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Buffered formalin solution

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Buffered formalin solution is a laboratory reagent used as a fixative for histological and cytological specimens. It is a mixture of formaldehyde, buffer, and water. The primary function of this solution is to preserve the structural and chemical integrity of biological samples, enabling effective downstream analysis and examination.

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16 protocols using buffered formalin solution

1

Oil Red-O Lipid Staining Protocol

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Monolayers were rinsed three times with PBS, fixed in buffered formalin solution (Sigma) and then stained with Oil Red-O solution (Solarbio, Beijing, China). After rinsing in distilled water, the monolayers were counterstained with Gill’s III and mounted with Prolong Gold antifade reagent (Invitrogen, Carlsbad, CA, USA).
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2

Histopathological Analysis of Liver Tissue

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For histopathological observations, a portion of the middle lobe of the liver was dissected and fixed in 10% buffered formalin solution (Sigma-Aldrich, Steinheim, Germany) for 24 h. After the fixation, the tissue was embedded in paraffin, cut to a thickness of 5 μm, and stained with hematoxylin (Sigma-Aldrich, Steinheim, Germany) and eosin (Sigma-Aldrich, Steinheim, Germany) (H&E) for observation using an optical microscope with 100-fold magnification.
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3

Multipotent Cell Differentiation Assay

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Cells were plated in 12-well plates at a density of 5 × 104 cells per well. Once 100% confluency was reached, three wells were treated with control media (DMEM 10% FBS), three wells were treated with osteogenic differentiation media (1 nmol/L dexamethasone, 20 mmol/L β-glycerolphosphate, and 50 μmol/L l-ascorbic acid 2-phosphate; Sigma-Aldrich), and three wells were treated with adipogenic differentiation media (0.5 μmol/L dexamethasone, 0.5 μmol/L isobutylmethylxanthine, 50 μmol/L indomethacin; Sigma-Aldrich) 28 (link). Cells were maintained for 21 days, and were then fixed in 10% buffered formalin solution (Sigma-Aldrich) and stained with Alizarin Red (Sigma-Aldrich) for osteogenesis and oil red O stain (Sigma-Aldrich) for adipogenesis 28 (link).
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4

Quantifying Cardiac Fibrosis and Myofibroblasts

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To assess cardiac fibrosis, harvested hearts were perfused with 10 ml of PBS followed by 10% buffered formalin solution (Sigma) for 24 hours then embedded in paraffin. Sections (8-μm) were cut from left ventricular tissue, stained with standard Masson’s trichrome as per the manufacturer’s instructions (Sigma). Cultured fibroblasts were fixed in 3.7% formaldehyde solution (Sigma) in PBS for 10 minutes and permeabilized using 0.1% Triton-X (Sigma). To detect the polymerized actin cytoskeleton, cells were incubated in 0.5 μM solution of Alexa Fluor 488-conjugated phalloidin (Life Technologies) in PBS for 1 hour at room temperature. DAPI (Life Technologies) was used to stain nuclei. Image Quantifications: NIH Image J software was used to quantify % fibrosis and myofibroblast cell size. Blue colored area positively stained with Masson trichrome was measured in the entire cross-sectional area of ventricular tissue using Image J software. % blue area to the total area gives an index of % fibrosis as we described previously [29 (link)].
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5

Immunofluorescent Visualization of Lymphatics

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At euthanization, kidneys were collected, cut sagittally into halves, and fixed in 10% buffered formalin solution (Sigma, St. Louis, MO, USA) for 48 h. Following fixation, kidney halves were washed in 100% ethanol and embedded in paraffin. Kidney halves were cut into 5–7 μm sections, which were deparaffinized, rehydrated, and permeabilized with 0.1% Triton solution (BioRad, Hercules, CA, USA). Tissue was blocked with 10% AquaBlock solution (EastCoastBio, North Berwick, ME, USA) before being immunolabeled with the lymphatic endothelial cell markers LYVE-1 or podoplanin (goat polyclonal; R&D Systems, Minneapolis, MN, USA) by overnight incubation at 4 °C. Alexafluor 488 or 594 (Life Technologies, Carlsbad, CA, USA) secondary antibodies were used to visualize lymphatic vessels. Samples were incubated with appropriately conjugated secondary antibodies for an hour at room temperature. Negative controls were incubated with only a secondary antibody. All labeled slides were mounted with ProLong Gold anti-fade reagent containing DAPI (Invitrogen, Carlsbad, CA, USA). An Olympus BX51 fluorescence microscopy system with Olympus Q5 camera was used for imaging. Images were captured at 40× magnification using Olympus CellSens imaging software (Olympus, Shinjuku, Tokyo, Japan). The same methods were utilized to image lymphatics in the heart, liver, lung, and skin (10× or 20× magnification).
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6

