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14 protocols using streptavidin poly hrp

1

Exosome Characterization by ELISA

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The following primary and secondary antibodies were used for exosome characterization by ELISA. Mouse monoclonal antibodies anti-human CD9 (cat. 555370), CD81 (cat. 555675), CD24 (cat. 555426), Caveolin 1 (cat. 610407) and Fibronectin (cat. 610077) were purchased from BD Biosciences, USA. Mouse monoclonal antibody anti-human TSPAN8 (cat. WH0007103M2) was purchased from Sigma-Aldrich (Milano, Italy). Mouse monoclonal antibodies anti-human CD133 (cat. MAB11331), PD-L1 (cat. MAB1561), CXCR4 (cat. MAB172), EpCAM (cat. MAB9601), Integrin α6 (cat. MAB1350), Integrin β4 (cat. MAB4060), CD44s (cat. MAB7045) and CD44v6 (cat. BBA13) was purchased from R&D System, Minneapolis, USA. Mouse monoclonal antibodies anti-human CD151 (cat. 271216) and Alix (cat. 53540) were purchased from Santa Cruz Biotechnology. Rab5b polyclonal rabbit antibody anti-human (cat. HBM-RAB5-PR1, Hansa BioMed Life Sciences Ltd and cat. 598, Santa Cruz Biotechnology) was used for plate coating. Goat anti-mouse biotin conjugated antibody (cat. A16076, Thermo Fisher Scientific) was used as secondary antibody. Streptavidin Poly-HRP (cat. 21140, Thermo Fisher Scientific) is used to amplify the signal.
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2

Quantitative Protein-Aptamer Binding Assay

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High-binding, 384-well plates (Corning 3577) were coated with 50 µL of 50 nM protein overnight at 4 °C in 50 mM carbonate-bicarbonate buffer, pH 9.6. The protein solution was washed out with 100 µL of wash buffer per well and blocked with 100 µL of blocking solution for 90 min. The plates were washed six times with 100 µL of wash buffer per well and then 25 µL biotinylated aptamer probes or 25 µL of fluorescent nanoparticle probes were added in binding buffer and incubated for 1 h. For biotinylated probes, wells were then washed three times with wash buffer, and 50 µL of binding buffer containing 5 µg/mL Streptavidin Poly-HRP (Thermo Fisher Scientific 21140) was added to each well and incubated for 30 min with shaking at 500 RPM. A solution of QuantaRed HRP substrate (Thermo Fisher Scientific, 15159) was prepared according to manufacturer’s protocol, and 50 µL of the substrate was added to each well and incubated for 5 min followed by addition of 5 µL stop solution. For fluorescent nanoparticles probes, wells were washed six times with wash buffer after the 1 h incubation with probes. Fluorescence was measured on a Tecan Infinite 200 microplate spectrophotometer.
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3

Antibody-Based Extracellular Protein Detection

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Antibodies used to make microarrays, with their concentrations, are listed in Supplementary Table 1. Antibody hybridoma clones were selected for their ability to recognize extracellular epitopes of proteins on human cells. Most antibody solutions contained 0.1% (w/v) bovine serum albumin (BSA). However, for some antibodies, BSA reduced the sensitivity of detection, so was omitted as indicated (Supplementary Table 1). Isotype control antibodies (±BSA) were included in the microarray to detect non-specific binding. Biotinylated EpCAM (CD326) and CD19 antibodies (BioLegend, San Diego, CA, USA; catalogue numbers 324216 and 302203, respectively) were used to detect EV derived from LIM1215 and MEC1/CLL cells, respectively, captured on DotScan microarrays. Streptavidin poly-HRP and SuperSignal West Pico Chemiluminescent Substrate were purchased from Thermo Scientific (Rockford, IL, USA). BSA was from Sigma-Aldrich (Castle Hill, NSW, Australia).
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4

Sandwich ELISA for Vasoinhibin and PRL

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For the sandwich ELISA (Figure 1C), the plates were coated with 100 µl of 1.1 µg/ml antibodies in carbonate buffer, and incubated overnight at 4°C. The blocking of the wells was performed the same way as for the indirect ELISA. Afterwards, various concentrations of vasoinhibin, PRL, human serum (diluted up to 1 to 20 in TBST) and BSA as blank were dissolved in 100 µl of TBST, added to the wells and incubated for 1 h at RT while shaking. The bound antigen was detected by the biotinylated antibodies, which were diluted 1 to 3000 in 100 µl TBST overnight at 4°C. Streptavidin-poly-HRP (Thermo Fisher Scientific, 21140) was added diluted 1 to 3000 in 100 µl TBST for 1 h while shaking. The detection was performed the same way as for the indirect ELISA. The standard curves were fitted on the basis of the 4-parameter Rodbard equation. Cross-titration was performed to determine the most efficient caption and detection antibody concentration. Therefore, a sandwich ELISA with a constant antigen concentration of 5 µg/ml, various caption antibody concentrations (1, 2, 3, 4, 5, 6 µg/ml), and various detection antibody dilutions (1 to 1000; 1 to 2000, 1 to 3000, 1 to 4000) was performed. PRL in human sera was determined by a commercial ELISA kit according to the instructions of the manufacturer (cat. no. EIA-1291, DRG Diagnostics, Marburg, Germany).
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5

Lectin binding assay for rFVIII

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rFVIII products were adsorbed to Maxisorp microtitre plates at 1 μg/mL overnight at 4°C. All products saturated binding at this concentration (Online Supplementary Figure S1). Plates were blocked with 1% BSA in phosphate buffered saline (PBS) + 0.01% Tween-20 for 1 hr, and subsequently incubated with biotinylated lectins (Vector Laboratories, Burlingame, CA, USA) for 30 min. Detection was facilitated using streptavidin-poly-HRP (ThermoFisher Scientific, Waltham, MA, USA) and developed for 5 min. Statistical analysis was performed using the Student t test.
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6

