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10 protocols using anti human cd19

1

SARS-CoV-2 Memory B Cell Detection

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Detection of SARS-CoV-2-specific memory B cells (MBCs) by flow cytometry was as previously described.21 (link) In brief, for SARS-CoV-2 specific MBCs responses, biotinylated SARS-CoV-2 Spike RBD protein (40592-V08H2-B; Sino Biological, Beijing, China) was mixed with Streptavidin BV421 (405225; Biolegend, San Diego, CA, USA) at 4:1 molar ratio for 1 h at 4°C to obtain the antigen probe. According to the manufacturer’s instruction, peripheral blood mononuclear cells (PBMCs) were stained for 30 m at 4°C using antigen probe (1:33.3) and the following conjugated antibodies: antihuman CD3 (1:50) (300430; Biolegend), antihuman CD19 (1:50) (302212; Biolegend), antihuman CD21 (1:50) (354918; Biolegend), antihuman CD27 (1:50) (356406; Biolegend). After staining, cells were rewashed and resuspended in a 200ul FACS buffer. Samples were then evaluated by flow cytometry (CytoFLEX; Beckman Coulter, Brea, CA, USA) and analyzed using FlowJo (version 10.0.7r2; Treestar, Woodburn, OR, USA).
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2

Quantifying IL-10 in B Cells from ARDS PBMCs

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B cells from ARDS PBMCs were sorted using Human B cell Enrichment kit (Stemcell), and were incubated with sorted Tfr cells or non-Tfr Treg cells at 5/1 B/T ratio in the presence of 2 μg/mL SEB (Sigma). After 72 h, cells were incubated with anti-human CD19 (BioLegend), fixed and permeabilized using CytoFix/CytoPerm buffer (BD Biosciences), and incubated with anti-human IL-10 (BioLegend). Excess antibodies were removed by washing, and the samples were analyzed in the LSR system.
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3

SARS-CoV-2 Spike RBD Protein Binding Assay

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Streptavidin BV421 (405225; Biolegend, California, CA, USA) and biotinylated SARS-CoV-2 Spike RBD protein ((40592-V08H2-B; Sino Biological, Beijing, China) were incubated for 1 hour at 4°C to create the antigen probe. Peripheral blood mononuclear cells (PBMCs) were separated from heparinized blood base on the manufacturer’s recommendations using Histopaque density gradient centrifugation (10771, Sigma-Aldrich). After rinsing with FACS buffer (phosphate-buffered saline with 2% fetal bovine serum), staining was performed for 30 min at 4°C with an antigen probe (1:33.3) and the following binding antibodies: anti-human CD3 (300430, Biolegend), anti-human CD19 (302212, Biolegend), anti-human CD21 (354918, Biolegend), and anti-human CD27 (356406, Biolegend). These antibodies were added in 1:50 volume. After staining, cells were rinsed and resuspended in 150 µL FACS buffer. Subsequently, samples were evaluated using a flow cytometer (CytoFLEX, Beckman Coulter). FlowJo software version 10.0.7r2 was used for data analysis.
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4

Flow Cytometry Analysis of B-ALL and HUVEC

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After harvesting, B-ALL cells or HUVECs (0.1-1x106) were centrifuged at 500 g for 5 min at room temperature and resuspended in 100 µl PBS containing anti-human CD19 (#302206, 1:20 dilution, Biolegend, Inc.), anti-human CD49d (#304304, 1:20 dilution, Biolegend, Inc.) and anti-human CD29 (#303008, 1:20 dilution, Biolegend, Inc.) antibodies, alongside the isotype control mouse IgG1κ (Biolegend, Inc.). Following incubation at 4˚C for 30 min, cells were washed with 1 ml PBS and resuspended in 100 µl DAPI/PBS (0.1µg/ml) for 15 min at 4˚C for assessment using a flow cytometer (BD FACSCanto II, BD Biosciences). Flow cytometry data were analyzed from the viable cells in the DAPI-negative population, based on an isotype gating strategy using Flow Jo (version 10, BD Biosciences).
For apoptosis assay, B-ALL cells were treated for 48 h with either DMSO or AVA4746 25 µM, with or without VDL chemotherapy (vincristine 5 nM, dexamethasone 0.05 nM, L-asparaginase 2.5x10-3 IU/ml) in the presence or absence of OP9. Annexin V (#640947, 1:20; Biolegend, Inc.) and DAPI were used to stain the 1x106 cells for 15 min at room temperature (25˚C), in the dark.
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5

SARS-CoV-2 Spike Protein Antibody Detection

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The stained peripheral blood mononuclear cells were evaluated in the following procedure, using a Beckman flow cytometer (Beckman Coulter, Inc., California, USA). Antigen probe was obtained, and the biotinylated SARS-CoV-2 Spike RBD protein (40592-V08H2-B, Sino Biological, Beijing, China) was mixed with Streptavidin-BV421 (405225, Biolegend, California, USA) at a 4:1 molar ratio for 1 h. To obtain the peripheral blood mononuclear cells, density gradient centrifugation [Histopaque (10771, Sigma-Aldrich, St Louis, Missouri, USA)], cell cleaning (FACS, With 2% FBS), add antigen probes (1:33.3) and fluorescent-conjugated antibodies [anti-human IgG Fc (410722, Biolegend), anti-human IgM (314524, Biolegend) Antihuman CD3 (300430, Biolegend), anti-human CD19 (302212, Biolegend), anti-human CD21 (354918, Biolegend), anti-human CD27 (356406, Biolegend)] after being mixed and placed at 4°C, 30 min, conduct light-avoidance staining; Test sample (FACS buffer), Analyze the data [FlowJo software (V10.0.7)].
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6