Histopathological Analysis of Prostate Inflammation

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Prostates were isolated as described below and fixed in 10% buffered formalin solution (Sigma) for 24–36 h. Paraffin-embedded, 5-μm-thick prostate sections were stained with H&E for blinded histopathology interpretation. Inflammation was graded from 0 to 4 (0 = none, 1 = very focal, 4 = extremely severe with loss of glandular section; scores 2 and 3 were increments between 1 and 4). For immunoperoxidase staining of mouse T cells, adjacent 5-μm-thick prostate sections were deparaffinized and hydrated. Endogenous peroxidase was blocked by Peroxidase Alkaline Phosphatase Blocking Reagent (Dako) and incubated overnight at 4°C with hamster anti-mouse CD3 monoclonal antibody (145-2C11; eBioscience) followed by goat anti-hamster IgG (1:100; Vector Laboratories) at room temperature. Samples were subsequently incubated with avidin-biotin complex (Vector Laboratories), and peroxidase was detected by 3,3′diaminobenzidine tetrahydrochloride (Vector Laboratories) until optimal color intensity was achieved. Counterstain was methylene blue.
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7

Comprehensive Animal Organ Analysis

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All animals were weighed and examined externally. The cranial, thoracic, and abdominal cavities were opened for macroscopy. The brain, heart, liver, thymus, kidneys, adrenals, spleen, testes or ovaries of dogs and rats were weighed at the end of the experiment. In addition, the dog prostate was weighed. Samples of organs and tissues were collected from each animal into a 10% buffered formalin solution (Sigma, USA). Five micrometer thick slices were prepared from the fixed samples, stained with hematoxylin-eosin, and examined under a microscope (AxioScopeA1, Carl Zeiss, Germany).
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8

Opossum Embryo and Tissue Fixation

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All opossums originated from a captive-bred research colony housed at the University of New Mexico, Albuquerque, New Mexico. Animals were bred and used under protocols approved by the Institutional Animal Care and Use Committee, protocol numbers 13-100920-MCC and 15-200334-B-MC. Embryos, neonates, and spleen tissue were collected from adult pregnant or nursing female opossums euthanized by isoflurane overdose. Pregnant uteruses were excised, opened laterally, and embryos were removed. All tissues were fixed in buffered formalin solution (10%, Sigma-Aldrich) overnight and then stored at 4°C in 70% ethanol solution until paraffin-embedding. Prior to embedding, tissues were dehydrated in a series of ethanol washes of increasing concentration and then submerged in chloroform overnight. Then tissues were embedded in paraffin wax blocks after being submerged in wax and incubated at 65°C under vacuum. Paraffin-embedded tissues were sliced 6μm thick and mounted on charged glass slides.
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9

Immunohistochemical Characterization of Canine Melanocytes

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Collected tumor tissues from dogs and xenograft were fixed in 10% buffered formalin solution (Sigma-Aldrich, St Louis, MI) and paraffin embedded for routine pathological analysis. Immunohistochemical staining was carried out on 4- to 6-μm-thick slides using an automated protocol developed for the Discovery XT automated slide staining system (Ventana Medical Systems, Inc.). Alongside haematoxylin–eosin staining (HE), the following commercially available antibodies were used for the phenotypical characterization of melanocytes: Melan-A (Thermo Fisher Scientific, Waltham, MA), S-100 protein (Dako, Agilent Technologies, Denmark), Vimentin, and cytokeratin (Biogenex Laboratories, San Ramon, CA) (see Additional file 1). Tumor sections were deparaffinized and incubated for 1 h with the appropriate antibody before incubation with Discovery UltraMap anti-Rabbit (760–4315, Roche, Basel, Switzerland) or anti-mouse horseradish peroxidase (HRP) (760–4313, Roche, Basel, Switzerland) secondary antibodies and the Discovery ChromoMap DAB kit reagents (760–159, Roche, Basel, Switzerland) (Additional file 1).
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10

Immunofluorescent Staining of Mouse Tumor Vasculature

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Mouse tumor tissues were fixed in 10% buffered formalin solution (Sigma-Aldrich) at room temperature and infiltrated with 20% sucrose overnight at 4 °C. Tumor tissue blocks were then imbedded with OCT Tissue-Tek compound (SAKURA, West Chester, PA, USA) onto a PVC plastic mold and rapidly frozen to −30 °C in dry ice, 15 μm thick sections (at least 10 slices per block) were obtained using a Leica CM1850 cryostat (Leica Microsystems, Wetzlar, Germany). Frozen sections were dried for 2 h at room temperature, washed with PBS three times for 3 min, and surface tensions reduced using an application of 0.05% triton X-100 2 times for 5 min. Sections were blocked in 5% normal goat serum (Jackson ImmunoResearch Laboratories, Inc., West Grove, PA, USA) for 1 h, incubated overnight in a humidified chamber with each primary antibody, 1:200 Rat-anti mouse PECAM (CD31) and Rat-anti mouse VE-Cad (CD144) (Both from BD bioscience, La Jolla, CA, USA), washed with PBS with 0.1% Triton X-100, and then incubated for 1 h with secondary antibodies 1:500 FITC goat anti-rat IgG (BD bioscience) at room temperature. After washing with PBS, samples were mounted with ProLong Gold anti-fade regent containing 4′,6-diamidino-2-phenylindole (DAPI, Invitrogen), and confocal fluorescence images were acquired using the FV10i FLUOVIEW Confocal Microscope (Olympus, Tokyo, Japan).
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