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3 protocols using mouse anti pi 3 4 p2

1

Immunostaining of Myofiber Preparations

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Immunostaining of myofiber preparations was performed as previously described [37 (link)]. Briefly, myofiber preparations were fixed with 4% PFA, for 20 min, permeabilized with PBST (0.3% TritonX in PBS), blocked for 1 hour with PBSTB (5% BSA in PBT) and incubated overnight at 4°C with primary antibodies. The following primary antibodies were used: mouse anti-DHPR (1:200; DHPRa1A; Abcam), mouse anti-α-Actinin (1:100; Sigma), mouse anti-RyR1 (1:100; 34C; DSHB), rabbit anti-Junctin (1:350; gift from Dulhunty lab), mouse anti-PI(3)P (1:100; Echelon Biosciences Inc.), mouse anti-PI(3,4)P2 (1:100; Echelon Biosciences Inc.), mouse anti-PI(4,5)P2 (1:100; Echelon Biosciences Inc.). Alexa Fluor-conjugated secondary antibodies were used at 1:1000 (Invitrogen). Rhodamine phalloidin (Phalloidin 555) was used to visualize filamentous actin (1:300, Molecular Probes). Preparations were mounted with ProLong Gold with DAPI (Invitrogen). Images were acquired with a Nikon Eclipse Ti laser scanning confocal using NIS Elements software (Nikon Corporation, Tokyo, Japan) and only adjusted for brightness and contrast using Adobe Photoshop.
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2

Immunostaining of Myofiber Preparations

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Immunostaining of myofiber preparations was performed as previously described (Horstick et al., 2013) . Briefly, myofiber preparations were fixed with 4% PFA, for 20 min, permeabilized with PBST (0.3% TritonX in PBS), blocked for 1 hour with PBSTB (5% BSA in PBT) and incubated overnight at 4 o C with primary antibodies. The following primary antibodies were used: mouse anti-DHPR (1:200; DHPRa1A; Abcam), mouse anti--Actinin (1:100; Sigma), mouse anti-RyR1 (1:100; 34C; DSHB), rabbit anti-Junctin (1:350; gift from Dulhunty lab), mouse anti-PI(3)P (1:100; Echelon Biosciences Inc.), mouse anti-PI(3,4)P2 (1:100; Echelon Biosciences Inc.), mouse anti-PI(4,5)P2 (1:100; Echelon Biosciences Inc.). Alexa Fluor-conjugated secondary antibodies were used at 1:1000 (Invitrogen). Rhodamine phalloidin (Phalloidin 555) was used to visualize filamentous actin (1:300, Molecular Probes). Preparations were mounted with ProLong Gold with DAPI (Invitrogen). Images were acquired with a Nikon Eclipse Ti laser scanning confocal using NIS Elements software (company, location) and only adjusted for brightness and contrast using Adobe Photoshop.
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3

Immunofluorescence and Lysotracker Microscopy

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The 293T cells were grown in DMEM 10% FBS over coverslips and then fixed in 4% paraformaldehyde for 20 min. Cells were blocked for 1 h in 1% FBS and 0.1% Triton X-100 in PBS and incubated overnight with the primary antibody, mouse anti-PI (3,4) P2 (1:100, # Z-P034B, Echelon Biosciences Inc (Salt Lake city, UT, USA). Anti-rabbit IgG Cy3 (1:200, Jackson Immunoresearch, West Grove, PA, USA) secondary antibodies were used, and DNA was stained with DAPI.
For the Lysotracker assay, U87 and U373 cells were grown in DMEN 10% FBS over coverslips and incubated with LysoTracker Red or LysoTracker Blue (1:500, Invitrogen) for 15 min, washed in PBS, and immediately imaging was done with Leica SP-5 confocal microscope.
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