added naked AuNPs or BiAb-AuNPs at two different doses (2.5 μg/ml and 10 μg/ml of total antibody). After 20 min incubation at RT, cells were washed and fixed with PFA (2%). Samples were then acquired on a LSR Fortessa flow cytometer (Becton Dickinson) and data were analyzed using FlowJo V10 software.
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4

Characterization of NPM1-mutant CTL Phenotype

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NPM1mut-specific CTL products were characterized for phenotype by monoclonal antibody staining and flow cytometry. Anti-CD3 FITC, anti-CD4 PE, anti-HLA-DR PE, anti-CD8 APC, CDγδ FITC, anti-CD56 Pc5.5, anti-CD14 FITC, anti-CD56 PE, anti-CD3 Pc5.5, anti-CD19+ CD20 APC, anti-CCR7 FITC, and anti-CD45RA PE (Becton Dickinson, Franklin Lakes, NJ, USA) were employed.
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5

Natural Killer Cell Quantification

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Peripheral blood natural killer (CD3 -CD56 + ) cell counts were obtained by flow cytometry using FACSCalibur TM (Becton Dickinson Biosciences, CA, USA). We used the Anti-CD3 FITC (Becton Dickinson Biosciences, CA, USA) and Anti-CD56 PE (Becton Dickinson Biosciences, CA, USA).
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6

Cytokine Production and Lymphocyte Phenotyping

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Isolated PBMCs (106/mL/well) were stimulated with 5 ng phorbol 12-myristate 13-acetate, 500 ng ionomycin, and 10 units of human recombinant interleukin (IL)-2 in 24-well plate for 72 hr at 37°C in a 5% CO2 incubator. Cytokine production was measured from the culture supernatant. Phenotyping of lymphocyte subpopulation was done using Four-color flow cytometry (BD Accuri™ C6 Plus, San Jose, USA). Anti-CD3 FITC, anti-CD19 PE, and anti-CD56 PE (BD Pharmingen, San Jose, USA) were used to phenotype T cell, B cell, and natural killer (NK) cell populations. T cell phenotyping for helper, cytotoxic, and NKT cell was done with anti-CD4 PerCP, anti-CD8 PE, and anti-CD16 PerCP-Cy™5.5 (BD Pharmingen, San Jose, USA). Each fluorescence conjugated isotypes control was used for subtracting the non-specific background binding of fluorescent antibodies.
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7

Characterizing MICA, NKG2D, and DNAM-1 expression in multiple myeloma

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Analysis of MICA expression on patient-derived PCs was performed by gating the CD38+CD138+ PC population using the antibodies anti-MICA (clone 159227, R&D Systems, Minneapolis, MN, USA), anti-CD38/APC, and anti-CD138/FITC (both from BD Bioscience, San Jose, CA, USA) as previously reported (16 (link)); samples were acquired using a FACSCanto (BD Biosciences, San Jose, CA, USA) and a FACSCalibur (Becton Dickinson). Analysis of NKG2D and DNAM-1 on NK cells from PBMCs or BM aspirates was performed by gating on the CD45+CD138CD3CD56+ population using the antibodies anti-CD3/allophycocyanin-H7, anti-CD56/PE, anti-CD138/FITC, anti-CD45/PE-Cy7, anti-NKG2D/APC, or anti-DNAM-1/APC (BD Bioscience). In some experiments, anti-CD16/PerCP mAb was also used (BD Bioscience). In the experiments relative to Figure 4 and Figure S2 in Supplementary Material, all the patients-derived samples were acquired using a FACSCanto (BD Biosciences, San Jose, CA, USA). In the experiments relative to Figure 5, PBMCs derived from healthy donors were incubated with medium alone or serum derived from MGUS or MM patients for 16 h. After harvesting, cells were stained with antibodies from BD Bioscience: anti-CD3/PerCP, anti-CD56/APC, and anti-NKG2D/PE; samples were acquired using a FACSCalibur (Becton Dickinson).
Data analysis was performed using the FlowJo 9.3.2 program (TreeStar, Ashland, OR, USA).
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8

Flow Cytometric Analysis of Immune Cells

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This was undertaken according to our previously published methods (33 (link)). The method utilized whole blood analysis with red cell lysis using Easylyse (BD Biosciences) and with anti-CD56 PE, anti-CD16 FITC, anti-CD3 PE Cy5 and anti-CD69 APC (all supplied by BD Pharmingen). Flow cytometric analysis was undertaken on a Facscalibur (BD Biosciences), and using Cellquest Pro software. A minimum number of 10,000 cells were counted.
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9

Comprehensive Immune Cell Profiling

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PBMCs, LNs, and tumor cell suspensions at 0.5x106 cells/sample were washed in PBS containing 2% FCS and 0.05% NaN3 (FACS-buffer). To investigate lymphocyte subtypes and their functions, staining was performed with fluorophore-conjugated antibodies: Blue Live/Dead stain, anti-CD4 Pacific-Blue, anti-CD8 APC, anti-CD19 APC-Cy7, and anti-CD56 PE (Becton Dickinson-BD, Franklin Lakes, NJ, USA). Cells were investigated with LSRFORTESSA (BD) and analyzed by using the FACS DIVA software (BD).
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10

Immunophenotyping of PBMC Samples

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Peripheral blood mononuclear cells (PBMC) were isolated by centrifugation through Ficoll-Hypaque of blood samples obtained at the time of allograft biopsy, and stored at—80°C until analyzed. After thawing, 0.5–1 X 106 PBMC were incubated with various antibody combinations for 30 min at 4°C. The fluorochrome-conjugated monoclonal antibodies used were anti-CD19 V500, anti-CD3 V450, anti-CD56 PE, anti-CD14 PE-Cy7, anti-CD45 APC, anti-CD38 PE-Cy7 from BD Biosciences, anti-CD24 APC from Miltenyi Biotec and anti-IgD FITC and anti-CD27 PE from Beckman Coulter. Samples were analyzed with Canto II cytometer (BD Biosciences) and the data were processed using FlowJo software (Tree Star, Ashland, USA).
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