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7 protocols using sudhl 5

1

Culturing Common Cell Lines

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HeLa (ATCC® CCL-2™), SUDHL-5 (ATCC® CRL-2958™), HEK-293 (ATCC® CRL-1573™), A549 (ATCC® CCL-185™) were obtained from ATCC (USA) and U2932 was purchased from Leibniz Institute (DSMZ, Germany). Petri-dishes (10 cm) were used for expanding the HeLa, A549, and HEK-293 cells in presence of eagle’s minimum essential medium (EMEM) which was supplemented with 10% fetal bovine serum (FBS) in the absence of antibiotics. Suspended cell lines including SUDHL-5 and U2932 were cultured in 75 cm2 flasks using RPMI-1640 medium with 10% FBS without any antibiotic.
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2

Cytotoxicity Assay of PNA-155 Analogs on DLBCL Cells

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Diffused large B cell lymphoma (DLBCL) cell lines like SUDHL-2 (ATCC® CRL-2956™) and SUDHL-5 (ATCC® CRL-2958™) cells were purchased from ATCC (Virginia, USA). The cells were regularly tested for mycoplasma contamination using MycoAlert mycoplasma detection kit (Lonza). All the cells used in the experiment were passaged less than 8 times. 10,000 U2932, SUDHL-5, or SUDHL-2 cells were plated in a 96 well plate. The cells were treated with different doses (500 nM, 1000 nM, 2000 nM and 4000 nM) of PNA-155, gamma tcPNA-155 or Scr-gamma tcPNA-155 for 48 hrs in an incubator (37 °C and 5% CO2). The dead cells were marked with trypan blue. Further counting was performed using an automated cell counter (Bio-rad).
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3

Cell Line Cultivation and Characterization

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Cancer cell lines used in this study include MM1S (ATCC, CRL-2974), UACC257 (NCI), KMS26 (JCRB, JCRB1187), KMS34 (JCRB, JCRB1195), 22Rv1 (ATCC, CRL-2505), SNU216 (KCLB, 00216), SUDHL5 (ATCC, CRL-2958), GSS (RIKEN, RCB2277), PANC1005 (ATCC, CRL-2547), PC9/14 (ECACC, 90071810), DLD1 (ATCC, CCL-221), MCC142 (ECACC, 10092303). Human cell lines were verified based on Short Tandem Repeat (STR) profiles by the providers. All cancer cell lines were grown in RPMI-1640 (Gibco) media using standard cell culture conditions (37°C, 5% CO2) and were free of microbial contamination including mycoplasma. All media were supplemented with 100 U/ml penicillin, 100 μg/ml streptomycin (Gibco), 10% FBS (Omega Scientific), and 2 mM GlutaMAX (Gibco).
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Culturing Diverse Leukemia Cell Lines

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HL60 (AML), K562 (chronic myeloid leukemia), Kasumi (AML), KG1a (AML), MV4-11 (AML), THP-1 (AML), A3 (T-cell acute lymphoblastic leukemia, T-ALL), CCRF-CEM (T-ALL), Jurkat (T-ALL), Molt4 (T-ALL), KBM-3 (AML), PL-21 (AML), NB4 (acute promyelocytic leukemia, APL), SU-DHL-5 (diffuse large B-cell lymphoma, DLBCL) were purchased from ATCC. All cells except KBM3 were maintained in RPMI1640 medium with GlutaMax. Media were supplemented with 10% heat-inactivated FBS, 100 U/mL penicillin, and 100 μg/mL streptomycin. KBM3 cells were cultured in Iscove's Modified Dulbecco's Medium with GlutaMax with 15% heat-inactivated FBS supplemented with 2% l-glutamin. Cells were maintained at 37°C, 5% CO2 in a humid incubator, passaged a maximum of 25 times, checked for Mycoplasma contamination (MycoAlert Mycoplasma Detecton Kit, Lonza) every other month.
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5

Cell Culture Conditions for Lymphoma Cell Lines

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The NCI-BL2171 (Cat#CRL-5969), SU-DHL-5 (Cat#CRL-2958), and Toledo (Cat#CRL-2631) cell lines were obtained from ATCC, while the OCI-Ly7 (Cat#ACC-688) cell line was obtained from DSMZ. NCI-BL2171, SU-DHL-5, and Toledo were grown in ATCC-formulated RPMI-1640 medium (Gibco, Fisher Scientific, Cat#A1049101) supplemented with 10% FBS (Cytiva Hyclone, Fisher Scientific, Cat#SH300880340). OCI-Ly7 was grown in IMDM (Gibco, Fisher Scientific, Cat#12440053) supplemented with 20% FBS (Cytiva Hyclone, Fisher Scientific, Cat#SH300880340). All cell lines were maintained in T-75 flasks (CELLTREAT Scientific Products, Fisher Scientific, Cat#50202080) in an incubator set to 37 • C and 5% CO 2 .
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Culturing 16 DLBCL Cell Lines

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The 16 DLBCL cell lines (DOHH2, HT, OCI-LY19, DB, OCI-LY1, SUDHL-4, SUDHL-5, SUDHL-10, NUDHL-1, OCI-LY7, WSU-DLCL2, SUDHL-6, NUDUL-1, U2932, OCI-LY3, and RI-1) were purchased from the American Type Culture Collection or from DSMZ (Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Germany). They were grown in RPMI-1640 Glutamax medium (Gibco, Invitrogen, Cergy Pontoise, France), supplemented with 10% fetal bovine serum (FBS) (PAA laboratory GmbH, Pasching, Austria) (U2932, SUDHL-4, HT, DOHH2, SUDHL-10, RI-1, and WSU-DLCL2 cells), 20% FBS (OCI-LY3, DB, SUDHL-5, NUDHL-1, and SUDHL-6 cells), or 15% FBS (NUDUL-1 cells). OCI-LY1, and OCI-LY7 cells were cultured in IMDM Glutamax (Gibco, Invitrogen, Cergy Pontoise, France), supplemented with 20% FBS, and OCI-LY19 cells in MEM alpha modified Glutamax (Gibco, Invitrogen, Cergy Pontoise, France) with 20% FBS. Cultures were maintained at 37 °C in a humidified atmosphere with 5% CO2. Contamination by Mycoplasma species was regularly monitored.
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7

Culturing DLBCL Cell Lines

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Human DLBCL cell lines (U2932, HT, SU-DHL-5, and RC-K8) were purchased from the American Type Culture Collection (ATCC, Rockville, MD, USA) and the Bioresource Collection and Research Center (BCRC, Hsinchu, Taiwan). The DLBCL cell lines were cultured at 37 °C in a humidified 5% CO2 incubator in RPMI 1640 (HCC38) supplemented with 10% fetal bovine serum ((FBS) Merck, Darmstadt, Germany), 2% penicillin-streptomycin ((P/S) Gibco Thermo Fisher Scientific, Waltham, MA, USA), 10 mM HEPES (Gibco Thermo Fisher Scientific), 2 mM L-glutamine (Gibco Thermo Fisher Scientific), 2 g/L D-glucose (Sigma Aldrich, St Louis, MO, USA), and 1 mM Sodium Pyruvate (Gibco Termo Fisher Scientific).
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