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36 protocols using prostaglandin e2

1

Succinate, L-161,982, and PGE2 Assay

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Chemicals purchased were: succinate (Sigma Saint Louis, MO, USA; #S3674), L-161,982 (Cayman Chemical, Ann Arbor, MI, USA; #10011565), and prostaglandin E2 (Cayman Chemical; #14010).
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2

Measuring Inflammatory and Oxidative Biomarkers

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Plasma levels of c-reactive protein (CRP) were measured using commercially available ELISA kits (Sigma-Aldrich, St. Louis, Missouri, USA). The levels of 8-isoprostanes, prostaglandin E2 (PGE2), thromboxane B2 (Cayman, Ann Arbour, MI), resolvin E1 (MyBiosource, San Diego, USA), fibrinogen (Abcam, Cambridge, Massachusetts, USA), human CC10/CC16 (MyBiosource, San Diego, USA), (human synonym name for mouse CC16 is CC10), pentraxin 3 (Sigma, St. Louis, USA), Intracellular Adhesion Molecule-1 (RD Systems, Minneapolis, USA), desmosine (MyBiosource, San Diego, USA), NT-proBNP (RD Systems, Minneapolis, USA) and malondialdehyde (MDA) (Cell Biolabs, San Diego, USA) were measured quantitatively by commercially available ELISA kits as per manufacturer’s instructions
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3

Immunomodulatory Effects of PSAB-liposomes and Liraglutide on Dendritic Cells in Type 1 Diabetes

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DCs from patients with T1D (n = 7) were co-cultured with 1 mM PSAB-liposomes (PSAB-DC), 1000 nM Lira (Lira-DC) or combined (PSAB + Lira DC) for 24 h in the presence of 20 μg/ml human insulin (Sigma-Aldrich). DCs were cultured with 20 μg/ml human insulin (Sigma-Aldrich) to obtain immature DCs (iDCs) and adding a cytokine cocktail [1000 IU/ml TNFα and 2000 IU/ml IL-1β (Immunotools) and 1 μM Prostaglandin E2 (Cayman Chemical, Ann Arbor, USA)] to obtain mature DCs (mDC). To assess DCs phenotype, CD25-PE, CD86-FITC, HLA ABC-FITC, HLA DR-FITC, CD14-PE and CD40-APC (Immunotools), CD36-APCCy7, TIM4-APC, CD54-PECy7, TLR2-FITC, CXCR4-APCCy7, CCR2-APC, PD-L1-PECy7, ILT3-PECy7 (Biolegend, San Diego, USA) and CCR7-PECy7 (BD Biosciences) monoclonal antibodies were used to determine their membrane expression. All DCs conditions from the same patient were analysed at the time. All MFI groups were normalized to the MFI of mDCs.
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4

Establishment and Characterization of Human Colon Cancer Organoids

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The establishment and characterization of the human colon cancer organoids has been described [62 (link)]. The organoids were cultured in drops of Geltrex LDEV-Free Reduced Growth Factor Basement Membrane Matrix (Gibco, cat no. A1413202) in DMEM/F12 medium (Thermo), supplemented with 1% (v/v) penicillin/streptomycin (Gibco), 1% Hepes buffer, pH7.5, 1% L-glutamine (Gibco), 1 μg/mL R-spondin (Sigma), 100 ng/mL Noggin (Peprotech), B27 vitamin A-free (Invitrogen, cat no. 12587010), 1 mM n-acetyl cysteine (Sigma), 10 mM nicotinamide (Sigma), 50 ng/mL EGF (BD Biosciences), 500 nM A83-01 (Tocris), 10 μM SB202190 (Sigma), 10 μM Y-27632 (Sigma) and 10 nM Prostaglandin E2 (Cayman). Medium was refreshed every four days and organoids were splitted by treatment with TryPLE Express (Gibco, cat. no. 12604013).
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5

Arachidonic Acid Pathway Modulation

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Arachidonic acid (AA: 5,8,11,14-eicosatetraenoic acid), dexamethasone (DEX: (11β,16α)-9-fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3), naproxen (Nap: (S)-(+)-6-methoxy-α-methyl-2-naphthaleneacetic acid), esculetin (Esc: 6,7-dihydroxycoumarin) and cAMP analogue (8-(4-chlorophenylthio)adenosine 3′,5′-cyclic monophosphate sodium salt) were purchased from Sigma-Aldrich Korea (Seoul, Korea). Prostaglandin D2 (PGD2: 9α,15S-dihydroxy-11-oxo-prosta-5Z,13E-dien-1-oic acid) and prostaglandin E2 (PGE2: 9-oxo-11α,15S-dihydroxy-prosta-5Z,13E-dien-1-oic acid) were purchased from Cayman Chemical (Ann Arbor, MI, USA). PKA inhibitor H89 dihydrochloride (N-2-3-(4-bromophenyl)-2-propenylaminoethyl-5-isoquinolinesulfonamide dihydrochloride) was purchased from Tocris (Bristol, UK). Adenylyl cyclase type V inhibitor (2-amino-7-(furanyl)-7,8-dihydro-5(6H)-quinazolinone) was purchased from Calbiochem (San Diego, CA, USA). All these chemicals were dissolved in dimethyl sulfoxide (DMSO).
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6