Transcriptome Analysis of Immune Cell Subsets

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CD8 T, CD4 T and B cells were purified from PBMCs with EasySep Human positive or negative selection (STEMCELL Technologies, 17953, 17852 and 17954) according to the manufacturerʼs instructions. The cell purities were checked for over 95% with anti-human CD8 (BioLegend, 344721), anti-human CD4 (BioLegend, 317408), anti-human CD19 (BioLegend, 392504) and anti-human CD20 (BioLegend, 302326), respectively. Total RNA was isolated from CD8 T, CD4 T and B cells of three randomly selected young and old donors individually at baseline (before vaccination) and 7 days after the second vaccination dose by using TRIzol reagent (Invitrogen) (Supplementary Table 1). RNA purity was checked by the NanoPhotomerer spectrophotometer (IMPLEN), and integrity was assessed using the RNA Nano 6000 Assay Kit of the Bioanalyzer 2100 system (Agilent Technologies). Then, cDNA libraries were constructed using 0.1 µg of RNA per sample with the NEBNext UltraTM RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer’s recommendations; the libraries were sequenced on an Illumina NovaSeq platform; and 250-bp paired-end reads were generated.
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7

Multiparametric Flow Cytometry Profiling

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Cell suspensions were incubated for 20 min at 4 °C in PBS containing 1% FCS and 10 mM EDTA with the following antibodies: anti-mouse CD45, anti-mouse CD31, anti-mouse PDPN, anti-mouse CD21/CD35, anti-mouse SCA1, anti-mouse B220, anti-mouse CD4, anti-mouse CD8, anti-mouse CD19, anti-mouse CD38, anti-mouse GL7 and anti-mouse CD11b (all from BioLegend); anti-mouse CD157 and anti-human CD45 (both from BD Biosciences); anti-human PDPN and anti-human CD31 (both from Thermo Fisher Scientific); and anti-human EPCAM, anti-human CD14, anti-human CD3 and anti-human CD19 (all from BioLegend). LIVE/DEAD cell discrimination was performed either by using a fixable BV510 Dead Cell Staining Kit (Molecular Probes) before antibody staining or by adding 7-aminoactinomycin D (Calbiochem) before acquisition. Cells were acquired with an LSR Fortessa (BD Biosciences) and analyzed with the FlowJo (v.10) software (FlowJo LLC) according to established guidelines. Cell sorting was performed using a BD FACSMelody Cell Sorter and the FACSChorus (v.1.3) software (BD Biosciences).
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8

Immunophenotyping of Primary PCNSL Cells

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Primary PCNSL cells were collected and fixed in cold 2% paraformaldehyde for 15 min. The cells were then washed thrice with cold PBS. For CD19 and CD20 expression analysis, cells were blocked in Human Trustain FcX (BioLegend, #422302) at 37°C for 30 min and divided into blank, isotype, and detection tubes. Cells in the isotype tube were incubated with CD19 (Biolegend, #400161) and CD20 isotype antibodies (Biolegend, #400149), followed by incubation with anti-human CD19 (Biolegend, #302244) and anti-human CD20 (Biolegend, #302326) antibodies at room temperature for 30 min. Finally, cells were washed twice and resuspended in cold PBS. All the analyses were performed using Flowjo software (version 10.8.1, BD).
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9

SARS-CoV-2 Spike RBD Protein Binding Assay

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The stained peripheral blood mononuclear cells were tested by Beckman flow cytometry (Beckman Coulter, Inc., California, USA). The specific steps were as follows: first, we mixed the biotinylated SARS-CoV-2 spike RBD protein (40592-V08H2-B, Sino biological, Beijing, China) with streptavidin-BV421 (405225, Biolegend, California, USA) in a 4:1 mole ratio and leave for 1 h to get the antigen probe; second, peripheral blood mononuclear cells were obtained from whole heparinized blood; the density gradient centrifugation was performed by Histopaque (10771, Sigma–Aldrich, St Louis, Missouri, USA) and then cleaned by cytometric staining buffer (FACS, 2%FBS) cells, besides we added antigen probe (1:33.3), fluorescence-coupled antibody [anti-human IgG Fc (410722, Biolegend), anti-human IgM (314524, Anti-human) CD3 (300430, Biolegend), anti-human CD19 (302212, Biolegend), anti-human CD21 (354918, Biolegend), and anti-human CD27 (356406, Biolegend)] into the cells and dyed at 4°C for 30 min under dark condition. After being re-suspended with FACS buffer, the samples were tested on the machine. The data were analyzed by Flow Jo software (V10.0.7).
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10

Quantifying SARS-CoV-2 Spike Antibodies

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Biotinylated SARS-CoV-2 spike RBD protein (Sino Biological, 40592-V08H2-B) was mixed with streptavidin BV421 (Biolegend, 405225) at a 4:1 molar ratio for 1 hour at 4°C to generate the antigen probe. According to the manufacturer's instructions, peripheral blood mononuclear cells (PBMCs) were extracted from heparinized whole blood by density gradient centrifugation with Histopaque (Sigma–Aldrich, 10771). After rinsing with FACS buffer (PBS+2% FBS), PBMCs were stained at 4°C for 30 minutes with an antigen probe (1:33.3), and the subsequent conjugated antibodies, namely anti-human CD3 (300430, Biolegend, 1:50), anti-human CD19 (302212, Biolegend, 1:50), anti-human CD21 (354918, Biolegend, 1:50), and anti-human CD27 (356406, Biolegend, 1:50). FACS cells were resuspended in 200 µm of FACS buffer after staining. The samples were subjected to flow cytometric evaluation (Beckman Coulter, CytoFLEX) and FlowJo analysis (Treestar, 10.0.7r2).
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