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Odyssey clx analyzer

Manufactured by LI COR

The Odyssey CLx Analyzer is a high-performance infrared imaging system designed for protein and nucleic acid detection and quantification. It utilizes dual-channel infrared fluorescence detection to provide accurate and sensitive results. The Odyssey CLx is capable of scanning a wide range of sample types, including gels, membranes, and microplates.

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2 protocols using odyssey clx analyzer

1

Cytoskeleton Rearrangement in mNVCM after hAFSC Secretome Stimulation

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To investigate mNVCM cytoskeleton re-arrangement following stimulation with the hAFSC secretome over vehicle solution as control, the amount of polymerized F-Actin over monomeric G-Actin was analyzed as indication of cardiomyocyte cell cycle progression (Torrini et al., 2019 (link)). mNVCM were seeded on a 24-well plate as 500.000 cells/well, which were then stimulated by 5 μg/ml hAFSC-EVs (corresponding to 2 μg per well in 400 μl of medium final volume). The F-Actin/G-Actin In Vivo Assay Biochem Kit (Cytoskeleton) was used as per manufacturer’s instructions. mNVCM proteins were boiled with Laemmli SDS sample buffer 6x (VWR International), separated on 4–20% Mini-PROTEAN®TGX™ Precast Gel, and transferred onto a polyvinylidene difluoride (PVDF) membrane with a semi-dry transfer system (all from Bio-Rad). Membrane were incubated with F-Actin/G-Actin antibody provided in the assay and then with IRDye® 800CW goat anti-rabbit secondary antibody (LI-COR Biosciences). Infrared signals were detected using the Odyssey CLx Detection System (LI-COR Biosciences). Quantification was performed using an Odyssey CLx analyzer (LI-COR Biosciences).
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2

Immunoblotting Protein Extraction Protocol

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Cells were harvested, washed in PBS and lysed for 5min on ice in RIPA buffer (25mM Tris pH 7.5, 150mM NaCl, 0.1% SDS, 0.1% sodium deoxycholate, 1% NP40 analog, 1x protease (Cell Signaling) and 1:500 Universal Nuclease (ThermoFisher Scientific). Protein concentration was determined from total cell lysates using DC protein assay (Biorad). Gel electrophoresis was done on Novex Tris-Glycine gels (ThermoFisher Scientific) before transfer using the Trans-Blot Turbo blotting system and nitrocellulose membranes (Biorad). All immunoblotting was performed in Intercept Protein blocking buffer (Licor). Washes were done in TBS + 0.1% Tween-20 (Sigma). Specific primary antibodies were diluted 1:100–1:5000 in blocking buffer. Fluorescent-coupled secondary antibodies were diluted 1:10,000 in blocking buffer. Membranes were imagined with an Odyssey CLx analyzer (Licor) or by chemiluminescence. In a few instances, the same lysates were loaded on parallel gels to avoid antibody cross-reactivity, or because the proteins of interest could not be resolved on the same percentage gels. In these cases, a loading control is provided for all gels, and panels from the same immunoblots are connected with a dotted line on the figure. All raw immunoblots pictures are provided in the supplemental information document.
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