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10 protocols using dimethyl sulfoxide (dmso)

1

TBI Mice Model: SC560 Neuroprotection

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This investigation conformed to the Guide for the Care and Use of Laboratory Animals
published by the United States National Institutes of Health (Bethesda, MD, USA; NIH
Publication No. 85-23, revised 1996).
C57BL/6J mice (16 weeks old) were randomly divided into 4 groups (n=8/group) as
follows: sham group, mice underwent sham surgery but without actual induction of TBI;
TBI group, mice were injured using the TBI device; vehicle group, TBI mice were
treated with 0.2 mL 20% dimethyl sulfoxide (DMSO; Roche, USA) by intraperitoneal
injection; SC560-treated group, TBI mice received intraperitoneal injection of SC560
(5 mg/kg body weight; Cayman Chemical, USA) every day post-TBI surgery. SC560
(R&D Systems, USA) was dissolved in DMSO and diluted with saline to a final
concentration of 20% (v/v) DMSO.
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2

TGFβ and BMP2 Signaling Pathway Regulation

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For experiments involving growth factor additions, sub-confluent cell layers were first cultured in 1% charcoal-stripped media (Life Technologies, Carlsbad, CA) for 24 h. Some cultures were treated with the TGFβ inhibitor SB431542 at 5 μM for 1 h pre-incubation prior to TGFβ1 treatment, where indicated. Treatment was for 24 h, with vehicle control (DMSO), porcine TGFβ1 (10 ng/ml), or BMP2 (100 ng/ml) (R&D Systems, Minneapolis, MN). Cells were then harvested for protein detection by Western blot and for mRNA levels by qPCR.
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3

Comprehensive Cell Signaling Modulation

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DMSO (R&D Systems, Cat#3176)
Staurosporine (R&D Systems, Cat#1285)
• (R)-(-)-Phenylephrine hydrochloride (R&D Systems, Cat#2838)
Isoproterenol hydrochloride (R&D systems, Cat#1747)
L-ascorbic acid (R&D Systems, Cat#4055)
• (-)-Norepinephrine (Sigma-Aldrich, Cat#A7257)
• Propranolol hydrochloride (R&D Systems, Cat#0624)
• ICI-118,551 (R&D Systems, Cat#0821)
• CGP-20712 (R&D Systems, Cat#1024)
• KN-92 (R&D Systems, Cat#4130)
• KN-93 (R&D Systems, Cat#1278)
Z-DEVD-FMK (R&D Systems, Cat#2166)
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4

Intrathecal Delivery of Therapeutic Agents

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Artesunate (MedChemExpress, HY-N0193, China) was dissolved in 10% dimethyl sulfoxide (DMSO, Sigma-Aldrich, D2650, United States) for i.t. injection. Recombinant CCL21 (Abcam, ab201361, United Kingdom), a neutralizing antibody against CCL21 (anti-CCL21, R&D Systems, AF457, United States) and a neutralizing antibody against TREM2 (anti-TREM2, R&D Systems, 1729-T2, United States), was dissolved in normal saline or 10% DMSO for i.t.; delivery and the doses of these reagents were chosen based on previous reports (Hu et al., 2018 (link); Wang et al., 2020a (link); Zhang et al., 2022 (link)). The intrathecal injection was performed under brief anesthesia of sevoflurane (induction, 3.0%; surgery, 1.5%; Maruishi Pharmaceutical Co., Ltd., Japan) and made between the levels of L5 and L6 using a 30-G needle (Donnelly et al., 2021 (link)); 5 μl of the reagent was given when the reflexive tail flick was observed.
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5

