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6 protocols using anti nestin mab353

1

Immunohistochemical Analysis of Tumor Samples

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All immuno-labeling were performed by the Lausanne Mouse Pathology Facility. Hematoxylin and eosin (H&E) staining was performed on all subcutaneous and orthotopic tumors. Immunohistochemistry (IHC) was performed using mouse monoclonal Ab anti-TH (MAB318, Millipore), rabbit polyclonal Ab anti-ALK (51-3900, Invitrogen), anti-Tyr (a gift from Bhushan Sarode, EPFL), anti-CD99 (Orb13719, Biorbyt), anti-Ncam1 (14255-1-AP, Proteintech), rat monoclonal Ab anti-CD44 (550538, BD Pharmingen), anti-Ptprc (CD45) (550539, BD Pharmingen), anti-nestin (MAB353, Millipore), anti-Ki67 (M7249, DAKO), anti-Phox2b (H-20, Santa Cruz Biotechnology).
Ki67 proliferation index was determined by analyzing 5 fields imaged at 40x magnification per tumor section in 4 different tumors from each group. Sections were imaged using a Zeiss Axio LabA1 microscope and Axiovision Rel. 4.5 imaging software.
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2

Antibody Profiling for Cartilage Research

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Anti–type I collagen cleavage site antibody (#0217-050) was purchased from ImmunoGlobe. Anti-Flag antibody (F3165) and anti-vinculin antibody (V9131) were purchased from Sigma-Aldrich. Normal mouse IgG (sc-2025), normal rabbit IgG (sc-2027), anti–phospho-JNK Thr183/Tyr185 antibody (sc-6254), anti–phospho-p38 Tyr182 antibody (sc-166182), anti-COL3A1 antibody (sc-271249), anti-actin antibody (sc-1615), anti-SOX9 antibody (sc-166505), and anti-SSEA4 (sc-21704) were purchased from Santa Cruz Biotechnology. Anti-fibronectin antibody (A0245) was purchased from DAKO. Anti-CTRP3 antibody (ab36870), anti-MMP13 (ab51072), anti-CD146 (ab75769), and anti–chondroitin sulfate (ab11570) were purchased from Abcam. Anti–phospho-Akt Ser473 (#9271), anti-Akt (pan) (#4685), and anti–phospho-Erk1/2 Thr202/Tyr204 (#4377) were purchased from Cell Signaling Technology. Anti-ACAN antibody (AB1031), anti–type II collagen antibody (MAB8887), and anti-nestin (MAB353) were purchased from Millipore. Rabbit anti-mouse IgG + IgM (H&L) conjugated with DyLight 488 (711-065-151) and goat anti-rabbit IgG + IgM (H&L) conjugated with DyLight 594 (111-585-003) were purchased from Jackson ImmunoResearch. Full-size immunoblot images are provided in fig. S19.
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3

Characterization of Pluripotent Stem Cells

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Di-hydrotashinone (DT, 1 µM, D0947, Sigma-Aldrich); actinomycin-D (1 μg/ml, CID 2019, Sigma-Aldrich); thiazolyl blue tetrazolium bromide – MTT (M2128, Sigma-Aldrich); anti-Nestin (MAB353, Millipore); anti-DCX (sc8066, Santa Cruz); anti-HuR (390,600, Invitrogen); anti-βTubIII (MMS-435P, Covance); anti-MAP2 (Ab5622, Millipore); anti-GFAP (PRB571c, Covance); anti-GalC (Mab 342, Millipore); anti-Olig2 (Ab9610, Millipore); pluripotent stem cells 4-Marker Immunocytochemistry Kit (A24881, Thermo Fisher); 4,6, diamino-2-phenyl-l-indole di-hydrocloride–DAPI (D259542, Sigma-Aldrich), Alexa Fluor® 488 (Life Technologies) Alexa Fluor® 546 (Life Technologies), cresyl-violet (Sigma-Aldrich), Peroxidase AffiniPure Goat Anti-Rabbit/Mouse IgG (Jackson).
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4

Molecular Mechanisms of Alzheimer's Disease

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Levodopa, bromocriptine, carbidopa, L-685,458, TAPI-1, Y-27632, and Forskolin (FSK) were purchased from Selleck Chemicals (Houston, TX, USA). Piribedil was from Tocris Bioscience (Bristol, UK). β-Secretase Inhibitor IV (BSI IV) was from Calbiochem (Hayward, CA, USA). Recombinant human BDNF, GNDF, IGF-I were from Peprotech (Rocky Hill, NJ, USA). cAMP and L-Ascorbic acid were from Sigma (St Louis, MO, USA). CellTiter-Glo was from Promega (Madison, WI, USA) and Effectene Transfection Reagent was purchased from QIAGEN (Hilden, Germany). Immunoblotting was performed with the following antibodies: anti-PS1 N-terminus (1–65) (PRB-354P, Covance, Davis, CA, USA); anti-APH1aL C-terminus (245–265) (PRB-550P, Covance); anti-NCT (N1660, Sigma); anti-Pen2 (P5622, Sigma); anti-BACE1 N-termimus (AP7774b, Abgent, Suzhou, China); anti-APP-CTF (A8717, Sigma); anti-sAPPα (secreted Amyloid Precursor Protein-α) (11088, IBL, Hokkaido, Japan); anti-HA (H6908, Sigma); anti-actin (A2066, Sigma); anti-D2R (sc-9913, Santa Cruz Biotechnology, Santa Cruz, CA, USA). Immunostaining was performed with the following antibodies: anti-nestin (MAB353, Milipore, Darmstadt, Germany); anti-Sox2 (sc-17320, Santa Cruz); anti-Ki67 (556003, BD Transduction Laboratories, San Jose, CA, USA), and anti-Doublecortin (DCX) (sc-8066, Santa Cruz).
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5

Immunostaining Protocols for Neural Markers

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XAV939 was purchased from Tocris Bioscience. BrdU and fluoxetine were from Sigma-Aldrich. The following antibodies were used for immunostaining: anti-Axin (A0481, Sigma-Aldrich), anti-Nestin (MAB353, Millipore), anti-Prox1 (sc-8025, Santa Cruz Biotechnology), anti-NeuN (MAB377B, Millipore), anti-doublecortin (DCX, AB2253; Millipore), anti-BrdU (OBT0030G, AbD Serotec), and anti-GFP (clone 3E6) Alexa Fluor 488-, 546-, and 647-conjugated secondary antibodies (Thermo Fisher).
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6

Immunohistochemistry of Bone Tissue Sections

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Frozen tissue sections prepared from 4% paraformaldehyde-fixed and decalcified bones were thawed at room temperature and then rehydrated with PBS. The slides were stained with the following antibodies (eBiosciences, San Diego, unless otherwise noted) following standard procedures: anti-Osteopontin (Abcam), anti-Nestin (MAB353, Millipore), anti-Gr-1 (RB6-8C5), anti-Mac-1 (M1/70), anti-B220 (RA3-6B2), anti-Ter-119 (TER-119), anti-CD3 (145-2C11, BD Biosciences), anti-CD115 (AFS98), anti-CD150 (TC15-12F12.2, BD Biosciences), anti-CD31 (MEC13.3, Biolegend), anti-CD48 (HM48-1), and anti-CD41 (eBioMWReg30) antibodies. Images were acquired using Olympus Confocal Laser Scanning Biological Microscope FV1000 equipped with four lasers ranging from 405 to 635 nm. Images were processed with ImageJ software.
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