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5 protocols using non fat blocking grade milk

1

Western Blot Analysis of Cell Signaling Pathways

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Cells were washed with phosphate buffered saline (PBS) and incubated in 100 μl of RIPA cell lysis buffer (Santa Cruz Biotechnology, Inc, Santa Cruz, CA) for 20 minutes. They were then snap-frozen in liquid nitrogen, thawed, and centrifuged at 125g for 10 minutes. The supernatant was collected, and assayed for protein concentration using the spectrophotometric Bradford protein Assay (Bio-Rad). Approximately 30 μg of proteins were electrophoresed in 10% SDS-PAGE gel, and transferred on a nitrocellulose membrane (Bio-Rad). The membrane was blocked with 5% non-fat blocking grade milk (Bio-Rad) and probed with a 1:1000 dilution of primary antibody overnight. The following antibodies were used: G-CSF receptor (Abcam), JAK-2 (Abcam), phospho-JAK2 (Abcam), PI3K (Cell Signaling Technology, Danvers, MA), phospho-PI3K (Cell Signaling Technology), Akt (Cell Signaling Technology), phospho-Akt (Cell Signaling Technology), PDE3B (Abcam), and actin (Santa Cruz Biotechnology). After washing three times, the membranes were probed with a 1:1000 dilution of secondary antibodies (Santa Cruz Biotechnology) for 1 hour at room temperature. The protein bands were visualized with ECL Plus, Chemiluminescence (GE Healthcare and Life Sciences, Piscataway, NJ). The densities were analyzed using Image J Software (Version 1.43u; National Institutes of Health, Bethesda, MD) and normalized to actin.
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2

Western Blot for Protein Expression

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Western blot was performed as previously described.23 Proteins were loaded into SDS‐PAGE gel, and electrophoresis was performed. Then, the proteins were transferred to a nitrocellulose membrane, which was blocked with 5% non‐fat blocking grade milk (Bio‐Rad, Hercules) for 1 hour at room temperature. The membranes were incubated with the primary antibodies overnight at 4°C. The following primary antibodies were used: anti‐TXNIP (1:500; Santa Cruz Biotechnology), anti‐NLRP3 (1:1000; Novus Biologicals, Centennial), anti‐cleaved caspase‐1 (1:1000, Novus Biologicals), anti‐interleukin‐1β (1:1000; Santa Cruz Biotechnology), anti‐TNF‐α (1:500; Santa Cruz Biotechnology) and anti‐interleukin‐6 (1:1000; Santa Cruz Biotechnology). Anti‐β‐actin (1:3000; Santa Cruz Biotechnology) was used as loading control. The membranes were then incubated with appropriate secondary antibodies for 2 hours at room temperature. Immunoreactive bands were visualized with an ECL Plus kit (Amersham Biosciences) followed by exposure to X‐ray films and analysed using ImageJ software (NIH, Bethesda). For PC12 cells, expression of TXNIP and secreted pro‐inflammatory cytokines were measured from 4 separate experiments and normalized to expression of β‐actin in the cell lysate.24
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3

Western Blotting of Inflammation Markers

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Western blotting was performed as previously described (Gamdzyk et al., 2018 (link)). A total of 30 μg protein, from ipsilateral hemisphere, was loaded and separated by 8%-12% SDS-PAGE gel and then transferred onto nitrocellulose membranes (0.45 μm). The membranes were blocked with 5% non-fat blocking grade milk (Bio-Rad, USA), and incubated overnight at 4°C with primary antibodies (anti-FPR2, 1:500, Abcam, USA; anti-NOX2, 1:500, Abcam, USA; anti-Rac1, 1:2000, Abcam, USA; IL-1β, 1:1000, Abcam, USA; TNF-α, 1:500, Abcam, USA; β-actin, 1:2000, Santa Cruz Biotechnology, USA). The next day, membranes were probed with anti-rabbit (or anti-mouse) secondary antibodies (1:3000 Santa Cruz Biotechnology, USA) for 2 h at room temperature. Finally, the bands were developed with ECL Plus kit (Amersham Bioscience, Arlington Heights, IL, USA) and exposed onto an X-ray film. For quantification, gray values were measured and normalized with the control band by Image J software (National Institutes of Health, USA).
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4

Immunoblotting Procedure for Protein Analysis

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Cells and tissues were lysed in radioimmunoprecipitation assay (RIPA) buffer (50 mM Tris–HCl, pH 7.4; 150 mM NaCl; 1% sodium deoxycholate; 1% NP-40; 1% Triton X-100; and complete protease inhibitor cocktail (Roche)). Lysates were clarified by centrifugation, and protein concentration was normalized using Bio-rad protein assay dye reagent. Protein lysates were boiled in SDS sample buffer for 5 min, separated by SDS-PAGE, transferred to PVDF membranes and subjected to immunoblotting procedures. 5% blocking grade non-fat milk (170–6404 from Bio-Rad) in TBST was used for membrane blocking and antibody incubation. 1X western blocking reagent (11 921 673 001 from Roche) in TBST was used for phospho-specific primary antibody incubation. Primary antibodies from Santa Cruz Biotechnology and Developmental Studies Hybridoma Bank were used at 1:100, and all the other primary antibodies were used at 1:1000. HRP-conjugated secondary antibodies were purchased from Bio-Rad and used at 1:2000. Chemiluminescence was detected using LAS4000 (GE) systems.
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5

Immunoblotting for Protein Expression

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Immunoblotting for DOCK8 protein and β-actin was performed as previously described (Zhang et al., 2009 (link)). For analysis of other proteins, cells were lysed in 2% SDS (50 mM Tris HCl, pH 6.8, 10% glycerol) or 1% NP-40 (1 mM EDTA, 50 mM Hepes, and 150 mM NaCl) containing complete protease inhibitors (Roche). Protein lysates were separated on NuPAGE Novex 12% or 4–12% gradient Bis-Tris gels using MOPS SDS or MES running buffers (Life Technologies), followed by wet or semi-dry transfer. Membranes were blocked with 5% blocking grade nonfat milk (Bio-Rad Laboratories) or bløk-CH (Millipore). Antibodies were to caspase-9 (BD); caspase-8 (clone C15; gift from L. Zheng, NIAID, NIH, Bethesda, MD); and PAK1, PAK2, and WASP (Santa Cruz Biotechnology, Inc.).
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