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5 protocols using diaminobenzidine substrate chromogen system

1

Immunohistochemical Detection of CADM1 in Tissue Sections

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Three μm-thick sections were cut from formalin-fixed and paraffin embedded tissues, mounted on slides coated with 3-aminopropyltriethoxysilane, deparaffinized in xylene and rehydrated in descending grades of ethanol. Antigen retrieval was performed in a water bath for 20 min at 98°C at Target Retrieval Solution, pH 9.0 (DAKO). Nonspecific staining was blocked by treating the sections with 5% donkey serum in Tris-buffered saline (pH 6.0) for 30 min. CADM1 immunohistochemistry was performed with a monoclonal chicken antibody (3E1, MBL International) diluted at 1:1,000 in Antibody Diluent (DAKO). The slides were incubated with donkey anti-chicken IgY-HRP conjugated (EMD Millipore, Temecula, CA) as a secondary antibody at 1:500 dilution. Signals were developed with diaminobenzidine substrate chromogen system (DAKO), and counterstained with hematoxylin. Images were obtained under All-in-One Fluorescence Microscope (KEYENCE, Osaka, Japan).
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2

Histological Analysis of Aortic Calcification

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After organ culture for 7 days, thoracic aorta segments were washed with PBS and fixed with 10% neutral buffer formalin. The specimens were then embedded in paraffin, and 5μm cross-sections were cut. The sections were deparaffinized and H&E staining was performed. Arterial medial calcification was visualized using Alizarin Red S staining as previously described 23 (link). For immunohistochemistry, the sections were deparaffinized, followed by treatment with citrate buffer for antigen retrieval and 3% H2O2. The sections were blocked with Dako serum-free blocking solution (Dako North America, USA) and incubated with primary antibody for overnight at 4°C. The primary antibodies included SM22α (Abcam, ab14106), Osterix (Abcam, ab94744). Subsequently, the sections were incubated with biotinylated secondary antibodies for 30 min at room temperature. Avidin-biotinylated enzyme complex (Vector Laboratories, USA) and a diaminobenzidine substrate chromogen system (Dako North America, USA) were used for detection. Sections were counterstained with hematoxylin. The images were captured by Olympus DP260.
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3

Quantifying CD8+ T Cell Density in NSCLC

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Serial 5 µm formalin-fixed paraffin-embedded NSCLC sections were stained using the Dako Autostainer Plus. Heat-mediated antigen retrieval was performed using the EnVision FLEX Target Retrieval Solutions (Agilent, Dako, California, USA) at pH9 for 30 min on a PT-Link (Dako). Immunodetection of CD8 expression was done using a mouse anti-human CD8 antibody (Clone C8/144B). (Dako) at 1.6 µg/mL for 30 min in Dako REAL Antibody Diluent (Dako). Signal intensity was improved with EnVision +System-HRP-labeled Polymers anti-mouse (Dako) and peroxidase was detected using diaminobenzidine +Substrate—Chromogen System (Dako). Slides were then counterstained with Hematoxylin (Dako) and mounted with Glycergel Mounting Medium (Dako). Slides were then digitalized using a NanoZoomer scanner (Hamamatsu Photonics, Hamamatsu, Japan) and CD8 density was quantified with Halo software (Indica Labs, New Mexico, USA).
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4

Alport Syndrome Tissue Immunohistochemistry

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Immunohistochemistry on Alport patient tissue was performed as follows:
after antigen heat retrieval, 3 μm sections of the formaldehyde-fixed,
paraffin-embedded biopsy specimens were incubated with our specifically
in-house raised rabbit monoclonal anti-human DDR1 antibody at a 1:100
dilution 1 h at RT followed by an antirabbit antibody for 30 min (RT)
and then liquid diaminobenzidine substrate-chromogen system (DakoCytomation,
Glostrup, Denmark). Counterstaining was performed using Mayer hematoxylin.
Stained sections were examined with a Zeiss microscope.
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5

Sclerostin Expression Visualization in Femora

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The expression of sclerostin was visualized in paraffin-embedded femora from 5-month-old WT and Sost−/− mice 28 days after pellet implantation, as described.(35 ,40 (link)) Sclerostin was visualized in deparaffinized sections of decalcified femurs, treated with 3% H2O2 to inhibit endogenous peroxidase activity, blocked with serum, and then incubated with goat polyclonal anti-mouse sclerostin antibody (1:100; Abcam, Cambridge, MA, USA; catalog Ab63097).(34 (link)) Sections were then incubated with anti-goat biotinylated secondary antibody followed by avidin conjugated peroxidase (Vectastain Elite ABC Kit; Vector Laboratories, Burlingame, CA, USA; catalog PK-6105). Color was developed with a diaminobenzidine substrate chromogen system (DAKO, Carpinteria, CA, USA). Cells expressing the protein of interest are stained in brown, whereas negative cells are green-blue.
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