Prostanoid Compound Acquisition and Characterization

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15-Deoxy-Δ12,14-prostaglandin J2 (15d-PGJ2), CAY10410 (9,10-dihydro-15-deoxy-Δ12,14-prostaglandin J2), prostaglandin D2, prostaglandin E2, prostaglandin F2α, rosiglitazone, and T0070907 were purchased from Cayman Chemical (Ann Arbor, MI). Prostaglandin A1, prostaglandin J2, 4-cyclopentene-1,3-dione, 2-cyclopentenone, cycloheximide, actinomycin D, indomethacin, buthionine sulfoximine, and N-acetylcysteine and uric acid were from Sigma-Aldrich (St Louis, MO). Cyclopentanone and cyclopentene were obtained from Tokyo Chemical Industry (TCI, Portland, OR). Structures of these prostanoids are shown in Table I. Nigericin, lactacystin, and ultrapure lipopolysaccharide (LPS) were purchased from Calbiochem (San Diego, CA).
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7

Canine Cell Line Culturing and Immune Modulation

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The canine melanoma cell lines CMeC, LMeC, CMM-1, and CMM-232 (link),33 (link), were cultured as described previously6 (link). The canine osteosarcoma cell lines POS34 (link) and HMPOS35 (link) were cultured in RPMI 1640 medium (Sigma-Aldrich, St. Louis, MO) supplemented with 10% fetal calf serum (FCS), 2 mM L-glutamine, 200 μg/mL streptomycin, and 200 U/mL penicillin (Thermo Fisher Scientific) at 37 °C under a 5% CO2 atmosphere. Canine PBMCs were purified from heparinized blood obtained from healthy beagles by density gradient centrifugation on Percoll (GE Healthcare UK, Buckinghamshire, UK) and cultured as described previously6 (link). PBMCs were stimulated with 5 μg/mL Staphylococcal Enterotoxin B (SEB) (Sigma-Aldrich) and 1 μg/mL anti-canine CD28 antibody (eBioscience, San Diego, CA). In some experiments, cells were co-treated with 5 μM meloxicam (Sigma-Aldrich), 2.5 μM Prostaglandin E2 (Cayman Chemical), and/or 20 μg/mL canine chimeric anti-PD-L1 antibody c4G1211 (link) as indicated. The same concentrations of DMSO (Nacalai Tesque, Kyoto, Japan) and dog IgG (Jackson ImmunoResearch, West Grove, PA) were used as negative controls.
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8

Quantifying Pulmonary Prostanoid Levels

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Immediately postmortem, the thoracic cavity was opened and the pulmonary vasculature flushed of blood with PBS via the right ventricle. The right atrium of the heart was then cannulated with PE10 tubing, secured with 5-0 silk, and the lung and heart were removed intact. The pulmonary vasculature was perfused via the right atrium with DMEM media at 37 °C for 20 minutes using a peristaltic pump at 50 μL/min and the venous outflow collected from the left atrium.
Levels of the prostacyclin breakdown product 6-keto PG F1α (6-ketoPGF), the thromboxane breakdown product thromboxane B2, prostaglandin E2, prostaglandin F, prostaglandin D2, 12-HETE, and 15-HETE (Cayman Chemical) were measured in supernatants/plasma by commercial immunoassay. In some cases, tissue/vessel segments were weighed and prostanoid levels expressed relative to tissue mass.
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9

Lipid Mediator Profiling Protocol

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Methanol, acetonitrile (ACN), ethyl acetate, water, formic acid (FA) were acquired from Merck Millipore (Warsaw, Poland). Standards of Thromboxane B2, Leukotriene B4, Prostaglandin D2, Prostaglandin E2, 6-keto Prostaglandin F1α, Prostaglandin F2α, 15-deoxy-Δ12,14-Prostaglandin J2, 13,14-dihydro Prostaglandin E1, and their isotope-labeled standards were procured from Cayman Chemical Company (Ann Arbor, MI, USA).
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10

Modulation of Signaling Pathways in RMF Cells

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RMF, plated in RPMI-1640+10%FBS, were grown for 24 hours in RPMI-1640 without serum prior to the addition of: activin A (Sigma-Aldrich); prostaglandin E2 (Cayman Chemicals); COX-2 inhibitor, NS398 (Cayman Chemicals); Protein Kinase A (PKA) inhibitor, H89 (Sigma-Aldrich); Phosphatidylinositol 3-kinase (PI3K) inhibitor, LY294002 (Sigma-Aldrich); TGF-β Receptor 1 (TGFβR1) inhibitors, LY364947 and SB431542 (Sigma-Aldrich); p38 Mitogen Activated Protein Kinase (p38 MAPK) inhibitor SB203580 (Sigma-Aldrich); and MAPK Kinase (MAPKK) inhibitor, UO126 (Sigma-Aldrich).
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