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416 protocols using bovine serum albumin (bsa)

1

Immunohistochemistry and Ultrastructural Analysis of Smooth Muscle

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We gently separated the smooth muscle from the mucosal layer using microscopic forceps. One part of muscularis propria was fixed in 0.1 M phosphate buffered saline containing 4% paraformaldehyde for 4 h at 4°C. After washing in PBS containing 5% BSA thrice, the muscular tissue of each group was blocked in blocking solution (PBS containing 0.3% Triton X-100 (Beyotime), 5% normal donkey serum (Beyotime), and 5% BSA (Sigma)) for 1 h at room temperature and then incubated at 4°C for 72 h with primary antibody. Table 3 shows the primary antibodies and secondary antibody staining. Secondary antibody staining was performed for 2 h. Subsequently, after washing three times with PBS containing 5% BSA, the nuclei were labeled with Beyotime’s DAPI for 5 min. For each sample, at least five fields were blindly evaluated. Another part of muscularis propria was fixed at 4°C in 0.1 M phosphate buffered 3% glutaraldehyde and postfixed in 1% osmium tetroxide in the same buffer. After fully rinsed in distilled water, the samples were dehydrated in graded acetone series and embedded in SPI-Pon812. Ultrathin sections were cut with a Leica EM UC7 ultramicrotome, and attached to copper grids with Formvar film, then stained with 2% uranyl acetate and Reynolds lead citrate and examined under a Hitachi HT7800 electron microscope at 80 kV.
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2

Immunocytochemistry of Rat Hepatic Stellate Cells

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Rat HSCs were inoculated into a petri dish containing coverslips and treated with or without TGF-β1. After cells were grown to a monolayer, the coverslips were removed and washed twice with 1X PBS. The cells were fixed with 4% paraformaldehyde for 10 min at room temperature, after which the slides were washed with 1X PBS for 5 min and the cells were permeabilized with 0.5% Triton for 15 min at room temperature. The slides were then washed twice with 1X PBS for 5 min each, blocked with 1% BSA (Beyotime Institute of Biotechnology) solution for 30 min at room temperature and incubated with the primary antibody diluted with 1% BSA solution at 37°C for 2 h. Subsequently, the slides were incubated with Alexa Fluor 488-labeled goat anti-rabbit secondary antibody (cat. no. bs-0295G-AF488; BIOSS) diluted with 1% BSA solution at 37°C for 1 h, washed twice with 1X PBS for 5 min each time and stained with a 5% DAPI solution at room temperature for 2 min. Subsequently, the slides were mounted with an anti-quenching sealer and visualized under a fluorescence microscope (magnification, ×200).
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3

Immunofluorescent Staining of Cells

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Cells growing on coverslips were fixed for ten minutes at room temperature using a 3.7% formaldehyde solution. The cells were permeabilized with PBS containing 0.1% Triton X-100 (Beyotime) and then blocked with PBS containing 5% BSA (Beyotime). The cells were incubated overnight at 4°C with antibodies diluted in PBS containing 3% BSA, followed by 1 hour of detection with Alexa Fluor 488-conjugated secondary antibody (Beyotime). Nuclei were identified by DAPI (Beyotime) for 3 minutes.
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4

Immunofluorescence Assay for Ki-67 Expression

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Cells (1×106 cells/well) were plated in 6-well plates and after they had adhered, 4% paraformaldehyde was used to fix the cells at 4°C for 24 h. Subsequently, 0.5% Triton X-100 (Beyotime Institute of Biotechnology) was used to permeabilize the cells and 5% BSA (Beyotime Institute of Biotechnology) was used to block non-specific binding at room temperature for 1 h. A primary antibody was diluted with 5% BSA and incubated with the cells at 4°C overnight. The primary antibody used was an anti-Ki-67 (1:200; product code ab16667; Abcam). Next, the cells were incubated at 37°C for 1.5 h with the goat polyclonal secondary antibody to Rabbit IgG (heavy chain and light chain) Alexa Fluor® 488 (1:3,000; cat. no. ab150077; Abcam) in a dark room for 1.5 h. Finally, the nucleus of these cells was stained with 1 mg DAPI for 10 min at room temperature (Invitrogen; Thermo Fisher Scientific, Inc.). The fluorescence was observed using a laser scanning confocal microscope (magnification, ×200; Olympus Corporation).
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5

Protein Extraction and Western Blot Protocol

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RIPA buffer (Beyotime, China) was used for the collection of protein samples. BCA (Beyotime, China) was used for the determination of the concentration of these protein samples. Next, SDS-PAGE gel (Beyotime, China) was used for the separation of these proteins. And the PVDF membranes (Millipore, USA) were used for the adsorption of these proteins. Next, these membranes were blocked with the BSA (Beyotime, China) for 2 h. After that, the primary antibodies were incubated with these membranes at 4°C overnight. The primary antibodies applied in this were MTBP (ABCAm, ab115529), ZEB2 (ABCAm, ab138222), CD44 (ABCAm, ab51037), CD133 (ABCAm, ab222782) and β-actin (ABCAm, ab8227). All these primary antibodies were diluted with the BSA (Beyotime, China) with the ratio (1:1000). These membranes were incubated with the second antibodies for 2 h in the second day. The second antibodies were also diluted with the BSA with the ratio (1:2000). Finally, immunoreactive signals were determined with the Pierce Western Blotting Substrate (Millipore, USA). The bands were quantified with the ImageJ software (National Institutes of Health, USA).
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6

