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Pcdna3 ha ubiquitin

Manufactured by Addgene
Sourced in United States

PcDNA3 HA-ubiquitin is a plasmid vector that expresses the Hemagglutinin (HA) epitope-tagged ubiquitin protein. Ubiquitin is a small protein involved in the targeted degradation of cellular proteins. The HA tag allows for the detection and purification of ubiquitinated proteins.

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4 protocols using pcdna3 ha ubiquitin

1

Protein Synthesis and Ubiquitination Regulation

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Berberine chloride, protein synthesis inhibitor cycloheximide and proteasome inhibitor MG-132 were purchased from Sigma-aldrich (St. Louis, MO, USA). Plasmid pcDNA3 Cyclin D1-HA (Plasmid 11181) and pcDNA3 Cyclin D1-HA (T286A, Plasmid 11182) were kindly provided by Bruce Zetter (Harvard Medical School, deposited by Addgene, Cambridge, MA, USA); plasmid pcDNA3 HA-ubiquitin (Plasmid 18712) was provided by Edward Yeh (The University of Texas-Houston Health Science Center, deposited by Addgene).
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2

Overexpression and Silencing of PKM2 Isoforms

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pcDNA 3.1 (-) Myc-His-human PKM2, -mouse PKM2, pcDNA 3.1 Flag-human PKM2, -HSP90, pcDNA 3 HA-ubiquitin, and pBABE-bleo IGF-1R (Addgene, Watertown, MA, USA #11212) were used for overexpression experiments. The AccuTarget™ Negative Control siRNA (siCon, Bioneer, Daejeon, Korea), On-TARGET plus non-targeting pool siRNA, and custom-designed siPKM2 (Dharmacon, Lafayette, CO, USA, #D0018101050) were used in the gene-silencing study. The negative and non-targeting pool siRNAs had no significant homology to any known human gene sequences. For the transfection experiments, cDNA vectors and siRNAs were transfected using Lipofectamine® 2000 reagent (Invtrogen, Carlsbad, CA, USA, #11668019) or Lipofectamine® RNA-iMAX (Invitrogen, #13778075), respectively, according to the manufacturer’s instructions. Briefly, Lipofectamine® reagents and cDNA or siRNA (20 nM) were mixed and incubated in Opti-MEM (GIBCO, #31-985-070) at room temperature for 15 min to form transfection complexes. Subsequently, the mixtures were added to each well, and then the cells were further incubated for 48h.
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3

Tagging and Modification of Cell Signaling Proteins

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Mouse Tmem79 was tagged with Myc or Flag or both at the C-terminus. FZD1-10 were tagged with 2xHA or V5 epitope right after the signal peptide. HA-USP8 was generated by PCR-subcloning using Flag-HA-USP8 (Addgene, #22608) as template. V5-FZD5-K0 was generated by site-directed mutagenesis (cytoplasmic lysines 347, 434, 439, 442, 445, 525, 546 and 578 were substituted with arginines). ZNRF3-HA was a gift from Dr. Feng Cong. HA tag in pcDNA3-HA-Ubiquitin (Addgene, #18712) was replaced with 6xHis by PCR cloning to make His-Ubiquitin. Xenopus laevis tmem79 and usp8 cDNAs were PCR amplified from Xenopus stage 10 cDNA library and cloned into pCS2+ vector. SuperTopflash vector 7TFP was obtained from Addgene (#24308). Renilla was PCR amplified from pRL-TK (Promega) and subcloned into lentiviral vector pHage-EF1α. To make lentiviral Top-EGFP reporter plasmid, 7xTCF promoter and EGFP were amplified from 7TFP and pEGFP-N1 (Clontech) vectors, respectively, and subcloned into lentiviral vector pHage.
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4

Plasmid Constructs for p62 Study

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Plasmids used in the studyVectors (cut sites 5′/3′)Inserts (cut sites 5′/3′)
pEGFP-C1-p62pEGFP-C1 (BamHI/EcoRI)p62 (BglII/EcoRI)
pEGFP-C1-p62-1-329aapEGFP-C1 (BamHI/EcoRI)p62 1-329(BglII/EcoRI)
pEGFP-C1-p62-1-370aapEGFP-C1 (BamHI/EcoRI)p62 1-370 (BglII/EcoRI)
pEGFP-C1-p62-121-440 (p62-ΔPB1)pEGFP-C1 (BamHI/EcoRI)p62-121-440 (p62-ΔPB1) (BglII/EcoRI)
pCMV-6M (Myc)-p62pCMV-6M (BamHI/EcoRI)p62 (BglII/EcoRI)
pCMV-6M (Myc)-p62-1-329aapCMV-6M (BamHI/EcoRI)p62 1-329(BglII/EcoRI)
pCMV-6M (Myc)-p62-1-370aapCMV-6M (BamHI/EcoRI)p62 1-370 (BglII/EcoRI)
pmCherry-p62pcDNA3 mCherry (BamHI/EcoRI)p62 (BglII/EcoRI)
pcCMV5c-p62-FlagpCMV-5c (EcoRI/NotI)p62 (EcoRI/NotI)
pET28a-p62pET28a (BamHI/NotI)p62 (BglII/NotI)
pET28a-p62 1-256aapET28a (BamHI/EcoRI)(BamHI/EcoRI)
The correct DNA sequences were confirmed by DNA sequencing. p62-HA (#28027) and pcDNA3 HA-ubiquitin (#18712) were from Addgene.
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