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Uv vis spectrophotometer

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A UV-VIS spectrophotometer is a laboratory instrument that measures the absorption or transmission of light in the ultraviolet and visible regions of the electromagnetic spectrum. It determines the concentration of specific substances in a sample by analyzing the interaction between the sample and light.

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4 protocols using uv vis spectrophotometer

1

Quantifying Aquatic Optical Properties

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Two kinds of domain OACs—phytoplankton and CDOM—in natural water were investigated in our study. They are substituted by using algae species Neochloris oleoabundans obtained from AlgaePARC, and commercial humic acid (Sigma-Aldrich (St. Louis, MO, USA), technical), respectively. The details of how to prepare our aqueous samples are elaborated in the Supplementary Materials.
We designed a low-cost digital setup to measure the water color with known accuracy. Images of the aqueous samples were taken by a digital camera (SONY ILCE-5000L). Through a protocol of light and device calibration, the color indices (xy chromaticity, hue value) were extracted from the pictures. humic acid as a proxy for CDOM was used to test and adjust our setup. A total organic carbon analyzer (TOC-L, Shimadzu) was used to validate humic acid concentration. Further applications were repeated for the algae pigments and validated by UV-VIS spectrophotometer (VWR). The relationship between color indices and algae pigment/humic acid concentrations was then investigated.
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2

Preparation of Inactivated C. sporogenes Spores

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The C. sporogenes spores (ATCC 13732) were purchased from the American Type Culture Collection. 15 μl of the spore suspension was added to 15 ml of Reinforced Clostridial Media (RCM) (Oxoid, England), in petri dishes. An anaerobic chamber was set-up following the protocol of the GasPak™ EZ Anaerobic Container System (Becton, Dickinson and Company, USA). The bacterial culture was placed in the anaerobic chamber and incubated at 37 °C, 5% CO2 for 3 days. The bacterial culture was then harvested from the anaerobic chamber and heat-inactivated by placing it in an 80 °C water bath for 2 hours. After heat-inactivation, the optical density of the bacterial suspension was measured using UV-vis spectrophotometer (VWR, USA) quantify the amount of bacteria present in a 1 ml sample of the culture at 600 nm43 (link). The culture was centrifuged at 2500 g for 20 minutes28 (link) to pellet the bacteria. After the supernatant was discarded, the inactivated bacterial pellet was re-suspended in complete growth media of cancer cells for use in the experiments.
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3

Comprehensive Leaf Biochemical Analysis

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Leaf material used for chlorophyll measurement was protected from light using aluminum foil upon gathering and measured using VWR UV–VIS Spectrophotometer by digesting 0.05 g of frozen leaf material in MgCO3 buffered acetone [42 ]. The remaining leaves were oven dried for 48h, milled using a household coffee grinder, and used for leaf carbon, nitrogen, and micro-nutrients measurements. Carbon and nitrogen content were measured using Perkin Elmer 2400 CHN/O Series II System per manufacturer’s instructions. Leaf micro-nutrients concentration for P, K, Ca, Mg, Mn, Fe, and Zn were obtained using an inductively Coupled Plasma—Optical Emission Spectrometry (Perkin Elmer 8300DV ICP/OES) following open digestion of 200 mg of dried leaf material in a 6 ml nitric acid and hydrogen peroxide solution (1:1 volume). Element recovery rates were determined by digesting and measuring a certified reference material (Apple Leaves NIST® SRM® 1515). Blanks were used during digestion and measurements as negative controls.
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4

Reducing Power of Phenolic Extracts

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The power of phenolic extracts to reduce ferric iron (Fe3+) present in the potassium ferricyanide complex into ferrous iron (Fe2+) was determined according to the method described by Zovko Koncic et al. [68 (link)]. In test tubes, 1 mL of each essential oil of plant was diluted in absolute ethanol at different concentrations (1–20 μL/mL). Then, each tube was mixed with 2.5 mL of a phosphate buffer solution (0.2 M, pH = 6.6) and 2.5 mL of a potassium ferricyanide solution K3Fe(CN)6 at 1%. The obtained solution was incubated in a water bath at 50 °C for 20 min. Then 2.5 mL of 10% trichloroacetic acid was added to stop the reaction processes. The whole solution was centrifuged at 3000 revolutions per minute for 10 min. After, 2.5 mL of the supernatant of each concentration was mixed with 2.5 mL of distilled water, and 0.5 mL of the aqueous FeCl3 solution (0.1%). The absorbance of the reaction medium was measured at 700 nm against a similarly prepared blank, replacing the essential oil with absolute ethanol in order to calibrate the apparatus (UV-VIS spectrophotometer (VWR, Radnor, PA, USA). The positive control was represented by a solution of standard antioxidants; the absorbance of BHA was measured under the same conditions as the samples. An increase in absorbance corresponds to an increase in the reducing power of the tested EOs.
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