Western Blot Analysis of VMP1 in LN299 Cells

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Briefly, LN299 cells were treated with RIPA buffer (cat #P0013B; Beyotime Biotechnology) containing protease inhibitors (cat #78425; Thermo Fisher, Waltham, MA, USA). After 10 min of incubation on ice, lysates were centrifuged at 15,000 rpm for 10 min at 4 °C to obtain the supernatant. The concentration of protein was determined using the BCA Assay Kit (cat #P0010S, Beyotime Biotechnology), and 20 μg of protein sample was separated via SDS-PAGE and blotted onto a polyvinylidene fluoride (PDVF, cat #FFP33, Beyotime Biotechnology) membrane. The PVDF membrane was then blocked with 5% bovine serum albumin (cat #ST023, Beyotime Biotechnology) in Tris-buffered saline with Tween-20 (TBST) for 1 h at room temperature and incubated with a VMP1 primary antibody (1:2000; cat #12978S, Cell Signaling Technology) at 4 °C overnight. On the next day, the PVDF membrane was incubated with the HRP-conjugated antibody (1:3000; cat #7074S, Cell Signaling Technology) for 2 h and washed three times with TBST. The bands were then visualized using a Bio-Rad system (Hercules, CA, USA) following the instructions.
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7

Immunohistochemical Staining of Cultured Cells

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Cells (2.5×105) were seeded into 24-well plates and covered by coverslips. Following the culturing of cells for 36 h and 7 days time intervals, they were removed and washed with PBS three times. Cells were subsequently fixed in 4% (w/v) cold paraformaldehyde at 4°C for 30 min, permeabilized in 0.5% (w/v) Triton X-100 at 37°C for 5 min and incubated in deionized water containing 3% (w/v) H2O2 at room temperature for 10 min. Cells were subsequently blocked using 5% bovine serum albumin (Beyotime Institute of Biotechnology, Jiangsu, China) at 37°C for 30 min. After rinsing with PBS, cells were incubated in anti-cytokeratin 18 primary antibody (1:400) buffer at 4°C overnight. Cells were incubated in an equal volume of PBS in the control group. After rinsing with PBS, cells were incubated in HRP conjugated polymer anti-rabbit IgG antibody (1:100) buffer at 37°C for 1.5 h. Subsequently, development using a concentrated DAB kit, rinsing, counterstaining using 0.1% hematoxylin at room temperature for 3 min, dehydration using ethanol, transparentization using xylol and mounting were performed in sequence. The coverslips were observed under an optical microscope (XDZ-103; Shanghai Tiancheng Medical Flow Technology Co., Ltd., Shanghai, China) with Image Analysis 11.0 software (Beijing Changheng Rongchuang Technology Co., Ltd., Beijing, China).
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8

Immunohistochemical Analysis of Tissue Samples

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Tissue samples were collected from each group for IHC analysis. The tissue sections were dewaxed and then treated with anhydrous ethanol for 3 min, 95% ethanol for 3 min, 85% ethanol for 3 min, 75% ethanol for 3 min and deionized water for 3 min. Antigen retrieval was performed using sodium citrate (pH 6.0) for 7 min under microwave heating, and the tissue sections were then blocked with 5% bovine serum albumin (Beyotime Biotechnology Shanghai, China) for 30 min at 37 °C. Tissue sections were incubated with the primary monoclonal antibody (mAb; 1:1000, prepared by our laboratory as described by Yang et al.) for 12 h at 4 °C [10 (link)], incubated with biotinylated goat anti-mouse secondary IgG (1:500; CWBIO, Beijing, China) for 1 h at 37 °C, stained with DAB (Beyotime Biotechnology Shanghai, China) for 5 min, stained with hematoxylin for 2 min, and examined under a light microscope (Nikon, EclipseE100, Japan).
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9

Western Blot Analysis of DHCR7 in Cervical Cancer

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Cervical cancer cells were cultured in RPMI 1640 medium (Gibco, Thermo Fisher Scientific, Inc., MA, USA) supplemented with 10% fetal bovine serum (FBS) (Gibco, Thermo Fisher Scientific, Inc., MA, USA). Cells were incubated at 37°C in a 5% CO2 humidified incubator. Protein lysis buffer (Beyotime, Shanghai, China) was used to extract the cell lysates and bicinchoninic acid (BCA) protein assay kit (Beyotime, Shanghai, China) was used to determine the protein concentration. The protein samples were resolved by SDS-PAGE and then transferred to a polyvinylidene fluoride membrane (EMD Millipore, MA, USA). 5% bovine serum albumin (Beyotime, Shanghai, China) was used to block the membranes. Rabbit anti-DHCR7 antibody (1 : 2000, Invitrogen) and rabbit anti-β-actin were used to react with the protein samples at 4°C overnight. Then, goat anti-rabbit antibody (1 : 1000, Beyotime, Shanghai, China) was used to incubate the membranes at room temperature for 1 h. ECL plus reagent (Beyotime, Shanghai, China) was used to detect the brands.
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10

Immunofluorescence Staining of α-SMA

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Cells were fixed in cold paraformaldehyde (4%) for 15 min, followed by permeabilization in Triton X-100 (0.5%) for 20 min. After blocking with 5% bovine serum albumin (Beyotime) for 1 h at 4°C, cells were sequentially incubated with anti-α-SMA antibody (1:200 dilution) overnight at 4°C and Alexa Fluor® 488-conjugated goat anti-mouse IgG antibody (Invitrogen) for 1 h at 4°C. Cells were then counterstained with Hoechst 33258 (1:2000 dilution; Beyotime) to locate the nuclei and mounted with anti-fade mounting media (Beyotime).
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