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5 protocols using cd20 pe cy7

1

Purification of Memory B Cells

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Post-Ficoll mononuclear cells from healthy donors were enriched for B cells by magnetic separation with CD19 or CD20 microbeads (Miltenyi Biotech) and stained with CD20-PE-Cy7, CD27-APC (both from Biolegend), CD38-FITC (BD Pharmingen), CD27-APC and IgA-PE (Southern Biotech) prior to purification. Single CD20+CD38dimCD27+IgA+ and CD20+CD38dimCD27−IgA+ memory-B cells were sorted on a FACSAria flow cytometer (BD Biosciences) into 96-well PCR plates and immediately frozen on dry ice.
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2

Multicolor Immunofluorescence Analysis of FFPE Samples

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Formalin-fixed paraffin-embedded (FFPE) 4 µm slides were deparaffinized, rehydrated, and processed for heat-induced antigen retrieval. Samples were then washed with PBS and blocked against nonspecific binding using universal blocking buffer for 1 h at room temperature. Conjugated antibodies CD20/PE-cy7 (Clone 2H7, Biolegend, 1:50, Cat# 302312), BCL6/AF488 (Clone K112-91, BD Biosciences, 1:50, Cat# 561524) and SEMA4A/APC (Clone 5E3, Biolegend, 1:50, Cat# 148406) were diluted in 10% universal blocking buffer (5 µg/ml) and applied for 1 h at room temperature. Samples were then washed with PBS and mounted with antifade media and left to dry overnight at 4 °C. All images were acquired on Nikon A1 confocal microscope and analyzed using Nikon elements NIS.
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3

Sorting of Naïve and Memory B Cells

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B cells were incubated with an antibody cocktail containing L/D marker (eBioscience Fixable Viability Dye eFluor 780) and antibodies CD10 BUV737 (BD #612826), CD20 PECy7 (BioLegend #302312) and CD27 BV711 (BioLegend #302834) and IgD BUV395 (BD #563813) for 30 min at 4°C. Labelled B cells were sorted into naïve (CD10CD20+CD27IgD+) and memory (CD10CD20+CD27+ and CD10CD20+CD27IgD) B cells using the FACSAria™ Fusion sorter (BD Biosciences) (gating strategy shown in Figure S1A).
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4

Tetramer-based Identification and Sorting of B Cells

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B cells were eluted from PBMCs using a MACS Human B Cell isolation kit (Miltenyi Biotec). B cells were stained with rGP38 (IbAr10200) that had been tetramerized at 25 nM using Streptactin-PE (IBA Lifesciences) and Streptactin-APC (IBA Lifesciences). B cells were simultaneously stained with rGP38-Streptactin-PE and rGP38-Streptactin-APC tetramers for 1 hour on ice. Cells were washed twice in buffer (PBS, FBS, EDTA). Next, B cells were stained with a panel of antibodies. Donor 1 PBMCs were stained with a cocktail of anti-human CD3 PerCP-Cy5.5 (Biolegend), CD8 PerCP-Cy5.5 (Biolegend), CD14 PerCP-Cy5.5 (Invitrogen), CD16 PerCP-Cy5.5 (Biolegend), propidium iodide (PI) (Invitrogen), CD19 PE-Cy7 (Biolegend), CD27 BV510 (BD Biosciences), IgM BV711 (BD Biosciences), IgD BV421 (Biolegend), IgG BV605 (BD Biosciences), and IgA AF488 (Abcam). Donor 5 and 6 PBMCs were stained with a cocktail of anti-human CD3 PerCP-Cy5.5 (Biolegend), CD8 PerCP-Cy5.5 (Biolegend), CD14 PerCP-Cy5.5 (Invitrogen), CD16 PerCP-Cy5.5 (Biolegend), PI (Invitrogen), CD19 PE-Cy7 (Biolegend), CD20 PE-Cy7 (Biolegend), CD27 BV510 (BD Biosciences), IgM AF488 (Biolegend), and IgD BV421 (Biolegend). B cells were washed twice in buffer and run on a FACS Aria Fusion Cytometer (BD Biosciences). B cells were sorted into Super Script III reaction buffer (ThermoFisher Scientific) in 96-well Costar plates and frozen at −80 °C.
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5

B-cell Expansion and TGFβ-1 Modulation

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Human B-cells were isolated from healthy donor PBMCs using the Easysep B-cell isolation kit (Stemcell Technologies). Isolated B-cells were cultured in ImmunoCult-XF T-cell Expansion Medium supplemented with ImmunoCult-ACF Human B-cell Expansion Supplement (Stemcell Technologies) for up to 7 days. For cells cultured with TGFβ−1, recombinant human TGFβ−1 (Peprotech, 10ng/mL) was added every day for the duration of the culture. For cells also cultured with SB431542 TGFβ receptor inhibitor, SB431542 (10uM) was 30 minutes before the addition of TGFβ−1.
Cells were labeled with Fixable Cell Proliferation Dye eFluor-450 (eBioscience) or stained with antibodies (all from Biolegend) CD19 PerCP-Cy5.5, CD22 Pacific Blue, CD72 APC, CD38 Alexa-Fluor700, and CD20 Pe-Cy7. In all experiments, cells were first incubated in Fc-Block (Biolegend), and dead cells and debris were excluded from analysis using Fixable Viability Dye eFluor780 (eBioscience). Cells were acquired by BD Symphony and analyzed using the FlowJo software.
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