ELISA Assay for Total α-Synuclein in CSF

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An in-house ELISA assay was developed to measure total α-syn in CSF samples. A 96-well Polysorp NUNC microplate (Thermo Fischer Scientific, USA) was coated with the capture antibody (4B12, BioLegend) in coating buffer overnight at 4 °C. The plate was then washed three times with phosphate-buffered saline with 0.05% Tween-20 (PBST) and incubated with 300 μL/well of blocking buffer for 1 h at 37 °C. After three washes with PBST, serially diluted recombinant α-syn and thawed CSF (diluted 3:1 with sample dilution buffer) were applied to each well and incubated for 2.5 h at room temperature (RT). Subsequently, the plate was washed five times and incubated with the biotinylated detection antibody (4D6, BioLegend) in the reaction solution for 1 h at RT. After washing, the plate was incubated with streptavidin poly-HRP (Thermo Fischer Scientific, USA) in the reaction solution for 0.5 h at 37 °C. Finally, the plate was washed five times and reacted with TMB substrate (Thermo Fischer Scientific, USA) for 0.5 h at RT in the dark. The optical density was measured after adding the stop solution. Reagents (AGMIG-0100, Arista biologicals) to mitigate heterophilic antibody interference was included in all assays to remove false signals.
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7

Pharmacokinetics of Cytokine Fusion Proteins

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To evaluate PK, three C57BL/6 mice for each time point were administered a single intravenous (IV) dose of 5 µg mIL12-FHAB-His, hIL15-FHAB-His, mIL-12-His, or hIL-15-His. Quantitation of each compound in serum was performed with an ELISA, based on consistent detection of a histidine (His) tag to avoid potential interference from the native cytokines. Plates were coated overnight with 6x-His Epitope Tag Antibody (Pierce Cat#His.H8) at 2-8°C, then washed, and sample dilutions added for 1 h incubation at room temperature. Rabbit anti-6-His biotinylated secondary antibody (Bethyl Cat# A190-114B) was then added to the wells for 1 h at room temperature, followed by streptavidin poly-HRP (ThermoScientific Cat# 21140) for 30 minutes at 37°C. The reaction was stopped with H2SO4 and the plates were read at 450nm.
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8

Quantitative IgE Measurement by ELISA

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IgE measurements were performed following the protocol by Kobayashi et al., 2009 [68 (link)]. Briefly, ELISA plates (Immulon 4 HBX; Thermo Labsystems, Philadelphia, PA, USA) were coated with 5 μL/mL rat anti-mouse IgE mAb (LO-ME-3; Bio-Rad, Hercules, CA) in 0.1 M carbonate buffer (pH 9.5) for 2 h at 37 °C. Blocking was performed with PBS containing 1% BSA (MilliporeSigma, Burlington, MA, USA) overnight at 4 °C. After blocking, plasma samples diluted with PBS containing 1% BSA and 0.05% Tween 20 were added to the plates, and incubated for 2 h at room temperature. Afterwards, plates were treated with 1 μg/mL OVA or OVA + PEI, which had been biotinylated using a microbiotinylation kit (MilliporeSigma,), for 1 h at room temperature, followed by 1/5000 streptavidin-poly-HRP (ThermoFisher) for 30 min at room temperature. After the final washing, peroxidase substrate (TMB substrate kit) was added and the reaction stopped 20 min later with 1 M HCl. After each step, plates were washed with PBS containing 0.05% Tween 20. A microplate autoreader (Thermomax; Molecular Devices, San Jose, CA, USA) was used to measure absorbance at 450 nm.
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9

T-Cell Response and IL-2 Production

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APCs were cultured overnight with T-cell hybridomas (6.9-11, 6.9-51, and 6.9-61) recognizing the 6.9HIP. The T-cell responses were tested for IL-2 production measured by IL-2 ELISA (Bectin Dickinson) coupled with streptavidin-poly HRP (Thermo Fisher). The responses were quantified using the OptEIA TMB Substrate (Bectin Dickinson), and the data (OD at 450 nm) were collected using an iMark Microplate Reader (Bio-Rad Laboratories).
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10

Quantification of IgA1 and IgA2 in Cell Supernatants

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ELISA plates (# 650‐061, Greiner Bio One) were coated overnight with 1.0 μg/mL Polyclonal goat anti human IgA (Southern Biotech, 2050‐01). The next day, plates were washed (0.05% tween in PBS) once and blocked with 5% non‐fat dry milk powder (Friesche Vlag). After blocking, plates were washed three times and the 50 μL undiluted cell culture supernatants were added to 50 μL blocking buffer (non‐fat dry milk) per well. The IgA1 and IgA2 recombinant proteins (16‐16‐090701‐1M and 16‐16‐090701‐2M, Athens Research) were serially diluted in blocking buffer to obtain a standard curve. Plates were incubated for 90 min at 37°C. Plates were washed and incubated with 1:5000 biotinylated anti‐IgA1 (#9130‐08, Southern Biotech) or 1:2000 biotinylated anti‐IgA2 (#9140‐08, Southern Biotech) for 1 hour at room temperature while shaking (180 rpm). Plates were washed 6 times and 1:10 000 streptavidin poly HRP (#21140, Thermo Fisher Scientific) was added and incubated for 1 h at room temperature while shaking (180 rpm). 100 μL TMB (#37574 Thermo Fisher Scientific) was added. Plates were developed, subsequently stopped with 2% HCL and measured at 450 nm with 620 nm as reference.
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