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Zorbax xdb c18 column

Manufactured by Agilent Technologies
Sourced in United States, Germany

The Zorbax XDB-C18 column is a high-performance liquid chromatography (HPLC) column designed for reversed-phase separations. It features a silica-based stationary phase with a C18 bonded ligand, providing excellent peak resolution and reproducibility for a wide range of analytes.

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34 protocols using zorbax xdb c18 column

1

Quantifying 5-Methylcytosine in Wheat Genome

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The content of 5-methyl cytosine (5mC) in wheat genome was detected with HPLC as the method used by Duan et al.40 . In this study, after about 10 μg genomic DNA was hydrolyzed with DNase I, nuclease P1 and alkaline phosphatase, was filtered with 0.45 μm microporous membrane and was detected with HPLC.
In this study, these conditions of HPLC were as follows, mobile phase was composed of 50 mM KH2PO4 and 8% methanol with pH 3.7 and 0.4 ml/min velocity, analytical column was Agilent C18 Zorbax XDB column (4.6 ×150 mm, 5 μm particle size), column temperature was 30 °C. Furthermore, according to the retention time of C and 5mC, non-methylated cytosine (C) and methylated cytosine (5mC) in genomic DNA could be detected with UV detector, detection wavelength was 285 nm, and the retention time of C and 5mC in genomic DNA of wheat seedlings was respectively 6.061 min and 6.896 min. In order to guarantee the reliability of experimental data, the precision, repeatability and stability of HPLC were tested, and the assay of 5mC content in genomic DNA of wheat seedlings was repeated three times.
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2

HPLC Analysis of 5-Methylcytosine in Rehmannia

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The 5-methyl cytosine (5mC) content in R. glutinosa was detected by high-performance liquid chromatography (HPLC; Li J. Y. et al., 2020 (link)). After genomic DNA was hydrolyzed in order with DNase I, nuclease P1, and alkaline phosphatase, this digestion system was centrifuged for 5 min at 12,000 rpm. The supernatant was filtered with 0.45 μM organic microfiltration membrane, and 5mC content was determined by HPLC.
These chromatography conditions performed in this study were as follows: The mobile phase was composed of 50 mM KH2PO4 and 8% methanol (92:8) with 0.5 ml/min flow velocity, and the analytical column was Agilent C18 Zorbax XDB column (4.6 × 150 mm, 5 μm particle size). Furthermore, non-methylated cytosines (C) and 5mC in genomic DNA could be detected at 285 nm according to the retention time of C and 5mC.
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3

Quantitative LC-MS/MS Analysis of Adriamycin

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ADM treated MG63, MG63/DOX, and GSF-0686 cells were collected at different time points. The cell lysates and the cell culture media were subjected to LC-MS/MS analysis. Non-treated cells were used as control. The conditions of liquid chromatography were as follows: Zorbax XDB-C18 column (2.1 mm × 150 mm i.d., 3.5 μm) (Agilent Co., MA, USA), the mobile phase A (0.1% formic acid, contained 5 mM Ammonium formate) and the mobile phase B (acetonitrile, flow rate was 1.0 ml/min, 35). The positive electrospray ionization (ESI) was performed under ion multiple reaction monitored (MRM) mode. The precursor-to-product ion transitions of m/z 544.2 → 397.2 and m/z 528.2 → 321.3 were used to measure and quantify ADM. 1 mg/ml ADM was used as standard, while 100 μg/ml daunorubicin (DNR) as internal control.
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4

HPLC Analysis of Bioactive Compounds

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The HPLC system was an Agilent 1200 Series, consisting of a G1310A binary pump, a G1329A auto sampler, a G1322A degasser, and a G1315D photo-diode array detector controlled by ChemStation software (Agilent v. 03.02; all from Agilent Technologies Inc., Santa Clara, CA, USA). The chromatography was conducted using a Zorbax XDB C18 column (4.6 × 250 mm, 5 µm) (Agilent Technologies, Santa Clara, CA, USA) and a guard column Eclipse XDB-C18 (4.6 × 12.5 mm, 5 µm) (Agilent Technologies, Santa Clara, CA, USA). The mobile phase consisted of 5 mM Na2HPO4 (solvent A, pH adjusted to 6 with H3PO4) and methanol (solvent B). The eluent profile was a 0–26 min linear gradient A: B from 86:14 to 14:86, 26–30 min isocratic elution with 14:86, 30–35 min linear gradient from 14:86 to 86:14, 35–37 min isocratic elution with 86:14. The injection volumes and flow rate were 30 μL and 1.5 mL/min, respectively. Each replicate was injected twice (Pan et al., 2012). UV-spectra of all peaks were collected (220–320 nm) and chromatograms were recorded at 220, 254, 280, 306, and 320 nm.
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5

Quantitative Cholesterol Lipid Analysis

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Before lipid extraction, all samples were spiked with 5 μg of the internal standard cholesterol‐d7 (Avanti Polar Lipids). Lipids were extracted twice in a 1:10 ratio with methyl tert‐butyl ether (VWR). Extracted lipids were dried down and resuspended in high‐performance liquid chromatography grade methanol (Caledon Laboratory Chemicals). Samples were analyzed by liquid chromatography/tandem mass spectrometry with a 6410 Triple Quadropole liquid chromatography/tandem mass spectrometry instrument using an electrospray ionization source and Zorbax XDB‐C18 column (4.6×50 mm, 3.5 μm) (Agilent Technologies). Sample acquisition was performed in multiple reaction monitoring mode using transitions for cholesterol (m/z 404→369) and the internal standard cholesterol‐d7 (m/z 411→376).
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6

