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13 protocols using collagenase 2

1

Detailed Chemicals and Reagents Protocol

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Most of the chemicals were purchased from Sigma (St. Louis, MO, US), including hydroxyethylcellulose (#09368), Evans blue dye (#E2129), triphenyltetrazolium chloride (#T8877), HEPES buffer (#H3375), dimethyl-sulfoxide (DMSO #D5879 or #D2650), 2-Deoxy-D-glucose (#D8375), and laminin (#L2020). Other sources: heparin (Merck, Darmstadt, Germany, #375095), rofecoxib (MedChemExpress Europe, Sollentuna, Sweden, #HY-17372), pentobarbital (Produlab Pharma, Raamsdonksweer, The Netherlands, #17F015), MgSO4 (Reanal, Budapest, Hungary, #20341), collagenase II (Biochrom GmbH, Berlin, Germany, #c2-22), fetal bovine serum (FBS, EuroClone, Pero MI, Italy, #ECS0180L), M199 (Lonza, Verviers, Belgium, #BE12-117F), Bovine Serum Albumin (BSA, Santa Cruz Biotechnology, Santa Cruz CA, USA, #sc-2323), calcein AM (PromoCell GmbH, Heidelberg, Germany, #PK-CA707-80011-3), Dulbecco’s Phosphate-Buffered Saline (DPBS, Gibco, Grand Island New York, USA, #14080-055).
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2

Mechanical Loading of Murine Tenocytes

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Achilles tendons from female C57BL/6J mice (26 weeks) were harvested and the whole tendon was used to isolate tenocytes by enzymatic digestion with Collagenase II (3mg/mL, Biochrom AG, Berlin, Germany) for 2 h at 37 °C. Cells were grown in growth medium (Dulbecco’s Modified Eagle Medium (DMEM), with 10% fetal calf serum (FCS), and 1% Penicillin/Streptomycin (P/S), all Biochrom AG, Berlin, Germany) and passaged at a confluency of 90%. At passage 3, cells were trypsinized and seeded with a concentration of 3 × 104 cells/well onto Collagen type I coated plates (Flexcell International Corporation, Burlington, USA). Prior to mechanical loading, cells were starved overnight for cell cycle synchronization in growth medium supplemented with 1% FCS. Mechanical stimulation was performed with the FX-4000TM Tension system (Flexcell International Corporation, Burlington, USA) with two different loading protocols: 1) 216 cycles at 4 Hz, 4% elongation per day, 5 days; 2) 216 cycles at 4 Hz, 4% elongation, 30 min rest insertions, 5 repetitions, 4 h. Non-loaded controls were cultured in the same plates, but did not receive mechanical loading. RNA isolation and staining of the cytoskeleton was performed after the last cycle.
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3

Isolation of Lung Cell Populations

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Cells from the circulation were removed from the pulmonary vasculature by flushing the lung with 10 ml of PBS at 25 cmH2O through the spontaneously beating right ventricle. After removal of the heart and surrounding connective tissue, lungs were mechanically dissociated with a McIlwain tissue chopper (TC752) and gently dissociated by sequent pipetting steps, then digested for 1 hr at 37 °C in 10 ml PBS containing 10 mg collagenase II (295 U/mg, BioChrom AG, Berlin, Germany), 1 mg hyaluronidase (Sigma, Taufkirchen, Germany), and 300 U DNase I (Sigma, Taufkirchen, Germany). Digested lungs were filtered through a 70 µm BD Falcon cell strainer (BD Falcon, Bedford, MA, USA), the resulting cells were washed with PBS, and erythrocytes were lysed with ACK buffer. Centrifugation and resuspension of cells in MACS buffer followed.
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4

Isolation and Expansion of Adipose-Derived Mesenchymal Stem Cells

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Fat tissues (obtained from hip or abdomen) were cut into mm-size pieces using a scalpel. The samples were washed several times with phosphate buffered saline (PBS). To release Ad-MSCs from the tissue samples were incubated in a 0.7% collagenase II solution (Biochrom, Berlin, Germany) for approximately 30 minutes at 37 °C. The addition of culture medium (DMEM 4.5 g/L glucose, 10% FCS, 100 U/mL penicillin, 100 µg/mL Streptomycin) stopped the collagenase II activity. After centrifugation at 600 g for 10 min the Ad-MSC pellet was re-suspended in culture medium for expansion (37 °C, 5% CO2, humidified atmosphere). Experiments were performed in passage 3 or 4 when Ad-MSCs were negative (determined by RT-PCR) for CD14 and positive for CD73, CD90, and CD105, as reported earlier [21 (link),39 (link)].
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5

Isolation and Expansion of Skeletal Myocytes

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Adult Wistar rats (Charles River) were euthanized in CO2 anesthesia by cervical dislocation. Organ harvest was approved by the Niedersächsisches Landesamt für Verbraucherschutz und Lebensmittelsicherheit (LAVES: AZ 10/13). For one series of ESM skeletal muscle from both hind limbs (total 20‐30 g) of one Wistar rat (6‐8 weeks old) was collected in basal medium (DMEM/F12, 5% fetal bovine serum [FBS], 2 mmol/L glutamine, 100 U/ml penicillin, 100 µg/ml streptomycin) on ice. Connective tissue and tendons were removed and the muscle was minced to a fine slurry. This was digested for 90 min at 37°C using 2.5 mg/ml Collagenase II (Biochrom) and 20 µg/ml DNAse I (Calbiochem) in basal medium. The tissue suspension was subsequently passed through filters with gradually decreasing mesh size (250 100 40 µm, BD Biosciences). The cell suspension was then preplated for 1 hour in basal medium on cell culture dishes to reduce the number of fibroblasts. The non‐attached cells were resuspended in proliferation medium (basal medium supplemented with 10 ng/ml bFGF; PeproTech), 10 ng/ml EGF (PeproTech), Insulin‐Transferrin‐Selenite (ITS) + X (100x; Invitrogen) and expanded for 5 days on uncoated flasks without further passaging. For implantation experiments transgenic Lewis rats with ubiquitous expression of EGFP were used for skeletal myocyte preparation.28
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6