Apoptosis Inhibition via CrmA and DN-FADD

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General caspase inhibitor, Q-VD-OPh, was reconstituted in DMSO (R&D Systems, Minneapolis, MN, USA; OPH001). When used in apoptosis assays, the inhibitor was supplemented to the media at a concentration of 20 μM. 5×105 HT-29 cells were transfected with 1 μg of either the CrmA or DN-FADD plasmid constructs using Effectene (Qiagen, Valencia, CA, USA; 301425). Stable cell lines were generated by selecting with 2 mg/ml Gentamicin (Life Technologies, Carlsbad, CA, USA; 15710-072) for approximately 2 weeks. Gentamicin-resistant cells were maintained under selection pressure until 24 h before treatment.
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6

TGF-β1 Neutralization Modulates IPF Fibroblast Response

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BAL fluid from WT and Akt1−/−Lyz2-cre mice was incubated with TGF-β1 neutralizing antibody (clone #9016) or IgG1 control antibody (clone #11711) (R & D Systems) and then placed on IPF fibroblasts. IPF fibroblasts were incubated with DMSO or SB 431542 (TGF-β type 1 receptor inhibitor) (R & D Systems) and then cultured with BAL fluid from WT and Akt1−/−Lyz2-cre mice.
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7

Recombinant Wnt3a Protein Protocol

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Recombinant mouse Wnt3a protein (RM Wnt3a, 1324-WN) and DMSO were bought from R&D Systems (Minneapolis, MN, USA) (St. Louis, MO, USA). Drug dosages were determined based on prior studies and our preliminary investigations [23 (link)].
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8

Cytokine Response of L2 MVECs to Stimuli

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L2 MVECs were seeded in 6-, 24-, 48-, or 96-well plates at the concentration of 5 × 104 cells/mL. After expanding the cells for 24 h, they were washed with medium and stimulated for 24 h with combinations of murine IFN-γ (20 ng/mL, PeproTech, USA), parasite extract (107 infected red blood cells—iRBCs/mL), murine red blood cells extract (107 RBCs/mL), and dexamethasone (100 nM dissolved in DMSO, Sigma). JNK, p38, and ERK inhibitors (SP600125, SB203580, and FR180204, dissolved in DMSO, R&D, UK) were used at 20, 5, and 10 µM, respectively. After stimulation, plates were centrifuged (5 min, 1,200 rpm, RT) and supernatants were collected for ELISA and stored at −20°C. Cytokines were analyzed by ELISA (R&D). Cells were washed with PBS, lysed with RLT buffer with β-mercaptoethanol from RNeasy Mini kit (Qiagen, Belgium), and stored at −80°C for RNA extraction.
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9

MTT Assay for Cell Viability

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The cultured H9C2 cells were seeded in 96-well culture plates, and after transfection and 1 μM ADR treatment, MTT solution (R&D Systems, Minneapolis, MN, USA) was added to each well. The cells continued to incubate for 4 hours in the incubator, then the supernatant of the 96-well plate was carefully discarded. 150 μL dimethyl sulfoxide (DMSO) (R&D Systems, Minneapolis, MN, USA) was added to each well and shaked for 10 minutes to fully melt the crystals. The activity of myocardial cells was detected, and the absorbance value of each well was measured by enzyme-linked immunoassay (Thermo Fisher Scientific, Waltham, MA, USA).
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10

Recombinant APN Production and Characterization

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Human recombinant APNs (expressed either in Escherichia coli (E.coli) or in human embryonic kidney (HEK) 293 cells) were purchased from Biovendor (Karasek, Czech Republic). AdipoRon hydrochloride and human recombinant IL-4 (produced in E.coli) were acquired from TOCRIS/R&D Systems (Lille, France) and solubilized respectively in DMSO and Roswell Park Memorial Institute 1,640 medium (RPMI). Antibiotics, DMSO, l-glutamine, trypan blue dye, heat-inactivated fetal calf serum and LPS (from E. coli serotype 0111:B4) were purchased from Sigma (St. Louis, MO, United States). High-molecular-weight poly (I:C) was obtained from InvivoGen (Toulouse, France). Bovine serum albumin and RPMI medium were from Eurobio Biotechnology (Les Ulis, France).
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