Endogenous Hormones and Carbohydrates Analysis

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According to the seed germination trial, seeds with 0, 20, and 50 days of stratification were used for sugar and hormone extraction and determination. Endogenous hormones, including ABA, GA3, and IAA, were extracted according to Wang et al. [76 (link)]. Hormonal quantification was carried out using high-performance liquid chromatography–electrospray ionization–mass spectrometry (HPLC-ESI-MS, Agilent 1200 UHPLC/6460 QQQ, Santa Clara, CA, USA). High-performance liquid chromatography was performed with an Agilent Zorbax XDB C18 column (150 mm × 2.1 mm × 3.5 μm). The mobile phases and gradient were as follows: mobile phase A, 0.1% (v/v) formic acid; mobile phase B, methanol. The flow rate was set to 0.3 mL/min. The gradient program was as follows: 60% A and 40% B for 1.5 min; 100% B for 6.5 min; and then 60% A and 40% B for 5 min. The content of ABA, GA3m and IAA was determined using the external standard method and is expressed as ng/g FW. The starch content was measured by the dinitrosalicylic acid (DNS) method described by Jeong et al. [77 (link)]; and soluble sugars, including sucrose, glucose, and fructose, were measured as described by Miao et al. [78 (link)].
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7

Quantitative HPLC Analysis of Nitrile Substrates

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The decrease in nitrile substrates and formation of acid and amide products were quanti ed by reversedphase high-performance liquid chromatography (HPLC) analysis. For aromatic and arylacetonitriles, a column of Zorbax SB-Aq (250 mm × 4.6 mm, 5 µm; Agilent Technologies, Ltd., USA) was used, and the eluting solvent system was methanol: water: TFA, 30: 70: 0.01 ( ow rate: 0.9 ml/min; 30°C). For heterocyclic nitriles, a Zorbax XDB-C18 column (4.6 mm × 250 mm, 5 µm; Agilent Technologies, Ltd., USA) was used with a mobile phase consisting of phosphoric acid (0.1%, v/v) and acetonitrile (75:25, v/v) at a ow rate of 1 mL/min. The eluate was monitored at a UV wavelength of 210 nm (230 nm for benzonitrile substrate).
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8

Crude Extract Analysis by HPLC-QTOF-MS

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Crude extracts were analyzed using mass spectroscopy on an Agilent HPLC System 1290. An Agilent Zorbax XDB-C18 column with a narrow bore of 3.5 μm, a thickness, and a size of 2.1 × 150 mm, was used for reverse phase (RP) chromatography. The column temperature was maintained at 25°C. The UV-Vis variable UV detector used a variable wavelength of 220 nm for detection. A 0.5 ml/min elution gradient was used. Solvent A (0.1% formic acid in water) and Solvent B (0.1% formic acid in methanol) made up the elution gradient (MeOH). The gradient was initially established at 95% solvent A and 5% solvent B at 0 min. Then, over 25 min, it was linearly changed to 100% solvent B with 5% solvent A. For the following 5 min, this composition remained unchanged. A quadrupole (Time of Flight) TOF mass spectrometer was connected to the LC system (Agilent 6520 Accurate-Mass Q-TOF mass spectrometer with dual ESI source). The LCMS system captured real-time mass spectrometer data (spectrogram). The tuning parameters were set as shown in Table 1.
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9

HPLC Analysis of Microbial Metabolites

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An Agilent 1200 series HPLC instrument equipped with different columns and a reflective index detector was used to determine the concentrations of octyl glucoside, glucose, fructose, sucrose and fermentation products in the E. coli sample every 24 h. One milliliter of liquid cultures was sampled at 24 h and 48 h and centrifuged at 17,000 × g for 15 min to separate the aqueous and hexadecane layers. The supernatant was transferred into a 2-mL HPLC vial. For octyl glucoside detection, samples (20 μL) were analyzed with a Zorbax XDB-C18 column (Agilent). The flow rate was set at 1 mL/min with a column temperature of 30 °C (20 ). For the analysis of sugars (glucose, sucrose, and fructose) from samples supplemented with sucrose, an Aminex HPX-87P column (Bio-Rad) was used to analyze the samples (20 μL) with the flow rate of 0.6 mL/min, and the column temperature was set at 85 °C. For glucose and other fermentation products when sucrose was not supplemented, samples (100 μL) were analyzed with an Aminex HPX-87H column (Bio-Rad), and the flow rate and column temperature were set at 0.6 mL/min and 60 °C, respectively. Serial dilutions of glucose (Sigma-Aldrich), sucrose (Sigma-Aldrich), fructose (Sigma-Aldrich), sodium acetate (Sigma-Aldrich), sodium lactate (Sigma-Aldrich), and absolute ethanol (VWR) were used to determine the amounts of these compounds in the sample.
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10

HPLC Quantification Protocol for Analytes

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The Agilent 1200 series HPLC system was also used for quantification analysis. The chromatographic separation was also carried out on the ZORBAX XDB-C18 column (250 mm × 4.6 mm, 5 μm; Agilent, Santa Clara, CA, USA). The mobile phase was composed of acetonitrile (A) and 0.1% formic acid in water (B). The mobile phase was set as follows: 0–30 min, 13%–17% A; 30–32 min, 17%–22% A; 32–42 min, 22%–23% A; 42–45 min, 23%–26% A; and 45–60 min, 26%–30% A. The flow rate was 1.0 mL/min. The column temperature was maintained at 30 °C. The detection wavelength was 265 nm. The injection volume was 10 μL.
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