Isolation and Culture of Osteoblasts

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Briefly, cancellous bone was removed mechanically from the femur head and washed 3–5 times with DPBS. After 1 h of collagenase digestion (DPBS, 0.07% Collagenase II — Biochrom AG, Berlin, Germany) at 37 °C, cancellous bone was washed with DPBS and released pre-osteoblasts were transferred to cell culture flasks in culture medium (MEM/Ham's F12, 10% FCS, 2 mM l-glutamine, 100 U/ml penicillin, 100 μg/ml streptomycin, 50 μM l-ascorbate-2-phosphate, 50 μM β-glycerol-phosphate) for expansion. Medium was changed every 4–5 days. Experiments were performed in passage 3 and 4, when a pure population of osteoblasts was reached (negative for CD14 and CD45 and positive for CD90 and CD105), as determined by flow cytometry (Ehnert et al., 2010 (link)). In order to favor osteogenic differentiation, cells were cultured in differentiation medium (MEM/Ham's F12, 1% FCS, 2 mM l-glutamine, 100 U/ml penicillin, 100 μg/ml streptomycin, 200 μM l-ascorbate-2-phosphate, 10 mM β-glycerol-phosphate, 25 mM HEPES, 1.5 mM CaCl2, 100 nM dexamethasone) during the experiments.
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7

Collagenase-based Extraction of RNA from Cell-seeded Collagen Gels

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Cell-seeded collagen gels (six 0.5 mL-gels per experimental group) were removed from the transwell inserts and incubated with collagenase II solution (3 mg/mL collagenase II, 235 U/mg, Biochrom, Berlin, Germany in α-MEM, 10% FCS, 2 mM L-glutamine, 100 U/mL penicillin and 100 µg/mL streptomycin, 3 mM CaCl2) for 1 h at 37 °C. The digests were transferred to 15 mL tubes, washed with PBS and centrifuged. The pellets were washed with PBS and RNA was isolated from these pellets as well as from the osteoblast-seeded transwell membranes using a commercially available kit (peqGOLD MicroSpin Total RNA Kit, Peqlab, Erlangen, Germany). cDNA was generated using the High-Capacity cDNA Reverse Transcription Kit (Applied Biosystems, part of Thermo Fisher Scientific) according to manufacturer’s instructions.
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8

Isolation and Expansion of Osteoblasts from Cancellous Bone

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Briefly, cancellous bone was disintegrated mechanically and washed 3–5 times with Dulbecco’s phosphate buffered saline (DPBS). After 1 h of collagenase digestion (DPBS, 0.07% collagenase II—Biochrom AG, Berlin, Germany) at 37 °C, cancellous bone pieces were washed with DPBS and released OBs were transferred to cell culture flasks in growth medium (MEM/Ham’s F12, 10% FCS, 2 mM l-glutamine, 100 U/mL penicillin, 100 μg/mL streptomycin, 50 μM l-ascorbate-2-phosphate, 50 μM β-glycerol phosphate) for expansion. Medium was changed every 3–4 days [22 (link),23 (link)].
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9

Isolation of Periosteal Cells from Mastoid Autografts

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Periosteal cells were isolated from mastoid autografts (0.5 cm2) taken from four independent donors undergoing mastoidectomy according to a method previously described [7 ]. In brief, the periosteal flap was rinsed with Hanks solution (Biochrom, Berlin, Germany) three times, minced and digested for 3 hours in Dulbecco’s modified eagle medium (DMEM)/Ham’s F12 medium (Biochrom) containing 10,000 U/ml collagenase II (Biochrom), 10% human allogenic serum (German Red Cross, Berlin, Germany), 2.5% Hepes (Biochrom) and 1% penicillin/streptomycin solution (Biochrom). Subsequently, the cells were harvested, resuspended in DMEM/Ham’sF12 medium containing 10% human allogenic serum, plated in cell culture dishes (∅ = 15 cm), and allowed to attach for about 4–6 days.
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10

Meniscus Cell Isolation and 3D Culturing

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Tissue pieces measuring 7–10 mm3 from the central inner zone (white area) of the healthier (n = 12) and diseased (n = 12) human menisci were excised, and care was taken not to include the outer red zone. Samples of healthier menisci with an intact superficial zone (grading score: 2, n = 12) were also excised. After 7–10 days of incubation, only samples that lacked a superficial zone showed outgrowth of cells, which were harvested, and 103 cells/cm2 were transferred to a monolayer culture under standard conditions. 3D culturing was performed using alginate beads. Samples of 2–3 mm3 in size from the superficial area of healthier menisci (n = 7) and the central area of diseased menisci (n = 7) were harvested and digested with collagenase I (152 U/ml; Invitrogen), collagenase II (280 U/ml; Biochrom), and dispase (15 U/ml; Invitrogen) for 6 hr at 37°C.
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